Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
07:43:21 (23895): wrapper (7.7.26015): starting
07:43:21 (23895): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 07:43:21] Arguments: --nthreads 8
[2026-05-02 07:43:21] Threads: 8
[2026-05-02 07:43:21] Checking for CVMFS
[2026-05-02 07:43:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 07:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 07:43:21] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 07:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 07:43:21] 2.11.0.0 4984 291200 79496 159120 0 188 3707944 4096001 3655 130560 4 17472834 99.626 15458481 330 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-02 07:43:21] CVMFS is ok
[2026-05-02 07:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 07:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 07:43:21] Further information can be found at the LHC@home message board.
[2026-05-02 07:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 07:43:21] Checking for apptainer binary...
[2026-05-02 07:43:21] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-02 07:43:21] apptainer is not installed, using version from CVMFS
[2026-05-02 07:43:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 07:43:22] WARNING: Environment variable TMPDIR already has value [/tmp/job_11572862/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node319
[2026-05-02 07:43:22] apptainer works
[2026-05-02 07:43:22] Set ATHENA_PROC_NUMBER=8
[2026-05-02 07:43:22] Set ATHENA_CORE_NUMBER=8
[2026-05-02 07:43:22] Starting ATLAS job with PandaID=7123316399
[2026-05-02 07:43:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11572862/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 08:50:42]  *** The last 200 lines of the pilot log: ***
[2026-05-02 08:50:42]  domain=
[2026-05-02 08:50:42]  filesize=286814
[2026-05-02 08:50:42]  filetype=log
[2026-05-02 08:50:42]  guid=dfc12059-2c88-419b-9795-4dc7d8ce576e
[2026-05-02 08:50:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-02 08:50:42]  is_altstaged=None
[2026-05-02 08:50:42]  is_tar=False
[2026-05-02 08:50:42]  lfn=log.49645815._028054.job.log.tgz.1
[2026-05-02 08:50:42]  mtime=0
[2026-05-02 08:50:42]  protocol_id=None
[2026-05-02 08:50:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-02 08:50:42]  replicas=None
[2026-05-02 08:50:42]  scope=mc23_13p6TeV
[2026-05-02 08:50:42]  status=None
[2026-05-02 08:50:42]  status_code=0
[2026-05-02 08:50:42]  storage_token=
[2026-05-02 08:50:42]  surl=/tmp/job_11572862/atlas/pilot/slots/0/PanDA_Pilot-7123316399/log.49645815._028054.job.log.tgz.1
[2026-05-02 08:50:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/98/log.49645815._028054.job.log.tgz.1
[2026-05-02 08:50:42]  workdir=None
[2026-05-02 08:50:42] ]
[2026-05-02 08:50:42] 2026-05-02 06:49:32,805 | INFO     | transferring file log.49645815._028054.job.log.tgz.1 from /tmp/job_11572862/atlas/pilot/slots/0/PanDA_Pilot-7123316399/log.49645815._028054.job.log.tgz.1 to /tmp/j
[2026-05-02 08:50:42] 2026-05-02 06:49:32,805 | INFO     | executing command: /usr/bin/env mv /tmp/job_11572862/atlas/pilot/slots/0/PanDA_Pilot-7123316399/log.49645815._028054.job.log.tgz.1 /tmp/job_11572862/atlas/pilot/sl
[2026-05-02 08:50:42] 2026-05-02 06:49:32,813 | INFO     | adding to output.list: log.49645815._028054.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/98/log.49645815._028054.job.log.tg
[2026-05-02 08:50:42] 2026-05-02 06:49:32,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-02 08:50:42] 2026-05-02 06:49:32,814 | INFO     | summary of transferred files:
[2026-05-02 08:50:42] 2026-05-02 06:49:32,814 | INFO     |  -- lfn=log.49645815._028054.job.log.tgz.1, status_code=0, status=transferred
[2026-05-02 08:50:42] 2026-05-02 06:49:32,814 | INFO     | stage-out finished correctly
[2026-05-02 08:50:42] 2026-05-02 06:49:32,864 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 08:50:42] 2026-05-02 06:49:34,399 | INFO     | PID=27766 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 08:50:42] 2026-05-02 06:49:34,399 | INFO     | .. there are 3 such processes running
[2026-05-02 08:50:42] 2026-05-02 06:49:35,217 | INFO     | monitor loop #297: job 0:7123316399 is in state 'finished'
[2026-05-02 08:50:42] 2026-05-02 06:49:35,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,573 | INFO     | job 7123316399 has state=finished
[2026-05-02 08:50:42] 2026-05-02 06:49:35,573 | INFO     | preparing for final server update for job 7123316399 in state='finished'
[2026-05-02 08:50:42] 2026-05-02 06:49:35,573 | INFO     | reading metadata from: /tmp/job_11572862/atlas/pilot/slots/0/PanDA_Pilot-7123316399/jobReport.json
[2026-05-02 08:50:42] 2026-05-02 06:49:35,575 | INFO     | added worker_node to metadata from /tmp/job_11572862/atlas/pilot/slots/0/workernode_map.json
[2026-05-02 08:50:42] 2026-05-02 06:49:35,576 | INFO     | this job has now completed (state=finished)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,576 | INFO     | log transfer has been attempted: DONE
[2026-05-02 08:50:42] 2026-05-02 06:49:35,576 | INFO     | job 7123316399 has finished - writing final server update
[2026-05-02 08:50:42] 2026-05-02 06:49:35,576 | INFO     | total number of processed events: 400 (read)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,598 | INFO     | using path: /tmp/job_11572862/atlas/pilot/slots/0/PanDA_Pilot-7123316399/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,598 | INFO     | extracted standard info from prmon json
[2026-05-02 08:50:42] 2026-05-02 06:49:35,598 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 08:50:42] 2026-05-02 06:49:35,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 08:50:42] 2026-05-02 06:49:35,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | fitting pss+swap vs Time
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | sum of square deviations: 60482994.5
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | sum of deviations: -778580911.5
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | mean x (centered): 0.0
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | mean y: 2543551.6379310344
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | intersect: 2543551.6379310344
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | chi2: 0.0046957844637697775
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | current memory leak: -12.87 B/s (using 58 data points, chi2=0.00)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,599 | INFO     | could have reported an average CPU frequency of 2529 MHz (6 samples)
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | ..............................
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . Timing measurements:
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . get job = 0 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . initial setup = 3 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . payload setup = 4 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . stage-in = 0 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . payload execution = 3942 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . stage-out = 0 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | . log creation = 0 s
[2026-05-02 08:50:42] 2026-05-02 06:49:35,600 | INFO     | ..............................
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | 
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | job summary report
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | --------------------------------------------------
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | PanDA job id: 7123316399
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | task id: 49645815
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | errors: (none)
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | pilot state: finished 
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | transexitcode: 0
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | exeerrorcode: 0
[2026-05-02 08:50:42] 2026-05-02 06:49:36,030 | INFO     | exeerrordiag: 
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | exitcode: 0
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | exitmsg: OK
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | cpuconsumptiontime: 29485 s
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | nevents: 400
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | neventsw: 0
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | pid: 32385
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | pgrp: 32385
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | corecount: 8
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | event service: False
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | sizes: {0: 2277283, 11: 2277283, 3951: 2312298, 3954: 2312436}
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | --------------------------------------------------
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | 
[2026-05-02 08:50:42] 2026-05-02 06:49:36,031 | INFO     | executing command: ls -lF /tmp/job_11572862/atlas/pilot/slots/0
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | job 7123316399 has completed (purged errors)
[2026-05-02 08:50:42] 2026-05-02 06:49:36,043 | INFO     | overall cleanup function is called
[2026-05-02 08:50:42] 2026-05-02 06:49:37,049 | INFO     | --- collectZombieJob: --- 10, [32385]
[2026-05-02 08:50:42] 2026-05-02 06:49:37,049 | INFO     | zombie collector waiting for pid 32385
[2026-05-02 08:50:42] 2026-05-02 06:49:37,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 08:50:42] 2026-05-02 06:49:37,049 | INFO     | collected zombie processes
[2026-05-02 08:50:42] 2026-05-02 06:49:37,049 | INFO     | will attempt to kill all subprocesses of pid=32385
[2026-05-02 08:50:42] 2026-05-02 06:49:37,180 | INFO     | process IDs to be killed: [32385] (in reverse order)
[2026-05-02 08:50:42] 2026-05-02 06:49:37,228 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 08:50:42] 2026-05-02 06:49:37,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 08:50:42] 2026-05-02 06:49:37,234 | INFO     | did not find any defunct processes belonging to 32385
[2026-05-02 08:50:42] 2026-05-02 06:49:37,239 | INFO     | did not find any defunct processes belonging to 32385
[2026-05-02 08:50:42] 2026-05-02 06:49:37,239 | INFO     | Ready for new job
[2026-05-02 08:50:42] 2026-05-02 06:49:37,239 | INFO     | ***************************************
[2026-05-02 08:50:42] 2026-05-02 06:49:37,239 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 08:50:42] 2026-05-02 06:49:37,239 | INFO     | ***************************************
[2026-05-02 08:50:42] 2026-05-02 06:49:37,239 | INFO     | 
[2026-05-02 08:50:42] 2026-05-02 06:49:37,255 | INFO     | architecture information:
[2026-05-02 08:50:42] 2026-05-02 06:49:37,255 | INFO     | executing command: cat /etc/os-release
[2026-05-02 08:50:42] 2026-05-02 06:49:37,262 | INFO     | cat /etc/os-release:
[2026-05-02 08:50:42] NAME="CentOS Linux"
[2026-05-02 08:50:42] VERSION="7 (Core)"
[2026-05-02 08:50:42] ID="centos"
[2026-05-02 08:50:42] ID_LIKE="rhel fedora"
[2026-05-02 08:50:42] VERSION_ID="7"
[2026-05-02 08:50:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 08:50:42] ANSI_COLOR="0;31"
[2026-05-02 08:50:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 08:50:42] HOME_URL="https://www.centos.org/"
[2026-05-02 08:50:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 08:50:42] 
[2026-05-02 08:50:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 08:50:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 08:50:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 08:50:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 08:50:42] 
[2026-05-02 08:50:42] 2026-05-02 06:49:37,262 | INFO     | ***************************************
[2026-05-02 08:50:42] 2026-05-02 06:49:37,765 | INFO     | executing command: df -mP /tmp/job_11572862/atlas/pilot/slots/0
[2026-05-02 08:50:42] 2026-05-02 06:49:37,772 | INFO     | sufficient remaining disk space (225315913728 B)
[2026-05-02 08:50:42] 2026-05-02 06:49:37,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 08:50:42] 2026-05-02 06:49:37,772 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 08:50:42] 2026-05-02 06:49:37,772 | INFO     | update_server=False
[2026-05-02 08:50:42] 2026-05-02 06:49:37,772 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 08:50:42] 2026-05-02 06:49:38,038 | INFO     | all job control threads have been joined
[2026-05-02 08:50:42] 2026-05-02 06:49:38,223 | INFO     | all data control threads have been joined
[2026-05-02 08:50:42] 2026-05-02 06:49:38,339 | INFO     | all payload control threads have been joined
[2026-05-02 08:50:42] 2026-05-02 06:49:38,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 08:50:42] 2026-05-02 06:49:38,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:50:42] 2026-05-02 06:49:38,725 | INFO     | aborting loop
[2026-05-02 08:50:42] 2026-05-02 06:49:38,777 | INFO     | [job] retrieve thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:38,784 | INFO     | [job] validate thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:38,806 | INFO     | [data] copytool_in thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:38,817 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:38,828 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:38,857 | INFO     | [payload] failed_post thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:38,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 08:50:42] 2026-05-02 06:49:39,044 | INFO     | [job] control thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:39,229 | INFO     | [data] control thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:39,344 | INFO     | [payload] control thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:39,396 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:39,730 | INFO     | [job] job monitor thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:39,839 | INFO     | [payload] validate_post thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:40,377 | INFO     | [data] copytool_out thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:40,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:50:42] 2026-05-02 06:49:41,663 | INFO     | [job] queue monitor thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:42,920 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:49:48,037 | INFO     | job.realtimelogging is not enabled
[2026-05-02 08:50:42] 2026-05-02 06:49:49,042 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 08:50:42] 2026-05-02 06:50:08,666 | INFO     | PID=27766 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 08:50:42] 2026-05-02 06:50:08,666 | INFO     | .. there are 3 such processes running
[2026-05-02 08:50:42] 2026-05-02 06:50:08,667 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 08:50:42] 2026-05-02 06:50:08,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 08:50:42] 2026-05-02 06:50:08,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 08:50:42] 2026-05-02 06:50:36,682 | INFO     | [monitor] cgroup control has ended
[2026-05-02 08:50:42] 2026-05-02 06:50:37,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067303168)>']
[2026-05-02 08:50:42] 2026-05-02 06:50:37,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 08:50:42] 2026-05-02 06:50:37,807 | INFO     | [monitor] control thread has ended
[2026-05-02 08:50:42] 2026-05-02 06:50:42,317 | INFO     | all workflow threads have been joined
[2026-05-02 08:50:42] 2026-05-02 06:50:42,317 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 08:50:42] 2026-05-02 06:50:42,317 | INFO     | traces error code: 0
[2026-05-02 08:50:42] 2026-05-02 06:50:42,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 08:50:42] 2026-05-02 06:50:42,377 [wrapper] ==== pilot stdout END ====
[2026-05-02 08:50:42] 2026-05-02 06:50:42,378 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 08:50:42] 2026-05-02 06:50:42,380 [wrapper] pilotpid: 27766
[2026-05-02 08:50:42] 2026-05-02 06:50:42,381 [wrapper] Pilot exit status: 0
[2026-05-02 08:50:42] 2026-05-02 06:50:42,385 [wrapper] pandaids: 7123316399
[2026-05-02 08:50:42] 2026-05-02 06:50:42,419 [wrapper] cleanup supervisor_pilot 13607 27767
[2026-05-02 08:50:42] 2026-05-02 06:50:42,420 [wrapper] Test setup, not cleaning
[2026-05-02 08:50:42] 2026-05-02 06:50:42,422 [wrapper] apfmon messages muted
[2026-05-02 08:50:42] 2026-05-02 06:50:42,423 [wrapper] ==== wrapper stdout END ====
[2026-05-02 08:50:42] 2026-05-02 06:50:42,424 [wrapper] ==== wrapper stderr END ====
[2026-05-02 08:50:42]  *** Error codes and diagnostics ***
[2026-05-02 08:50:42]     "exeErrorCode": 0,
[2026-05-02 08:50:42]     "pilotErrorCode": 0,
[2026-05-02 08:50:42]  *** Listing of results directory ***
[2026-05-02 08:50:42] total 417260
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user    683926 May  2 02:25 pilot3.tar.gz
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      5631 May  2 02:26 queuedata.json
[2026-05-02 08:50:42] -rwx------ 1 mf493845 unix-user     36322 May  2 02:26 runpilot2-wrapper.sh
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user       100 May  2 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 08:50:42] -rwxr-xr-x 1 mf493845 unix-user      7986 May  2 06:46 run_atlas
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user       105 May  2 06:46 job.xml
[2026-05-02 08:50:42] -rw-r--r-- 2 mf493845 unix-user     15667 May  2 07:43 start_atlas.sh
[2026-05-02 08:50:42] drwxrwx--x 2 mf493845 unix-user       100 May  2 07:43 shared
[2026-05-02 08:50:42] -rw-r--r-- 2 mf493845 unix-user    697448 May  2 07:43 input.tar.gz
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      6306 May  2 07:43 init_data.xml
[2026-05-02 08:50:42] -rw-r--r-- 2 mf493845 unix-user 223424292 May  2 07:43 EVNT.48629115._000634.pool.root.1
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user         0 May  2 07:43 boinc_setup_complete
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      8192 May  2 07:43 boinc_mmap_file
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user         0 May  2 07:43 boinc_lockfile
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      2630 May  2 07:43 pandaJob.out
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user   1002976 May  2 07:43 agis_schedconf.cvmfs.json
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user   1508687 May  2 07:43 agis_ddmendpoints.agis.ALL.json
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user       418 May  2 07:43 workernode_map.json
[2026-05-02 08:50:42] drwx------ 5 mf493845 unix-user       520 May  2 07:43 pilot3
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user 198342615 May  2 08:49 HITS.49645815._028054.pool.root.1
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      1015 May  2 08:49 memory_monitor_summary.json
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user    286814 May  2 08:49 log.49645815._028054.job.log.tgz.1
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      6332 May  2 08:49 heartbeat_new.json
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      6222 May  2 08:49 heartbeat.json
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user        95 May  2 08:50 pilot_heartbeat.json
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      4906 May  2 08:50 pilotlog.txt
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user    413674 May  2 08:50 log.49645815._028054.job.log.1
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user       357 May  2 08:50 output.list
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user       410 May  2 08:50 runtime_log
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user    716800 May  2 08:50 result.tar.gz
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user      8842 May  2 08:50 runtime_log.err
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user       642 May  2 08:50 44cc034897a4.diag
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user     21584 May  2 08:50 stderr.txt
[2026-05-02 08:50:42] HITS file was successfully produced:
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user 198342615 May  2 08:49 shared/HITS.pool.root.1
[2026-05-02 08:50:42]  *** Contents of shared directory: ***
[2026-05-02 08:50:42] total 413284
[2026-05-02 08:50:42] -rw-r--r-- 2 mf493845 unix-user     15667 May  2 07:43 start_atlas.sh
[2026-05-02 08:50:42] -rw-r--r-- 2 mf493845 unix-user    697448 May  2 07:43 input.tar.gz
[2026-05-02 08:50:42] -rw-r--r-- 2 mf493845 unix-user 223424292 May  2 07:43 ATLAS.root_0
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user 198342615 May  2 08:49 HITS.pool.root.1
[2026-05-02 08:50:42] -rw------- 1 mf493845 unix-user    716800 May  2 08:50 result.tar.gz
08:50:44 (23895): run_atlas exited; CPU time 29567.491149
08:50:44 (23895): called boinc_finish(0)

</stderr_txt>
]]>

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