Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:40 (2051951): wrapper (7.7.26015): starting
09:41:40 (2051951): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 09:41:40] Arguments: --nthreads 4
[2026-05-03 09:41:40] Threads: 4
[2026-05-03 09:41:40] Checking for CVMFS
[2026-05-03 09:41:40] No cvmfs_config command found, will try listing directly
[2026-05-03 09:41:40] CVMFS is ok
[2026-05-03 09:41:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 09:41:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 09:41:40] Further information can be found at the LHC@home message board.
[2026-05-03 09:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 09:41:40] Checking for apptainer binary...
[2026-05-03 09:41:40] which: no apptainer in ((null))
[2026-05-03 09:41:40] apptainer is not installed, using version from CVMFS
[2026-05-03 09:41:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 09:41:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-03 09:41:40] apptainer works
[2026-05-03 09:41:41] Set ATHENA_PROC_NUMBER=4
[2026-05-03 09:41:41] Set ATHENA_CORE_NUMBER=4
[2026-05-03 09:41:41] Starting ATLAS job with PandaID=7123452248
[2026-05-03 09:41:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 13:10:24]  *** The last 200 lines of the pilot log: ***
[2026-05-03 13:10:24] 2026-05-03 10:55:15,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-03 13:10:24] 2026-05-03 10:55:16,171 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 13:10:24] 2026-05-03 10:55:18,027 | INFO     | job 7123452248 has state=finished
[2026-05-03 13:10:24] 2026-05-03 10:55:18,027 | INFO     | preparing for final server update for job 7123452248 in state='finished'
[2026-05-03 13:10:24] 2026-05-03 10:55:18,027 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7123452248/jobReport.json
[2026-05-03 13:10:24] 2026-05-03 10:55:18,030 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/0/workernode_map.json
[2026-05-03 13:10:24] 2026-05-03 10:55:18,030 | INFO     | this job has now completed (state=finished)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,031 | INFO     | log transfer has been attempted: DONE
[2026-05-03 13:10:24] 2026-05-03 10:55:18,031 | INFO     | job 7123452248 has finished - writing final server update
[2026-05-03 13:10:24] 2026-05-03 10:55:18,031 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_888305/.job.ad'
[2026-05-03 13:10:24] 2026-05-03 10:55:18,031 | INFO     | total number of processed events: 400 (read)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,043 | INFO     | using path: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7123452248/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,044 | INFO     | extracted standard info from prmon json
[2026-05-03 13:10:24] 2026-05-03 10:55:18,044 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 13:10:24] 2026-05-03 10:55:18,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 13:10:24] 2026-05-03 10:55:18,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 13:10:24] 2026-05-03 10:55:18,048 | INFO     | fitting pss+swap vs Time
[2026-05-03 13:10:24] 2026-05-03 10:55:18,048 | INFO     | sum of square deviations: 2126802667.5
[2026-05-03 13:10:24] 2026-05-03 10:55:18,049 | INFO     | sum of deviations: 20801636321.49998
[2026-05-03 13:10:24] 2026-05-03 10:55:18,049 | INFO     | mean x (centered): 0.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,049 | INFO     | mean y: 2319416.7421052633
[2026-05-03 13:10:24] 2026-05-03 10:55:18,050 | INFO     | intersect: 2319416.7421052633
[2026-05-03 13:10:24] 2026-05-03 10:55:18,050 | INFO     | chi2: 1.3701115978433227
[2026-05-03 13:10:24] 2026-05-03 10:55:18,050 | INFO     | sum of square deviations: 1963274020.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,051 | INFO     | sum of deviations: 20175243516.999996
[2026-05-03 13:10:24] 2026-05-03 10:55:18,051 | INFO     | mean x (centered): 0.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,052 | INFO     | mean y: 2318832.502702703
[2026-05-03 13:10:24] 2026-05-03 10:55:18,052 | INFO     | intersect: 2318832.502702703
[2026-05-03 13:10:24] 2026-05-03 10:55:18,052 | INFO     | chi2: 1.3710779189915814
[2026-05-03 13:10:24] 2026-05-03 10:55:18,052 | INFO     | current chi2=1.3710779189915814 (change=-0.07052864524172707 %)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,052 | INFO     | right removable region: 184
[2026-05-03 13:10:24] 2026-05-03 10:55:18,052 | INFO     | sum of square deviations: 1963274020.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,053 | INFO     | sum of deviations: -4419007018.000001
[2026-05-03 13:10:24] 2026-05-03 10:55:18,054 | INFO     | mean x (centered): 0.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,054 | INFO     | mean y: 2342634.4432432433
[2026-05-03 13:10:24] 2026-05-03 10:55:18,054 | INFO     | intersect: 2342634.4432432433
[2026-05-03 13:10:24] 2026-05-03 10:55:18,054 | INFO     | chi2: 0.01355524201114215
[2026-05-03 13:10:24] 2026-05-03 10:55:18,054 | INFO     | current chi2=0.01355524201114215 (change=99.01064686756325 %)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,055 | INFO     | sum of square deviations: 1808350185.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | sum of deviations: -3525288575.9999995
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | mean x (centered): 0.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | mean y: 2341750.222222222
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | intersect: 2341750.222222222
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | chi2: 0.013078573624155276
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | current chi2=0.013078573624155276 (change=3.5164874710098286 %)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,056 | INFO     | left removable region: 10
[2026-05-03 13:10:24] 2026-05-03 10:55:18,057 | INFO     | sum of square deviations: 1633472487.5
[2026-05-03 13:10:24] 2026-05-03 10:55:18,058 | INFO     | sum of deviations: -3500752759.4999995
[2026-05-03 13:10:24] 2026-05-03 10:55:18,058 | INFO     | mean x (centered): 0.0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,058 | INFO     | mean y: 2341775.9827586208
[2026-05-03 13:10:24] 2026-05-03 10:55:18,058 | INFO     | intersect: 2341775.9827586208
[2026-05-03 13:10:24] 2026-05-03 10:55:18,058 | INFO     | chi2: 0.012960664411745914
[2026-05-03 13:10:24] 2026-05-03 10:55:18,058 | INFO     | current memory leak: -2.14 B/s (using 174 data points, chi2=0.01)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | could have reported an average CPU frequency of 2560 MHz (10 samples)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | ..............................
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | . Timing measurements:
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | . get job = 0 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | . initial setup = 5 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | . payload setup = 9 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,059 | INFO     | . stage-in = 0 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,060 | INFO     | . payload execution = 11571 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,060 | INFO     | . stage-out = 1 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,060 | INFO     | . log creation = 0 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,060 | INFO     | ..............................
[2026-05-03 13:10:24] 2026-05-03 10:55:18,154 | INFO     | 
[2026-05-03 13:10:24] 2026-05-03 10:55:18,154 | INFO     | job summary report
[2026-05-03 13:10:24] 2026-05-03 10:55:18,154 | INFO     | --------------------------------------------------
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | PanDA job id: 7123452248
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | task id: 49263200
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | errors: (none)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | pilot state: finished 
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | transexitcode: 0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | exeerrorcode: 0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | exeerrordiag: 
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | exitcode: 0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | exitmsg: OK
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | cpuconsumptiontime: 43801 s
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | nevents: 400
[2026-05-03 13:10:24] 2026-05-03 10:55:18,155 | INFO     | neventsw: 0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | pid: 2060622
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | pgrp: 2060622
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | corecount: 4
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | event service: False
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | sizes: {0: 2275540, 1: 2277170, 11: 2277198, 11585: 2306505, 11587: 2315525, 11588: 2315581, 11590: 2315903}
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | --------------------------------------------------
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | 
[2026-05-03 13:10:24] 2026-05-03 10:55:18,156 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/0
[2026-05-03 13:10:24] 2026-05-03 10:55:18,180 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,182 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 13:10:24] 2026-05-03 10:55:18,183 | INFO     | job 7123452248 has completed (purged errors)
[2026-05-03 13:10:24] 2026-05-03 10:55:18,183 | INFO     | overall cleanup function is called
[2026-05-03 13:10:24] 2026-05-03 10:55:19,191 | INFO     | --- collectZombieJob: --- 10, [2060622]
[2026-05-03 13:10:24] 2026-05-03 10:55:19,191 | INFO     | zombie collector waiting for pid 2060622
[2026-05-03 13:10:24] 2026-05-03 10:55:19,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 13:10:24] 2026-05-03 10:55:19,191 | INFO     | collected zombie processes
[2026-05-03 13:10:24] 2026-05-03 10:55:19,192 | INFO     | will attempt to kill all subprocesses of pid=2060622
[2026-05-03 13:10:24] 2026-05-03 10:55:19,506 | INFO     | process IDs to be killed: [2060622] (in reverse order)
[2026-05-03 13:10:24] 2026-05-03 10:55:19,636 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 13:10:24] 2026-05-03 10:55:19,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 13:10:24] 2026-05-03 10:55:19,655 | INFO     | did not find any defunct processes belonging to 2060622
[2026-05-03 13:10:24] 2026-05-03 10:55:19,668 | INFO     | did not find any defunct processes belonging to 2060622
[2026-05-03 13:10:24] 2026-05-03 10:55:19,668 | INFO     | Ready for new job
[2026-05-03 13:10:24] 2026-05-03 10:55:19,670 | INFO     | ***************************************
[2026-05-03 13:10:24] 2026-05-03 10:55:19,670 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 13:10:24] 2026-05-03 10:55:19,670 | INFO     | ***************************************
[2026-05-03 13:10:24] 2026-05-03 10:55:19,671 | INFO     | 
[2026-05-03 13:10:24] 2026-05-03 10:55:19,674 | INFO     | architecture information:
[2026-05-03 13:10:24] 2026-05-03 10:55:19,675 | INFO     | executing command: cat /etc/os-release
[2026-05-03 13:10:24] 2026-05-03 10:55:19,693 | INFO     | cat /etc/os-release:
[2026-05-03 13:10:24] NAME="CentOS Linux"
[2026-05-03 13:10:24] VERSION="7 (Core)"
[2026-05-03 13:10:24] ID="centos"
[2026-05-03 13:10:24] ID_LIKE="rhel fedora"
[2026-05-03 13:10:24] VERSION_ID="7"
[2026-05-03 13:10:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 13:10:24] ANSI_COLOR="0;31"
[2026-05-03 13:10:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 13:10:24] HOME_URL="https://www.centos.org/"
[2026-05-03 13:10:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 13:10:24] 
[2026-05-03 13:10:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 13:10:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 13:10:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 13:10:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 13:10:24] 
[2026-05-03 13:10:24] 2026-05-03 10:55:19,694 | INFO     | ***************************************
[2026-05-03 13:10:24] 2026-05-03 10:55:20,197 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/0
[2026-05-03 13:10:24] 2026-05-03 10:55:20,216 | INFO     | sufficient remaining disk space (53967060992 B)
[2026-05-03 13:10:24] 2026-05-03 10:55:20,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 13:10:24] 2026-05-03 10:55:20,217 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 13:10:24] 2026-05-03 10:55:20,217 | INFO     | update_server=False
[2026-05-03 13:10:24] 2026-05-03 10:55:20,217 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 13:10:24] 2026-05-03 10:55:20,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 13:10:24] 2026-05-03 10:55:20,218 | INFO     | aborting loop
[2026-05-03 13:10:24] 2026-05-03 10:55:20,353 | INFO     | all job control threads have been joined
[2026-05-03 13:10:24] 2026-05-03 10:55:20,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 13:10:24] 2026-05-03 10:55:20,912 | INFO     | all data control threads have been joined
[2026-05-03 13:10:24] 2026-05-03 10:55:20,958 | INFO     | all payload control threads have been joined
[2026-05-03 13:10:24] 2026-05-03 10:55:21,222 | INFO     | [job] retrieve thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,223 | INFO     | [job] job monitor thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,354 | INFO     | [job] control thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,490 | INFO     | [payload] failed_post thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,636 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,650 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,918 | INFO     | [data] control thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:21,963 | INFO     | [payload] control thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:22,033 | INFO     | [data] copytool_in thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:22,266 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 13:10:24] 2026-05-03 10:55:22,272 | INFO     | [job] validate thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:22,458 | INFO     | [payload] validate_post thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:22,536 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:22,670 | INFO     | [data] copytool_out thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:23,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 13:10:24] 2026-05-03 10:55:24,166 | INFO     | [job] queue monitor thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:26,272 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:30,480 | INFO     | job.realtimelogging is not enabled
[2026-05-03 13:10:24] 2026-05-03 10:55:31,485 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 13:10:24] 2026-05-03 10:55:50,164 | INFO     | PID=2055754 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 13:10:24] 2026-05-03 10:55:50,164 | INFO     | .. there are 11 such processes running
[2026-05-03 13:10:24] 2026-05-03 10:55:50,165 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 13:10:24] 2026-05-03 10:55:50,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 13:10:24] 2026-05-03 10:55:50,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 13:10:24] 2026-05-03 10:56:15,594 | INFO     | [monitor] cgroup control has ended
[2026-05-03 13:10:24] 2026-05-03 10:56:17,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23283173156672)>', '<ExcThread(monitor, started 23282866681600)>']
[2026-05-03 13:10:24] 2026-05-03 10:56:17,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 13:10:24] 2026-05-03 10:56:17,293 | INFO     | [monitor] control thread has ended
[2026-05-03 13:10:24] 2026-05-03 10:56:22,164 | INFO     | all workflow threads have been joined
[2026-05-03 13:10:24] 2026-05-03 10:56:22,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 13:10:24] 2026-05-03 10:56:22,165 | INFO     | traces error code: 0
[2026-05-03 13:10:24] 2026-05-03 10:56:22,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 13:10:24] 2026-05-03 10:56:22,333 [wrapper] ==== pilot stdout END ====
[2026-05-03 13:10:24] 2026-05-03 10:56:22,335 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 13:10:24] 2026-05-03 10:56:22,338 [wrapper] pilotpid: 2055754
[2026-05-03 13:10:24] 2026-05-03 10:56:22,341 [wrapper] Pilot exit status: 0
[2026-05-03 13:10:24] 2026-05-03 10:56:22,351 [wrapper] pandaids: 7123452248
[2026-05-03 13:10:24] 2026-05-03 10:56:22,443 [wrapper] cleanup supervisor_pilot 2267935 2055755
[2026-05-03 13:10:24] 2026-05-03 10:56:22,446 [wrapper] Test setup, not cleaning
[2026-05-03 13:10:24] 2026-05-03 10:56:22,448 [wrapper] apfmon messages muted
[2026-05-03 13:10:24] 2026-05-03 10:56:22,451 [wrapper] ==== wrapper stdout END ====
[2026-05-03 13:10:24] 2026-05-03 10:56:22,456 [wrapper] ==== wrapper stderr END ====
[2026-05-03 13:10:24]  *** Error codes and diagnostics ***
[2026-05-03 13:10:24]     "exeErrorCode": 0,
[2026-05-03 13:10:24]     "pilotErrorCode": 0,
[2026-05-03 13:10:24]  *** Listing of results directory ***
[2026-05-03 13:10:24] total 417160
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc    683926 May  2 04:15 pilot3.tar.gz
[2026-05-03 13:10:24] -rwx------. 1 boinc boinc     36322 May  2 04:19 runpilot2-wrapper.sh
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc      5631 May  2 04:19 queuedata.json
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc       100 May  3 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 13:10:24] -rwxr-xr-x. 1 boinc boinc      7986 May  3 09:41 run_atlas
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc       105 May  3 09:41 job.xml
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc      6482 May  3 09:41 init_data.xml
[2026-05-03 13:10:24] -rw-r--r--. 2 boinc boinc 221207973 May  3 09:41 EVNT.49263198._001925.pool.root.1
[2026-05-03 13:10:24] -rw-r--r--. 2 boinc boinc     15667 May  3 09:41 start_atlas.sh
[2026-05-03 13:10:24] drwxrwx--x. 2 boinc boinc      4096 May  3 09:41 shared
[2026-05-03 13:10:24] -rw-r--r--. 2 boinc boinc    697428 May  3 09:41 input.tar.gz
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc         0 May  3 09:41 boinc_lockfile
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc      2577 May  3 09:41 pandaJob.out
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc   1003022 May  3 09:41 agis_schedconf.cvmfs.json
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc       452 May  3 09:41 workernode_map.json
[2026-05-03 13:10:24] drwx------. 5 boinc boinc      4096 May  3 09:41 pilot3
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc 199004925 May  3 12:54 HITS.49263200._088733.pool.root.1
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc       488 May  3 12:54 boinc_task_state.xml
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc      1035 May  3 12:55 memory_monitor_summary.json
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc   1508687 May  3 12:55 agis_ddmendpoints.agis.ALL.json
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc    320486 May  3 12:55 log.49263200._088733.job.log.tgz.1
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc      6430 May  3 12:55 heartbeat_new.json
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc      6321 May  3 12:55 heartbeat.json
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc        95 May  3 12:55 pilot_heartbeat.json
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc      4904 May  3 12:56 pilotlog.txt
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc   1090281 May  3 12:56 log.49263200._088733.job.log.1
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc       357 May  3 12:56 output.list
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc       410 May  3 12:56 runtime_log
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc   1423360 May  3 12:56 result.tar.gz
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc      8828 May  3 12:56 runtime_log.err
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc       665 May  3 12:56 5f1a53ac31f7.diag
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc        27 May  3 13:09 wrapper_checkpoint.txt
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc      8192 May  3 13:10 boinc_mmap_file
[2026-05-03 13:10:24] -rw-r--r--. 1 boinc boinc     21094 May  3 13:10 stderr.txt
[2026-05-03 13:10:24] HITS file was successfully produced:
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc 199004925 May  3 12:54 shared/HITS.pool.root.1
[2026-05-03 13:10:24]  *** Contents of shared directory: ***
[2026-05-03 13:10:24] total 412468
[2026-05-03 13:10:24] -rw-r--r--. 2 boinc boinc 221207973 May  3 09:41 ATLAS.root_0
[2026-05-03 13:10:24] -rw-r--r--. 2 boinc boinc     15667 May  3 09:41 start_atlas.sh
[2026-05-03 13:10:24] -rw-r--r--. 2 boinc boinc    697428 May  3 09:41 input.tar.gz
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc 199004925 May  3 12:54 HITS.pool.root.1
[2026-05-03 13:10:24] -rw-------. 1 boinc boinc   1423360 May  3 12:56 result.tar.gz
13:10:26 (2051951): run_atlas exited; CPU time 44235.396869
13:10:26 (2051951): called boinc_finish(0)

</stderr_txt>
]]>

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