Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:27:30 (29935): wrapper (7.7.26015): starting
03:27:30 (29935): wrapper: running run_atlas (--nthreads 12)
[2026-05-02 03:27:30] Arguments: --nthreads 12
[2026-05-02 03:27:30] Threads: 12
[2026-05-02 03:27:30] Checking for CVMFS
[2026-05-02 03:27:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 03:27:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 03:27:31] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 03:27:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 03:27:31] 2.11.2.0 14820 368805 87844 159123 1 49 18017065 20275200 1 130560 0 154395987 99.942 17546983 30526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 03:27:31] CVMFS is ok
[2026-05-02 03:27:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 03:27:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 03:27:31] Further information can be found at the LHC@home message board.
[2026-05-02 03:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 03:27:31] Checking for apptainer binary...
[2026-05-02 03:27:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 03:27:31] Running /usr/bin/apptainer --version
[2026-05-02 03:27:31] apptainer version 1.3.2-1.el7
[2026-05-02 03:27:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 03:27:33] c-205-27.aglt2.org
[2026-05-02 03:27:33] apptainer works
[2026-05-02 03:27:33] Set ATHENA_PROC_NUMBER=12
[2026-05-02 03:27:33] Set ATHENA_CORE_NUMBER=12
[2026-05-02 03:27:33] Starting ATLAS job with PandaID=7123454877
[2026-05-02 03:27:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 04:39:08]  *** The last 200 lines of the pilot log: ***
[2026-05-02 04:39:08]  ddmendpoint=NDGF-T1_DATADISK
[2026-05-02 04:39:08]  ddmendpoint_alt=None
[2026-05-02 04:39:08]  direct_access_lan=False
[2026-05-02 04:39:08]  direct_access_wan=False
[2026-05-02 04:39:08]  domain=
[2026-05-02 04:39:08]  filesize=344341
[2026-05-02 04:39:08]  filetype=log
[2026-05-02 04:39:08]  guid=779e86de-8327-4fc1-9449-4f1e16d0a5e6
[2026-05-02 04:39:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-02 04:39:08]  is_altstaged=None
[2026-05-02 04:39:08]  is_tar=False
[2026-05-02 04:39:08]  lfn=log.49263200._089489.job.log.tgz.1
[2026-05-02 04:39:08]  mtime=0
[2026-05-02 04:39:08]  protocol_id=None
[2026-05-02 04:39:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-02 04:39:08]  replicas=None
[2026-05-02 04:39:08]  scope=mc23_13p6TeV
[2026-05-02 04:39:08]  status=None
[2026-05-02 04:39:08]  status_code=0
[2026-05-02 04:39:08]  storage_token=
[2026-05-02 04:39:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7123454877/log.49263200._089489.job.log.tgz.1
[2026-05-02 04:39:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/a3/log.49263200._089489.job.log.tgz.1
[2026-05-02 04:39:08]  workdir=None
[2026-05-02 04:39:08] ]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,305 | INFO     | transferring file log.49263200._089489.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7123454877/log.49263200._089489.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-05-02 04:39:08] 2026-05-02 08:38:47,306 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7123454877/log.49263200._089489.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263200._089489.job
[2026-05-02 04:39:08] 2026-05-02 08:38:47,328 | INFO     | adding to output.list: log.49263200._089489.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/a3/log.49263200._089489.job.log.tg
[2026-05-02 04:39:08] 2026-05-02 08:38:47,329 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-02 04:39:08] 2026-05-02 08:38:47,329 | INFO     | summary of transferred files:
[2026-05-02 04:39:08] 2026-05-02 08:38:47,329 | INFO     |  -- lfn=log.49263200._089489.job.log.tgz.1, status_code=0, status=transferred
[2026-05-02 04:39:08] 2026-05-02 08:38:47,330 | INFO     | stage-out finished correctly
[2026-05-02 04:39:08] 2026-05-02 08:38:47,413 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 04:39:08] 2026-05-02 08:38:47,492 | INFO     | job 7123454877 has state=finished
[2026-05-02 04:39:08] 2026-05-02 08:38:47,493 | INFO     | preparing for final server update for job 7123454877 in state='finished'
[2026-05-02 04:39:08] 2026-05-02 08:38:47,493 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7123454877/jobReport.json
[2026-05-02 04:39:08] 2026-05-02 08:38:47,496 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-02 04:39:08] 2026-05-02 08:38:47,496 | INFO     | this job has now completed (state=finished)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,497 | INFO     | log transfer has been attempted: DONE
[2026-05-02 04:39:08] 2026-05-02 08:38:47,497 | INFO     | job 7123454877 has finished - writing final server update
[2026-05-02 04:39:08] 2026-05-02 08:38:47,497 | INFO     | total number of processed events: 400 (read)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,499 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7123454877/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,499 | INFO     | extracted standard info from prmon json
[2026-05-02 04:39:08] 2026-05-02 08:38:47,499 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 04:39:08] 2026-05-02 08:38:47,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 04:39:08] 2026-05-02 08:38:47,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 04:39:08] 2026-05-02 08:38:47,501 | INFO     | fitting pss+swap vs Time
[2026-05-02 04:39:08] 2026-05-02 08:38:47,501 | INFO     | sum of square deviations: 77515872.0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,502 | INFO     | sum of deviations: -6692666484.000003
[2026-05-02 04:39:08] 2026-05-02 08:38:47,502 | INFO     | mean x (centered): 0.0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,502 | INFO     | mean y: 2868672.873015873
[2026-05-02 04:39:08] 2026-05-02 08:38:47,502 | INFO     | intersect: 2868672.873015873
[2026-05-02 04:39:08] 2026-05-02 08:38:47,502 | INFO     | chi2: 0.06143068976259905
[2026-05-02 04:39:08] 2026-05-02 08:38:47,502 | INFO     | current memory leak: -86.34 B/s (using 63 data points, chi2=0.06)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | ..............................
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . Timing measurements:
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . get job = 0 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . initial setup = 7 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . payload setup = 14 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . stage-in = 0 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . payload execution = 4220 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,503 | INFO     | . stage-out = 0 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,504 | INFO     | . log creation = 0 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,504 | INFO     | ..............................
[2026-05-02 04:39:08] 2026-05-02 08:38:47,580 | INFO     | 
[2026-05-02 04:39:08] 2026-05-02 08:38:47,580 | INFO     | job summary report
[2026-05-02 04:39:08] 2026-05-02 08:38:47,581 | INFO     | --------------------------------------------------
[2026-05-02 04:39:08] 2026-05-02 08:38:47,581 | INFO     | PanDA job id: 7123454877
[2026-05-02 04:39:08] 2026-05-02 08:38:47,581 | INFO     | task id: 49263200
[2026-05-02 04:39:08] 2026-05-02 08:38:47,581 | INFO     | errors: (none)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,581 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 04:39:08] 2026-05-02 08:38:47,581 | INFO     | pilot state: finished 
[2026-05-02 04:39:08] 2026-05-02 08:38:47,582 | INFO     | transexitcode: 0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,582 | INFO     | exeerrorcode: 0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,582 | INFO     | exeerrordiag: 
[2026-05-02 04:39:08] 2026-05-02 08:38:47,582 | INFO     | exitcode: 0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,582 | INFO     | exitmsg: OK
[2026-05-02 04:39:08] 2026-05-02 08:38:47,582 | INFO     | cpuconsumptiontime: 45947 s
[2026-05-02 04:39:08] 2026-05-02 08:38:47,583 | INFO     | nevents: 400
[2026-05-02 04:39:08] 2026-05-02 08:38:47,583 | INFO     | neventsw: 0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,583 | INFO     | pid: 6049
[2026-05-02 04:39:08] 2026-05-02 08:38:47,583 | INFO     | pgrp: 6049
[2026-05-02 04:39:08] 2026-05-02 08:38:47,583 | INFO     | corecount: 12
[2026-05-02 04:39:08] 2026-05-02 08:38:47,583 | INFO     | event service: False
[2026-05-02 04:39:08] 2026-05-02 08:38:47,584 | INFO     | sizes: {0: 2275296, 1: 2277181, 12: 2277181, 4237: 2303275, 4240: 2312467}
[2026-05-02 04:39:08] 2026-05-02 08:38:47,584 | INFO     | --------------------------------------------------
[2026-05-02 04:39:08] 2026-05-02 08:38:47,584 | INFO     | 
[2026-05-02 04:39:08] 2026-05-02 08:38:47,584 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-02 04:39:08] 2026-05-02 08:38:47,607 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,608 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,608 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,608 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,610 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 04:39:08] 2026-05-02 08:38:47,611 | INFO     | job 7123454877 has completed (purged errors)
[2026-05-02 04:39:08] 2026-05-02 08:38:47,611 | INFO     | overall cleanup function is called
[2026-05-02 04:39:08] 2026-05-02 08:38:48,619 | INFO     | --- collectZombieJob: --- 10, [6049]
[2026-05-02 04:39:08] 2026-05-02 08:38:48,619 | INFO     | zombie collector waiting for pid 6049
[2026-05-02 04:39:08] 2026-05-02 08:38:48,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 04:39:08] 2026-05-02 08:38:48,620 | INFO     | collected zombie processes
[2026-05-02 04:39:08] 2026-05-02 08:38:48,620 | INFO     | will attempt to kill all subprocesses of pid=6049
[2026-05-02 04:39:08] 2026-05-02 08:38:48,695 | INFO     | process IDs to be killed: [6049] (in reverse order)
[2026-05-02 04:39:08] 2026-05-02 08:38:48,750 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 04:39:08] 2026-05-02 08:38:48,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 04:39:08] 2026-05-02 08:38:48,753 | INFO     | did not find any defunct processes belonging to 6049
[2026-05-02 04:39:08] 2026-05-02 08:38:48,755 | INFO     | did not find any defunct processes belonging to 6049
[2026-05-02 04:39:08] 2026-05-02 08:38:48,756 | INFO     | Ready for new job
[2026-05-02 04:39:08] 2026-05-02 08:38:48,757 | INFO     | ***************************************
[2026-05-02 04:39:08] 2026-05-02 08:38:48,757 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 04:39:08] 2026-05-02 08:38:48,757 | INFO     | ***************************************
[2026-05-02 04:39:08] 2026-05-02 08:38:48,757 | INFO     | 
[2026-05-02 04:39:08] 2026-05-02 08:38:48,758 | INFO     | architecture information:
[2026-05-02 04:39:08] 2026-05-02 08:38:48,758 | INFO     | executing command: cat /etc/os-release
[2026-05-02 04:39:08] 2026-05-02 08:38:48,774 | INFO     | cat /etc/os-release:
[2026-05-02 04:39:08] NAME="CentOS Linux"
[2026-05-02 04:39:08] VERSION="7 (Core)"
[2026-05-02 04:39:08] ID="centos"
[2026-05-02 04:39:08] ID_LIKE="rhel fedora"
[2026-05-02 04:39:08] VERSION_ID="7"
[2026-05-02 04:39:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 04:39:08] ANSI_COLOR="0;31"
[2026-05-02 04:39:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 04:39:08] HOME_URL="https://www.centos.org/"
[2026-05-02 04:39:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 04:39:08] 
[2026-05-02 04:39:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 04:39:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 04:39:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 04:39:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 04:39:08] 
[2026-05-02 04:39:08] 2026-05-02 08:38:48,774 | INFO     | ***************************************
[2026-05-02 04:39:08] 2026-05-02 08:38:49,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-02 04:39:08] 2026-05-02 08:38:49,295 | INFO     | sufficient remaining disk space (29310844928 B)
[2026-05-02 04:39:08] 2026-05-02 08:38:49,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 04:39:08] 2026-05-02 08:38:49,296 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 04:39:08] 2026-05-02 08:38:49,296 | INFO     | update_server=False
[2026-05-02 04:39:08] 2026-05-02 08:38:49,296 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 04:39:08] 2026-05-02 08:38:49,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 04:39:08] 2026-05-02 08:38:49,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 04:39:08] 2026-05-02 08:38:49,297 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-02 04:39:08] 2026-05-02 08:38:49,297 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 04:39:08] 2026-05-02 08:38:49,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 04:39:08] 2026-05-02 08:38:49,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 04:39:08] 2026-05-02 08:38:49,642 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 04:39:08] 2026-05-02 08:38:49,642 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 04:39:08] 2026-05-02 08:38:49,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 04:39:08] 2026-05-02 08:38:49,642 | INFO     | will abort loop
[2026-05-02 04:39:08] 2026-05-02 08:38:49,702 | INFO     | all payload control threads have been joined
[2026-05-02 04:39:08] 2026-05-02 08:38:50,185 | INFO     | all data control threads have been joined
[2026-05-02 04:39:08] 2026-05-02 08:38:50,301 | INFO     | [job] retrieve thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,302 | INFO     | [job] queue monitor thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 04:39:08] 2026-05-02 08:38:50,502 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,563 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,648 | INFO     | [job] job monitor thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,664 | INFO     | all job control threads have been joined
[2026-05-02 04:39:08] 2026-05-02 08:38:50,706 | INFO     | [payload] control thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,723 | INFO     | [data] copytool_in thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:50,902 | INFO     | [payload] validate_post thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:51,191 | INFO     | [data] control thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:51,249 | INFO     | [job] validate thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:51,561 | INFO     | [payload] failed_post thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:51,669 | INFO     | [job] control thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:51,672 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:51,675 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:52,424 | INFO     | [data] copytool_out thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:38:53,302 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 04:39:08] 2026-05-02 08:39:02,391 | INFO     | [monitor] cgroup control has ended
[2026-05-02 04:39:08] 2026-05-02 08:39:02,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447692232512)>', '<ExcThread(monitor, started 140447041189632)>']
[2026-05-02 04:39:08] 2026-05-02 08:39:03,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 04:39:08] 2026-05-02 08:39:03,367 | INFO     | [monitor] control thread has ended
[2026-05-02 04:39:08] 2026-05-02 08:39:07,907 | INFO     | all workflow threads have been joined
[2026-05-02 04:39:08] 2026-05-02 08:39:07,907 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 04:39:08] 2026-05-02 08:39:07,907 | INFO     | traces error code: 0
[2026-05-02 04:39:08] 2026-05-02 08:39:07,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 04:39:08] 2026-05-02 08:39:07,991 [wrapper] ==== pilot stdout END ====
[2026-05-02 04:39:08] 2026-05-02 08:39:07,995 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 04:39:08] 2026-05-02 08:39:07,999 [wrapper] pilotpid: 1486
[2026-05-02 04:39:08] 2026-05-02 08:39:08,003 [wrapper] Pilot exit status: 0
[2026-05-02 04:39:08] 2026-05-02 08:39:08,020 [wrapper] pandaids: 7123454877
[2026-05-02 04:39:08] 2026-05-02 08:39:08,058 [wrapper] cleanup supervisor_pilot 24526 1487
[2026-05-02 04:39:08] 2026-05-02 08:39:08,061 [wrapper] Test setup, not cleaning
[2026-05-02 04:39:08] 2026-05-02 08:39:08,065 [wrapper] apfmon messages muted
[2026-05-02 04:39:08] 2026-05-02 08:39:08,069 [wrapper] ==== wrapper stdout END ====
[2026-05-02 04:39:08] 2026-05-02 08:39:08,073 [wrapper] ==== wrapper stderr END ====
[2026-05-02 04:39:08]  *** Error codes and diagnostics ***
[2026-05-02 04:39:08]     "exeErrorCode": 0,
[2026-05-02 04:39:08]     "pilotErrorCode": 0,
[2026-05-02 04:39:08]  *** Listing of results directory ***
[2026-05-02 04:39:08] total 414668
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas      5631 May  2 00:04 queuedata.json
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas    683926 May  2 00:04 pilot3.tar.gz
[2026-05-02 04:39:08] -rwx------ 1 boincer umatlas     36322 May  2 00:05 runpilot2-wrapper.sh
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas       100 May  2 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 04:39:08] -rwxr-xr-x 1 boincer umatlas      7986 May  2 03:27 run_atlas
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas       105 May  2 03:27 job.xml
[2026-05-02 04:39:08] -rw-r--r-- 2 boincer umatlas 224238073 May  2 03:27 EVNT.49263198._001956.pool.root.1
[2026-05-02 04:39:08] -rw-r--r-- 2 boincer umatlas     15667 May  2 03:27 start_atlas.sh
[2026-05-02 04:39:08] drwxrwx--x 2 boincer umatlas      4096 May  2 03:27 shared
[2026-05-02 04:39:08] -rw-r--r-- 2 boincer umatlas    697430 May  2 03:27 input.tar.gz
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas         0 May  2 03:27 boinc_lockfile
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas      2574 May  2 03:27 pandaJob.out
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas        57 May  2 03:27 setup.sh.local
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas   1002952 May  2 03:27 agis_schedconf.cvmfs.json
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas   1508687 May  2 03:27 agis_ddmendpoints.agis.ALL.json
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas       445 May  2 03:27 workernode_map.json
[2026-05-02 04:39:08] drwx------ 5 boincer umatlas      4096 May  2 03:27 pilot3
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas      5869 May  2 04:37 init_data.xml
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas       488 May  2 04:38 boinc_task_state.xml
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas 194718515 May  2 04:38 HITS.49263200._089489.pool.root.1
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas      1045 May  2 04:38 memory_monitor_summary.json
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas        27 May  2 04:38 wrapper_checkpoint.txt
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas      8192 May  2 04:38 boinc_mmap_file
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas        95 May  2 04:38 pilot_heartbeat.json
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas    344341 May  2 04:38 log.49263200._089489.job.log.tgz.1
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas      6441 May  2 04:38 heartbeat_new.json
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas      6332 May  2 04:38 heartbeat.json
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas      4737 May  2 04:39 pilotlog.txt
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas    418030 May  2 04:39 log.49263200._089489.job.log.1
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas       357 May  2 04:39 output.list
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas       410 May  2 04:39 runtime_log
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas    778240 May  2 04:39 result.tar.gz
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas      8966 May  2 04:39 runtime_log.err
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas       659 May  2 04:39 77f9668100ca.diag
[2026-05-02 04:39:08] -rw-r--r-- 1 boincer umatlas     20631 May  2 04:39 stderr.txt
[2026-05-02 04:39:08] HITS file was successfully produced:
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas 194718515 May  2 04:38 shared/HITS.pool.root.1
[2026-05-02 04:39:08]  *** Contents of shared directory: ***
[2026-05-02 04:39:08] total 410604
[2026-05-02 04:39:08] -rw-r--r-- 2 boincer umatlas 224238073 May  2 03:27 ATLAS.root_0
[2026-05-02 04:39:08] -rw-r--r-- 2 boincer umatlas     15667 May  2 03:27 start_atlas.sh
[2026-05-02 04:39:08] -rw-r--r-- 2 boincer umatlas    697430 May  2 03:27 input.tar.gz
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas 194718515 May  2 04:38 HITS.pool.root.1
[2026-05-02 04:39:08] -rw------- 1 boincer umatlas    778240 May  2 04:39 result.tar.gz
04:39:09 (29935): run_atlas exited; CPU time 45927.532247
04:39:09 (29935): called boinc_finish(0)

</stderr_txt>
]]>

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