Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:02:02 (157965): wrapper (7.7.26015): starting
21:02:02 (157965): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 21:02:02] Arguments: --nthreads 4
[2026-05-04 21:02:02] Threads: 4
[2026-05-04 21:02:02] Checking for CVMFS
[2026-05-04 21:02:02] No cvmfs_config command found, will try listing directly
[2026-05-04 21:02:02] CVMFS is ok
[2026-05-04 21:02:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 21:02:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 21:02:02] Further information can be found at the LHC@home message board.
[2026-05-04 21:02:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 21:02:02] Checking for apptainer binary...
[2026-05-04 21:02:02] which: no apptainer in ((null))
[2026-05-04 21:02:02] apptainer is not installed, using version from CVMFS
[2026-05-04 21:02:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 21:02:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-04 21:02:02] apptainer works
[2026-05-04 21:02:03] Set ATHENA_PROC_NUMBER=4
[2026-05-04 21:02:03] Set ATHENA_CORE_NUMBER=4
[2026-05-04 21:02:03] Starting ATLAS job with PandaID=7123453173
[2026-05-04 21:02:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 23:55:05]  *** The last 200 lines of the pilot log: ***
[2026-05-04 23:55:05] 2026-05-04 21:54:08,098 | INFO     | intersect: 2301683.564417178
[2026-05-04 23:55:05] 2026-05-04 21:54:08,098 | INFO     | chi2: 1.4364837091901987
[2026-05-04 23:55:05] 2026-05-04 21:54:08,098 | INFO     | current chi2=1.4364837091901987 (change=-0.07773650270581037 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,098 | INFO     | right removable region: 162
[2026-05-04 23:55:05] 2026-05-04 21:54:08,098 | INFO     | sum of square deviations: 1342841922.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,099 | INFO     | sum of deviations: 1019963249.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,099 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,100 | INFO     | mean y: 2329628.4049079753
[2026-05-04 23:55:05] 2026-05-04 21:54:08,100 | INFO     | intersect: 2329628.4049079753
[2026-05-04 23:55:05] 2026-05-04 21:54:08,100 | INFO     | chi2: 0.005432068348955535
[2026-05-04 23:55:05] 2026-05-04 21:54:08,100 | INFO     | current chi2=0.005432068348955535 (change=99.62155567695375 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,100 | INFO     | sum of square deviations: 1223016419.5
[2026-05-04 23:55:05] 2026-05-04 21:54:08,101 | INFO     | sum of deviations: 1193716625.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,101 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,101 | INFO     | mean y: 2329381.911392405
[2026-05-04 23:55:05] 2026-05-04 21:54:08,102 | INFO     | intersect: 2329381.911392405
[2026-05-04 23:55:05] 2026-05-04 21:54:08,102 | INFO     | chi2: 0.002379092542559476
[2026-05-04 23:55:05] 2026-05-04 21:54:08,102 | INFO     | current chi2=0.002379092542559476 (change=56.202823865113515 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,102 | INFO     | sum of square deviations: 1110539892.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,103 | INFO     | sum of deviations: 1954293843.9999995
[2026-05-04 23:55:05] 2026-05-04 21:54:08,103 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,103 | INFO     | mean y: 2328360.1830065357
[2026-05-04 23:55:05] 2026-05-04 21:54:08,103 | INFO     | intersect: 2328360.1830065357
[2026-05-04 23:55:05] 2026-05-04 21:54:08,104 | INFO     | chi2: 0.00024351159905748699
[2026-05-04 23:55:05] 2026-05-04 21:54:08,104 | INFO     | current chi2=0.00024351159905748699 (change=89.76451757544865 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,104 | INFO     | sum of square deviations: 1005179777.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,105 | INFO     | sum of deviations: 1515180921.5000002
[2026-05-04 23:55:05] 2026-05-04 21:54:08,105 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,105 | INFO     | mean y: 2328994.695945946
[2026-05-04 23:55:05] 2026-05-04 21:54:08,105 | INFO     | intersect: 2328994.695945946
[2026-05-04 23:55:05] 2026-05-04 21:54:08,106 | INFO     | chi2: 0.00011324063479246465
[2026-05-04 23:55:05] 2026-05-04 21:54:08,106 | INFO     | current chi2=0.00011324063479246465 (change=53.49682100123232 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,106 | INFO     | sum of square deviations: 906703512.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,107 | INFO     | sum of deviations: 1223605344.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,107 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,107 | INFO     | mean y: 2329443.958041958
[2026-05-04 23:55:05] 2026-05-04 21:54:08,107 | INFO     | intersect: 2329443.958041958
[2026-05-04 23:55:05] 2026-05-04 21:54:08,107 | INFO     | chi2: 5.93833499190485e-05
[2026-05-04 23:55:05] 2026-05-04 21:54:08,107 | INFO     | current chi2=5.93833499190485e-05 (change=47.56003441001548 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,108 | INFO     | sum of square deviations: 814878534.5
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | sum of deviations: 1070571716.0000001
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | mean y: 2329698.115942029
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | intersect: 2329698.115942029
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | chi2: 5.737565723656246e-05
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | current chi2=5.737565723656246e-05 (change=3.3809016925163866 %)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,109 | INFO     | left removable region: 30
[2026-05-04 23:55:05] 2026-05-04 21:54:08,110 | INFO     | sum of square deviations: 713140813.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,110 | INFO     | sum of deviations: 934019677.9999999
[2026-05-04 23:55:05] 2026-05-04 21:54:08,111 | INFO     | mean x (centered): 0.0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,111 | INFO     | mean y: 2329452.3484848486
[2026-05-04 23:55:05] 2026-05-04 21:54:08,111 | INFO     | intersect: 2329452.3484848486
[2026-05-04 23:55:05] 2026-05-04 21:54:08,111 | INFO     | chi2: 5.733820472639243e-05
[2026-05-04 23:55:05] 2026-05-04 21:54:08,111 | INFO     | current memory leak: 1.31 B/s (using 132 data points, chi2=0.00)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | could have reported an average CPU frequency of 2651 MHz (9 samples)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | ..............................
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . Timing measurements:
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . get job = 0 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . initial setup = 11 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . payload setup = 17 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . stage-in = 0 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . payload execution = 10254 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . stage-out = 0 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,112 | INFO     | . log creation = 0 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,113 | INFO     | ..............................
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | 
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | job summary report
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | --------------------------------------------------
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | PanDA job id: 7123453173
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | task id: 49263200
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | errors: (none)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 23:55:05] 2026-05-04 21:54:08,206 | INFO     | pilot state: finished 
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | transexitcode: 0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | exeerrorcode: 0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | exeerrordiag: 
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | exitcode: 0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | exitmsg: OK
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | cpuconsumptiontime: 38730 s
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | nevents: 400
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | neventsw: 0
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | pid: 176165
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | pgrp: 176165
[2026-05-04 23:55:05] 2026-05-04 21:54:08,207 | INFO     | corecount: 4
[2026-05-04 23:55:05] 2026-05-04 21:54:08,208 | INFO     | event service: False
[2026-05-04 23:55:05] 2026-05-04 21:54:08,208 | INFO     | sizes: {0: 2270450, 1: 2272279, 10276: 2301619, 10278: 2310641, 10281: 2310697, 10284: 2310955}
[2026-05-04 23:55:05] 2026-05-04 21:54:08,208 | INFO     | --------------------------------------------------
[2026-05-04 23:55:05] 2026-05-04 21:54:08,208 | INFO     | 
[2026-05-04 23:55:05] 2026-05-04 21:54:08,208 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-05-04 23:55:05] 2026-05-04 21:54:08,242 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,245 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 23:55:05] 2026-05-04 21:54:08,245 | INFO     | job 7123453173 has completed (purged errors)
[2026-05-04 23:55:05] 2026-05-04 21:54:08,245 | INFO     | overall cleanup function is called
[2026-05-04 23:55:05] 2026-05-04 21:54:09,255 | INFO     | --- collectZombieJob: --- 10, [176165]
[2026-05-04 23:55:05] 2026-05-04 21:54:09,255 | INFO     | zombie collector waiting for pid 176165
[2026-05-04 23:55:05] 2026-05-04 21:54:09,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 23:55:05] 2026-05-04 21:54:09,255 | INFO     | collected zombie processes
[2026-05-04 23:55:05] 2026-05-04 21:54:09,255 | INFO     | will attempt to kill all subprocesses of pid=176165
[2026-05-04 23:55:05] 2026-05-04 21:54:09,908 | INFO     | process IDs to be killed: [176165] (in reverse order)
[2026-05-04 23:55:05] 2026-05-04 21:54:10,288 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 23:55:05] 2026-05-04 21:54:10,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 23:55:05] 2026-05-04 21:54:10,321 | INFO     | did not find any defunct processes belonging to 176165
[2026-05-04 23:55:05] 2026-05-04 21:54:10,349 | INFO     | did not find any defunct processes belonging to 176165
[2026-05-04 23:55:05] 2026-05-04 21:54:10,350 | INFO     | Ready for new job
[2026-05-04 23:55:05] 2026-05-04 21:54:10,352 | INFO     | ***************************************
[2026-05-04 23:55:05] 2026-05-04 21:54:10,352 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 23:55:05] 2026-05-04 21:54:10,352 | INFO     | ***************************************
[2026-05-04 23:55:05] 2026-05-04 21:54:10,352 | INFO     | 
[2026-05-04 23:55:05] 2026-05-04 21:54:10,361 | INFO     | architecture information:
[2026-05-04 23:55:05] 2026-05-04 21:54:10,361 | INFO     | executing command: cat /etc/os-release
[2026-05-04 23:55:05] 2026-05-04 21:54:10,385 | INFO     | cat /etc/os-release:
[2026-05-04 23:55:05] NAME="CentOS Linux"
[2026-05-04 23:55:05] VERSION="7 (Core)"
[2026-05-04 23:55:05] ID="centos"
[2026-05-04 23:55:05] ID_LIKE="rhel fedora"
[2026-05-04 23:55:05] VERSION_ID="7"
[2026-05-04 23:55:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 23:55:05] ANSI_COLOR="0;31"
[2026-05-04 23:55:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 23:55:05] HOME_URL="https://www.centos.org/"
[2026-05-04 23:55:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 23:55:05] 
[2026-05-04 23:55:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 23:55:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 23:55:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 23:55:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 23:55:05] 
[2026-05-04 23:55:05] 2026-05-04 21:54:10,385 | INFO     | ***************************************
[2026-05-04 23:55:05] 2026-05-04 21:54:10,888 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-05-04 23:55:05] 2026-05-04 21:54:10,915 | INFO     | sufficient remaining disk space (263024803840 B)
[2026-05-04 23:55:05] 2026-05-04 21:54:10,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 23:55:05] 2026-05-04 21:54:10,916 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 23:55:05] 2026-05-04 21:54:10,916 | INFO     | update_server=False
[2026-05-04 23:55:05] 2026-05-04 21:54:10,916 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 23:55:05] 2026-05-04 21:54:10,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 23:55:05] 2026-05-04 21:54:10,917 | INFO     | aborting loop
[2026-05-04 23:55:05] 2026-05-04 21:54:11,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 23:55:05] 2026-05-04 21:54:11,364 | INFO     | all payload control threads have been joined
[2026-05-04 23:55:05] 2026-05-04 21:54:11,482 | INFO     | all job control threads have been joined
[2026-05-04 23:55:05] 2026-05-04 21:54:11,586 | INFO     | all data control threads have been joined
[2026-05-04 23:55:05] 2026-05-04 21:54:11,922 | INFO     | [job] retrieve thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:11,922 | INFO     | [job] job monitor thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:11,988 | INFO     | [data] copytool_in thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:12,234 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:12,301 | INFO     | [payload] validate_post thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:12,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 23:55:05] 2026-05-04 21:54:12,370 | INFO     | [payload] control thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:12,488 | INFO     | [job] control thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:12,591 | INFO     | [data] control thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:12,979 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:13,001 | INFO     | [payload] failed_post thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:13,089 | INFO     | [job] validate thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:13,202 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:13,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 23:55:05] 2026-05-04 21:54:14,218 | INFO     | [job] queue monitor thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:14,361 | INFO     | [data] copytool_out thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:15,180 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:21,710 | INFO     | job.realtimelogging is not enabled
[2026-05-04 23:55:05] 2026-05-04 21:54:22,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 23:55:05] 2026-05-04 21:54:40,733 | INFO     | PID=166376 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-04 23:55:05] 2026-05-04 21:54:40,733 | INFO     | .. there are 23 such processes running
[2026-05-04 23:55:05] 2026-05-04 21:54:40,735 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 23:55:05] 2026-05-04 21:54:40,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 23:55:05] 2026-05-04 21:54:40,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 23:55:05] 2026-05-04 21:54:59,548 | INFO     | [monitor] cgroup control has ended
[2026-05-04 23:55:05] 2026-05-04 21:54:59,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23009292367680)>', '<ExcThread(monitor, started 23008982816512)>']
[2026-05-04 23:55:05] 2026-05-04 21:54:59,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 23:55:05] 2026-05-04 21:54:59,827 | INFO     | [monitor] control thread has ended
[2026-05-04 23:55:05] 2026-05-04 21:55:04,769 | INFO     | all workflow threads have been joined
[2026-05-04 23:55:05] 2026-05-04 21:55:04,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 23:55:05] 2026-05-04 21:55:04,770 | INFO     | traces error code: 0
[2026-05-04 23:55:05] 2026-05-04 21:55:04,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 23:55:05] 2026-05-04 21:55:04,927 [wrapper] ==== pilot stdout END ====
[2026-05-04 23:55:05] 2026-05-04 21:55:04,931 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 23:55:05] 2026-05-04 21:55:04,936 [wrapper] pilotpid: 166376
[2026-05-04 23:55:05] 2026-05-04 21:55:04,940 [wrapper] Pilot exit status: 0
[2026-05-04 23:55:05] 2026-05-04 21:55:04,961 [wrapper] pandaids: 7123453173
[2026-05-04 23:55:05] 2026-05-04 21:55:05,173 [wrapper] cleanup supervisor_pilot  603769 166377
[2026-05-04 23:55:05] 2026-05-04 21:55:05,178 [wrapper] Test setup, not cleaning
[2026-05-04 23:55:05] 2026-05-04 21:55:05,182 [wrapper] apfmon messages muted
[2026-05-04 23:55:05] 2026-05-04 21:55:05,186 [wrapper] ==== wrapper stdout END ====
[2026-05-04 23:55:05] 2026-05-04 21:55:05,190 [wrapper] ==== wrapper stderr END ====
[2026-05-04 23:55:05]  *** Error codes and diagnostics ***
[2026-05-04 23:55:05]     "exeErrorCode": 0,
[2026-05-04 23:55:05]     "pilotErrorCode": 0,
[2026-05-04 23:55:05]  *** Listing of results directory ***
[2026-05-04 23:55:05] total 413392
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc    683926 May  2 04:15 pilot3.tar.gz
[2026-05-04 23:55:05] -rwx------. 1 boinc boinc     36322 May  2 04:19 runpilot2-wrapper.sh
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc      5631 May  2 04:19 queuedata.json
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc       100 May  4 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 23:55:05] -rwxr-xr-x. 1 boinc boinc      7986 May  4 21:01 run_atlas
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc       105 May  4 21:01 job.xml
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc      6541 May  4 21:02 init_data.xml
[2026-05-04 23:55:05] -rw-r--r--. 2 boinc boinc 221806821 May  4 21:02 EVNT.49263198._001931.pool.root.1
[2026-05-04 23:55:05] drwxrwx--x. 2 boinc boinc      4096 May  4 21:02 shared
[2026-05-04 23:55:05] -rw-r--r--. 2 boinc boinc    697430 May  4 21:02 input.tar.gz
[2026-05-04 23:55:05] -rw-r--r--. 2 boinc boinc     15667 May  4 21:02 start_atlas.sh
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc         0 May  4 21:02 boinc_lockfile
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc      2577 May  4 21:02 pandaJob.out
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc   1002597 May  4 21:02 agis_schedconf.cvmfs.json
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc   1505918 May  4 21:02 agis_ddmendpoints.agis.ALL.json
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc       443 May  4 21:02 workernode_map.json
[2026-05-04 23:55:05] drwx------. 5 boinc boinc      4096 May  4 21:02 pilot3
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc 194800651 May  4 23:53 HITS.49263200._088895.pool.root.1
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc       487 May  4 23:53 boinc_task_state.xml
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc      1027 May  4 23:53 memory_monitor_summary.json
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc    315816 May  4 23:54 log.49263200._088895.job.log.tgz.1
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc      6378 May  4 23:54 heartbeat_new.json
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc      6269 May  4 23:54 heartbeat.json
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc        95 May  4 23:54 pilot_heartbeat.json
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc      8192 May  4 23:54 boinc_mmap_file
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc        27 May  4 23:54 wrapper_checkpoint.txt
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc      4905 May  4 23:55 pilotlog.txt
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc    967563 May  4 23:55 log.49263200._088895.job.log.1
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc       357 May  4 23:55 output.list
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc       410 May  4 23:55 runtime_log
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc   1300480 May  4 23:55 result.tar.gz
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc      8845 May  4 23:55 runtime_log.err
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc       665 May  4 23:55 5f279a1e46e5.diag
[2026-05-04 23:55:05] -rw-r--r--. 1 boinc boinc     20600 May  4 23:55 stderr.txt
[2026-05-04 23:55:05] HITS file was successfully produced:
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc 194800651 May  4 23:53 shared/HITS.pool.root.1
[2026-05-04 23:55:05]  *** Contents of shared directory: ***
[2026-05-04 23:55:05] total 408828
[2026-05-04 23:55:05] -rw-r--r--. 2 boinc boinc 221806821 May  4 21:02 ATLAS.root_0
[2026-05-04 23:55:05] -rw-r--r--. 2 boinc boinc    697430 May  4 21:02 input.tar.gz
[2026-05-04 23:55:05] -rw-r--r--. 2 boinc boinc     15667 May  4 21:02 start_atlas.sh
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc 194800651 May  4 23:53 HITS.pool.root.1
[2026-05-04 23:55:05] -rw-------. 1 boinc boinc   1300480 May  4 23:55 result.tar.gz
23:55:06 (157965): run_atlas exited; CPU time 39318.706995
23:55:06 (157965): called boinc_finish(0)

</stderr_txt>
]]>

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