Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:07:32 (6246): wrapper (7.7.26015): starting
13:07:32 (6246): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 13:07:32] Arguments: --nthreads 8
[2026-05-02 13:07:32] Threads: 8
[2026-05-02 13:07:32] Checking for CVMFS
[2026-05-02 13:07:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 13:07:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 13:07:34] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 13:07:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 13:07:34] 2.11.2.0 17563 24123 102680 159128 1 243 20469527 25165824 616 130560 0 7764351 99.899 6611736 10049 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 13:07:34] CVMFS is ok
[2026-05-02 13:07:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 13:07:34] Checking for apptainer binary...
[2026-05-02 13:07:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 13:07:34] Running /usr/bin/apptainer --version
[2026-05-02 13:07:34] apptainer version 1.3.2-1.el7
[2026-05-02 13:07:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 13:07:36] cg-vwn377.simple-grid.lan
[2026-05-02 13:07:36] apptainer works
[2026-05-02 13:07:36] Set ATHENA_PROC_NUMBER=8
[2026-05-02 13:07:36] Set ATHENA_CORE_NUMBER=8
[2026-05-02 13:07:36] Starting ATLAS job with PandaID=7123379929
[2026-05-02 13:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 16:10:48]  *** The last 200 lines of the pilot log: ***
[2026-05-02 16:10:48] 2026-05-02 14:10:01,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,794 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 16:10:48] 2026-05-02 14:10:02,900 | INFO     | job 7123379929 has state=finished
[2026-05-02 16:10:48] 2026-05-02 14:10:02,900 | INFO     | preparing for final server update for job 7123379929 in state='finished'
[2026-05-02 16:10:48] 2026-05-02 14:10:02,900 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-7123379929/jobReport.json
[2026-05-02 16:10:48] 2026-05-02 14:10:02,903 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-05-02 16:10:48] 2026-05-02 14:10:02,903 | INFO     | this job has now completed (state=finished)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,903 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,904 | INFO     | log transfer has been attempted: DONE
[2026-05-02 16:10:48] 2026-05-02 14:10:02,904 | INFO     | job 7123379929 has finished - writing final server update
[2026-05-02 16:10:48] 2026-05-02 14:10:02,904 | INFO     | total number of processed events: 400 (read)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,906 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7123379929/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,907 | INFO     | extracted standard info from prmon json
[2026-05-02 16:10:48] 2026-05-02 14:10:02,907 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 16:10:48] 2026-05-02 14:10:02,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 16:10:48] 2026-05-02 14:10:02,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 16:10:48] 2026-05-02 14:10:02,912 | INFO     | fitting pss+swap vs Time
[2026-05-02 16:10:48] 2026-05-02 14:10:02,912 | INFO     | sum of square deviations: 1748737904.5
[2026-05-02 16:10:48] 2026-05-02 14:10:02,914 | INFO     | sum of deviations: 24830577497.499996
[2026-05-02 16:10:48] 2026-05-02 14:10:02,914 | INFO     | mean x (centered): 0.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,914 | INFO     | mean y: 2492153.938202247
[2026-05-02 16:10:48] 2026-05-02 14:10:02,914 | INFO     | intersect: 2492153.938202247
[2026-05-02 16:10:48] 2026-05-02 14:10:02,914 | INFO     | chi2: 2.240521245365049
[2026-05-02 16:10:48] 2026-05-02 14:10:02,915 | INFO     | sum of square deviations: 1605470102.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,916 | INFO     | sum of deviations: 24004775936.99998
[2026-05-02 16:10:48] 2026-05-02 14:10:02,916 | INFO     | mean x (centered): 0.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,916 | INFO     | mean y: 2491274.3121387283
[2026-05-02 16:10:48] 2026-05-02 14:10:02,917 | INFO     | intersect: 2491274.3121387283
[2026-05-02 16:10:48] 2026-05-02 14:10:02,917 | INFO     | chi2: 2.2431656649396503
[2026-05-02 16:10:48] 2026-05-02 14:10:02,917 | INFO     | current chi2=2.2431656649396503 (change=-0.11802698055516628 %)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,917 | INFO     | right removable region: 172
[2026-05-02 16:10:48] 2026-05-02 14:10:02,918 | INFO     | sum of square deviations: 1605470102.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,919 | INFO     | sum of deviations: -12939393505.000002
[2026-05-02 16:10:48] 2026-05-02 14:10:02,919 | INFO     | mean x (centered): 0.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,919 | INFO     | mean y: 2532053.023121387
[2026-05-02 16:10:48] 2026-05-02 14:10:02,919 | INFO     | intersect: 2532053.023121387
[2026-05-02 16:10:48] 2026-05-02 14:10:02,919 | INFO     | chi2: 0.16260061194318973
[2026-05-02 16:10:48] 2026-05-02 14:10:02,920 | INFO     | current chi2=0.16260061194318973 (change=92.74273286720398 %)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,920 | INFO     | sum of square deviations: 1470248962.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,921 | INFO     | sum of deviations: -15529996282.999998
[2026-05-02 16:10:48] 2026-05-02 14:10:02,921 | INFO     | mean x (centered): 0.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,921 | INFO     | mean y: 2534910.6904761903
[2026-05-02 16:10:48] 2026-05-02 14:10:02,921 | INFO     | intersect: 2534910.6904761903
[2026-05-02 16:10:48] 2026-05-02 14:10:02,922 | INFO     | chi2: 0.12857492749345328
[2026-05-02 16:10:48] 2026-05-02 14:10:02,922 | INFO     | current chi2=0.12857492749345328 (change=20.925926442161558 %)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,922 | INFO     | left removable region: 10
[2026-05-02 16:10:48] 2026-05-02 14:10:02,922 | INFO     | sum of square deviations: 1318277740.5
[2026-05-02 16:10:48] 2026-05-02 14:10:02,923 | INFO     | sum of deviations: -15164422063.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,923 | INFO     | mean x (centered): 0.0
[2026-05-02 16:10:48] 2026-05-02 14:10:02,924 | INFO     | mean y: 2535350.160493827
[2026-05-02 16:10:48] 2026-05-02 14:10:02,924 | INFO     | intersect: 2535350.160493827
[2026-05-02 16:10:48] 2026-05-02 14:10:02,924 | INFO     | chi2: 0.1267145479379178
[2026-05-02 16:10:48] 2026-05-02 14:10:02,924 | INFO     | current memory leak: -11.50 B/s (using 162 data points, chi2=0.13)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,925 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-02 16:10:48] 2026-05-02 14:10:02,925 | INFO     | ..............................
[2026-05-02 16:10:48] 2026-05-02 14:10:02,925 | INFO     | . Timing measurements:
[2026-05-02 16:10:48] 2026-05-02 14:10:02,925 | INFO     | . get job = 0 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,925 | INFO     | . initial setup = 10 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,926 | INFO     | . payload setup = 28 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,926 | INFO     | . stage-in = 0 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,926 | INFO     | . payload execution = 10860 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,926 | INFO     | . stage-out = 1 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,926 | INFO     | . log creation = 0 s
[2026-05-02 16:10:48] 2026-05-02 14:10:02,926 | INFO     | ..............................
[2026-05-02 16:10:48] 2026-05-02 14:10:03,260 | INFO     | 
[2026-05-02 16:10:48] 2026-05-02 14:10:03,260 | INFO     | job summary report
[2026-05-02 16:10:48] 2026-05-02 14:10:03,260 | INFO     | --------------------------------------------------
[2026-05-02 16:10:48] 2026-05-02 14:10:03,260 | INFO     | PanDA job id: 7123379929
[2026-05-02 16:10:48] 2026-05-02 14:10:03,260 | INFO     | task id: 49645815
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | errors: (none)
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | pilot state: finished 
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | transexitcode: 0
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | exeerrorcode: 0
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | exeerrordiag: 
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | exitcode: 0
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | exitmsg: OK
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | cpuconsumptiontime: 69897 s
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | nevents: 400
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | neventsw: 0
[2026-05-02 16:10:48] 2026-05-02 14:10:03,261 | INFO     | pid: 17148
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | pgrp: 17148
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | corecount: 8
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | event service: False
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | sizes: {0: 2274749, 1: 2277235, 2: 2277235, 10892: 2306369, 10895: 2315367, 10897: 2315745}
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | --------------------------------------------------
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | 
[2026-05-02 16:10:48] 2026-05-02 14:10:03,262 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 16:10:48] 2026-05-02 14:10:03,291 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,294 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 16:10:48] 2026-05-02 14:10:03,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 16:10:48] 2026-05-02 14:10:03,294 | INFO     | job 7123379929 has completed (purged errors)
[2026-05-02 16:10:48] 2026-05-02 14:10:03,294 | INFO     | overall cleanup function is called
[2026-05-02 16:10:48] 2026-05-02 14:10:04,299 | INFO     | --- collectZombieJob: --- 10, [17148]
[2026-05-02 16:10:48] 2026-05-02 14:10:04,299 | INFO     | zombie collector waiting for pid 17148
[2026-05-02 16:10:48] 2026-05-02 14:10:04,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 16:10:48] 2026-05-02 14:10:04,300 | INFO     | collected zombie processes
[2026-05-02 16:10:48] 2026-05-02 14:10:04,300 | INFO     | will attempt to kill all subprocesses of pid=17148
[2026-05-02 16:10:48] 2026-05-02 14:10:04,353 | INFO     | process IDs to be killed: [17148] (in reverse order)
[2026-05-02 16:10:48] 2026-05-02 14:10:04,407 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 16:10:48] 2026-05-02 14:10:04,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 16:10:48] 2026-05-02 14:10:04,410 | INFO     | did not find any defunct processes belonging to 17148
[2026-05-02 16:10:48] 2026-05-02 14:10:04,412 | INFO     | did not find any defunct processes belonging to 17148
[2026-05-02 16:10:48] 2026-05-02 14:10:04,412 | INFO     | Ready for new job
[2026-05-02 16:10:48] 2026-05-02 14:10:04,414 | INFO     | ***************************************
[2026-05-02 16:10:48] 2026-05-02 14:10:04,414 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 16:10:48] 2026-05-02 14:10:04,414 | INFO     | ***************************************
[2026-05-02 16:10:48] 2026-05-02 14:10:04,414 | INFO     | 
[2026-05-02 16:10:48] 2026-05-02 14:10:04,415 | INFO     | pilot is running in a VM
[2026-05-02 16:10:48] 2026-05-02 14:10:04,415 | INFO     | architecture information:
[2026-05-02 16:10:48] 2026-05-02 14:10:04,415 | INFO     | executing command: cat /etc/os-release
[2026-05-02 16:10:48] 2026-05-02 14:10:04,438 | INFO     | cat /etc/os-release:
[2026-05-02 16:10:48] NAME="CentOS Linux"
[2026-05-02 16:10:48] VERSION="7 (Core)"
[2026-05-02 16:10:48] ID="centos"
[2026-05-02 16:10:48] ID_LIKE="rhel fedora"
[2026-05-02 16:10:48] VERSION_ID="7"
[2026-05-02 16:10:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 16:10:48] ANSI_COLOR="0;31"
[2026-05-02 16:10:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 16:10:48] HOME_URL="https://www.centos.org/"
[2026-05-02 16:10:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 16:10:48] 
[2026-05-02 16:10:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 16:10:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 16:10:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 16:10:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 16:10:48] 
[2026-05-02 16:10:48] 2026-05-02 14:10:04,439 | INFO     | ***************************************
[2026-05-02 16:10:48] 2026-05-02 14:10:04,942 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 16:10:48] 2026-05-02 14:10:04,961 | INFO     | sufficient remaining disk space (497680384000 B)
[2026-05-02 16:10:48] 2026-05-02 14:10:04,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 16:10:48] 2026-05-02 14:10:04,962 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 16:10:48] 2026-05-02 14:10:04,962 | INFO     | update_server=False
[2026-05-02 16:10:48] 2026-05-02 14:10:04,962 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 16:10:48] 2026-05-02 14:10:04,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 16:10:48] 2026-05-02 14:10:04,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 16:10:48] 2026-05-02 14:10:05,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 16:10:48] 2026-05-02 14:10:05,086 | INFO     | aborting loop
[2026-05-02 16:10:48] 2026-05-02 14:10:05,791 | INFO     | all payload control threads have been joined
[2026-05-02 16:10:48] 2026-05-02 14:10:05,825 | INFO     | all data control threads have been joined
[2026-05-02 16:10:48] 2026-05-02 14:10:05,968 | INFO     | [job] retrieve thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:05,969 | INFO     | [job] queue monitor thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:05,998 | INFO     | [data] copytool_in thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,090 | INFO     | [job] job monitor thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,110 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,180 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 16:10:48] 2026-05-02 14:10:06,586 | INFO     | all job control threads have been joined
[2026-05-02 16:10:48] 2026-05-02 14:10:06,723 | INFO     | [job] validate thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,793 | INFO     | [payload] validate_post thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,797 | INFO     | [payload] control thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:06,830 | INFO     | [data] control thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:07,096 | INFO     | [payload] failed_post thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:07,465 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:07,592 | INFO     | [job] control thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:08,190 | INFO     | [data] copytool_out thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:08,969 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:15,112 | INFO     | job.realtimelogging is not enabled
[2026-05-02 16:10:48] 2026-05-02 14:10:16,118 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 16:10:48] 2026-05-02 14:10:35,382 | INFO     | PID=11313 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 16:10:48] 2026-05-02 14:10:35,382 | INFO     | .. there are 2 such processes running
[2026-05-02 16:10:48] 2026-05-02 14:10:35,384 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 16:10:48] 2026-05-02 14:10:35,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 16:10:48] 2026-05-02 14:10:35,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 16:10:48] 2026-05-02 14:10:42,236 | INFO     | [monitor] cgroup control has ended
[2026-05-02 16:10:48] 2026-05-02 14:10:43,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973216540480)>', '<ExcThread(monitor, started 139972556343040)>']
[2026-05-02 16:10:48] 2026-05-02 14:10:43,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 16:10:48] 2026-05-02 14:10:43,424 | INFO     | [monitor] control thread has ended
[2026-05-02 16:10:48] 2026-05-02 14:10:48,338 | INFO     | all workflow threads have been joined
[2026-05-02 16:10:48] 2026-05-02 14:10:48,338 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 16:10:48] 2026-05-02 14:10:48,339 | INFO     | traces error code: 0
[2026-05-02 16:10:48] 2026-05-02 14:10:48,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 16:10:48] 2026-05-02 14:10:48,499 [wrapper] ==== pilot stdout END ====
[2026-05-02 16:10:48] 2026-05-02 14:10:48,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 16:10:48] 2026-05-02 14:10:48,513 [wrapper] pilotpid: 11313
[2026-05-02 16:10:48] 2026-05-02 14:10:48,519 [wrapper] Pilot exit status: 0
[2026-05-02 16:10:48] 2026-05-02 14:10:48,548 [wrapper] pandaids: 7123379929
[2026-05-02 16:10:48] 2026-05-02 14:10:48,582 [wrapper] cleanup supervisor_pilot 29429 11314
[2026-05-02 16:10:48] 2026-05-02 14:10:48,587 [wrapper] Test setup, not cleaning
[2026-05-02 16:10:48] 2026-05-02 14:10:48,601 [wrapper] apfmon messages muted
[2026-05-02 16:10:48] 2026-05-02 14:10:48,611 [wrapper] ==== wrapper stdout END ====
[2026-05-02 16:10:48] 2026-05-02 14:10:48,615 [wrapper] ==== wrapper stderr END ====
[2026-05-02 16:10:48]  *** Error codes and diagnostics ***
[2026-05-02 16:10:48]     "exeErrorCode": 0,
[2026-05-02 16:10:48]     "pilotErrorCode": 0,
[2026-05-02 16:10:48]  *** Listing of results directory ***
[2026-05-02 16:10:48] total 417412
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc    683926 May  2 04:15 pilot3.tar.gz
[2026-05-02 16:10:48] -rwx------. 1 boinc boinc     36322 May  2 04:17 runpilot2-wrapper.sh
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc      5631 May  2 04:17 queuedata.json
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc       100 May  2 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 16:10:48] -rwxr-xr-x. 1 boinc boinc      7986 May  2 13:07 run_atlas
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc       105 May  2 13:07 job.xml
[2026-05-02 16:10:48] -rw-r--r--. 2 boinc boinc 222402679 May  2 13:07 EVNT.48629115._000690.pool.root.1
[2026-05-02 16:10:48] -rw-r--r--. 2 boinc boinc     15667 May  2 13:07 start_atlas.sh
[2026-05-02 16:10:48] drwxrwx--x. 2 boinc boinc        68 May  2 13:07 shared
[2026-05-02 16:10:48] -rw-r--r--. 2 boinc boinc    697445 May  2 13:07 input.tar.gz
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc      6307 May  2 13:07 init_data.xml
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc         0 May  2 13:07 boinc_lockfile
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc      2630 May  2 13:07 pandaJob.out
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc   1002992 May  2 13:08 agis_schedconf.cvmfs.json
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc       415 May  2 13:08 workernode_map.json
[2026-05-02 16:10:48] drwx------. 5 boinc boinc      4096 May  2 13:08 pilot3
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc 198132544 May  2 16:09 HITS.49645815._029545.pool.root.1
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc       488 May  2 16:09 boinc_task_state.xml
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc      1015 May  2 16:09 memory_monitor_summary.json
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc   1508687 May  2 16:09 agis_ddmendpoints.agis.ALL.json
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc    356314 May  2 16:10 log.49645815._029545.job.log.tgz.1
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc      6342 May  2 16:10 heartbeat_new.json
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc      6233 May  2 16:10 heartbeat.json
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc      8192 May  2 16:10 boinc_mmap_file
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc        28 May  2 16:10 wrapper_checkpoint.txt
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc        95 May  2 16:10 pilot_heartbeat.json
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc      4955 May  2 16:10 pilotlog.txt
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc   1030402 May  2 16:10 log.49645815._029545.job.log.1
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc       357 May  2 16:10 output.list
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc       410 May  2 16:10 runtime_log
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc   1402880 May  2 16:10 result.tar.gz
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc      8439 May  2 16:10 runtime_log.err
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc       655 May  2 16:10 5ea04f93d357.diag
[2026-05-02 16:10:48] -rw-r--r--. 1 boinc boinc     20842 May  2 16:10 stderr.txt
[2026-05-02 16:10:48] HITS file was successfully produced:
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc 198132544 May  2 16:09 shared/HITS.pool.root.1
[2026-05-02 16:10:48]  *** Contents of shared directory: ***
[2026-05-02 16:10:48] total 412756
[2026-05-02 16:10:48] -rw-r--r--. 2 boinc boinc 222402679 May  2 13:07 ATLAS.root_0
[2026-05-02 16:10:48] -rw-r--r--. 2 boinc boinc     15667 May  2 13:07 start_atlas.sh
[2026-05-02 16:10:48] -rw-r--r--. 2 boinc boinc    697445 May  2 13:07 input.tar.gz
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc 198132544 May  2 16:09 HITS.pool.root.1
[2026-05-02 16:10:48] -rw-------. 1 boinc boinc   1402880 May  2 16:10 result.tar.gz
16:10:50 (6246): run_atlas exited; CPU time 69981.063869
16:10:50 (6246): called boinc_finish(0)

</stderr_txt>
]]>

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