Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:38:57 (2547340): wrapper (7.7.26015): starting
22:38:57 (2547340): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 22:38:57] Arguments: --nthreads 4
[2026-05-03 22:38:57] Threads: 4
[2026-05-03 22:38:57] Checking for CVMFS
[2026-05-03 22:38:57] No cvmfs_config command found, will try listing directly
[2026-05-03 22:38:57] CVMFS is ok
[2026-05-03 22:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 22:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 22:38:57] Further information can be found at the LHC@home message board.
[2026-05-03 22:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 22:38:57] Checking for apptainer binary...
[2026-05-03 22:38:57] which: no apptainer in ((null))
[2026-05-03 22:38:57] apptainer is not installed, using version from CVMFS
[2026-05-03 22:38:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 22:38:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-03 22:38:57] apptainer works
[2026-05-03 22:38:57] Set ATHENA_PROC_NUMBER=4
[2026-05-03 22:38:57] Set ATHENA_CORE_NUMBER=4
[2026-05-03 22:38:57] Starting ATLAS job with PandaID=7123338971
[2026-05-03 22:38:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:46:13 (2804400): wrapper (7.7.26015): starting
01:46:13 (2804400): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 01:46:13] Arguments: --nthreads 4
[2026-05-04 01:46:13] Threads: 4
[2026-05-04 01:46:13] This job has been restarted, cleaning up previous attempt
[2026-05-04 01:46:13] Checking for CVMFS
[2026-05-04 01:46:13] No cvmfs_config command found, will try listing directly
[2026-05-04 01:46:13] CVMFS is ok
[2026-05-04 01:46:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 01:46:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 01:46:13] Further information can be found at the LHC@home message board.
[2026-05-04 01:46:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 01:46:13] Checking for apptainer binary...
[2026-05-04 01:46:13] which: no apptainer in ((null))
[2026-05-04 01:46:13] apptainer is not installed, using version from CVMFS
[2026-05-04 01:46:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 01:46:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-04 01:46:13] apptainer works
[2026-05-04 01:46:13] Set ATHENA_PROC_NUMBER=4
[2026-05-04 01:46:13] Set ATHENA_CORE_NUMBER=4
[2026-05-04 01:46:13] Starting ATLAS job with PandaID=7123338971
[2026-05-04 01:46:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 04:56:45]  *** The last 200 lines of the pilot log: ***
[2026-05-04 04:56:45] 2026-05-04 02:56:04,590 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7123338971/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,591 | INFO     | extracted standard info from prmon json
[2026-05-04 04:56:45] 2026-05-04 02:56:04,591 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 04:56:45] 2026-05-04 02:56:04,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 04:56:45] 2026-05-04 02:56:04,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 04:56:45] 2026-05-04 02:56:04,595 | INFO     | fitting pss+swap vs Time
[2026-05-04 04:56:45] 2026-05-04 02:56:04,596 | INFO     | sum of square deviations: 2027639878.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,597 | INFO     | sum of deviations: 6773699921.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,597 | INFO     | mean x (centered): 0.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,597 | INFO     | mean y: 2303206.2673796793
[2026-05-04 04:56:45] 2026-05-04 02:56:04,597 | INFO     | intersect: 2303206.2673796793
[2026-05-04 04:56:45] 2026-05-04 02:56:04,598 | INFO     | chi2: 1.9275163063148448
[2026-05-04 04:56:45] 2026-05-04 02:56:04,598 | INFO     | sum of square deviations: 1869302025.5
[2026-05-04 04:56:45] 2026-05-04 02:56:04,600 | INFO     | sum of deviations: 18127427065.5
[2026-05-04 04:56:45] 2026-05-04 02:56:04,600 | INFO     | mean x (centered): 0.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,600 | INFO     | mean y: 2313895.8626373624
[2026-05-04 04:56:45] 2026-05-04 02:56:04,600 | INFO     | intersect: 2313895.8626373624
[2026-05-04 04:56:45] 2026-05-04 02:56:04,600 | INFO     | chi2: 1.1148747861613064
[2026-05-04 04:56:45] 2026-05-04 02:56:04,600 | INFO     | current chi2=1.1148747861613064 (change=42.160033484085076 %)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,601 | INFO     | sum of square deviations: 1719429448.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,602 | INFO     | sum of deviations: 17514951106.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,602 | INFO     | mean x (centered): 0.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,602 | INFO     | mean y: 2313272.4576271186
[2026-05-04 04:56:45] 2026-05-04 02:56:04,602 | INFO     | intersect: 2313272.4576271186
[2026-05-04 04:56:45] 2026-05-04 02:56:04,603 | INFO     | chi2: 1.115558178615975
[2026-05-04 04:56:45] 2026-05-04 02:56:04,603 | INFO     | current chi2=1.115558178615975 (change=-0.06129768680315753 %)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,603 | INFO     | right removable region: 176
[2026-05-04 04:56:45] 2026-05-04 02:56:04,603 | INFO     | sum of square deviations: 1869302025.5
[2026-05-04 04:56:45] 2026-05-04 02:56:04,605 | INFO     | sum of deviations: -12495973098.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,605 | INFO     | mean x (centered): 0.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,605 | INFO     | mean y: 2321475.7802197803
[2026-05-04 04:56:45] 2026-05-04 02:56:04,605 | INFO     | intersect: 2321475.7802197803
[2026-05-04 04:56:45] 2026-05-04 02:56:04,605 | INFO     | chi2: 0.8336197295849865
[2026-05-04 04:56:45] 2026-05-04 02:56:04,605 | INFO     | current chi2=0.8336197295849865 (change=56.75161206917328 %)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,606 | INFO     | sum of square deviations: 1719429448.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,607 | INFO     | sum of deviations: -12285266776.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,607 | INFO     | mean x (centered): 0.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,607 | INFO     | mean y: 2321259.242937853
[2026-05-04 04:56:45] 2026-05-04 02:56:04,607 | INFO     | intersect: 2321259.242937853
[2026-05-04 04:56:45] 2026-05-04 02:56:04,607 | INFO     | chi2: 0.8339386008438036
[2026-05-04 04:56:45] 2026-05-04 02:56:04,608 | INFO     | current chi2=0.8339386008438036 (change=-0.038251404987232035 %)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,608 | INFO     | left removable region: 10
[2026-05-04 04:56:45] 2026-05-04 02:56:04,608 | INFO     | sum of square deviations: 1418361477.5
[2026-05-04 04:56:45] 2026-05-04 02:56:04,609 | INFO     | sum of deviations: -1126376224.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,609 | INFO     | mean x (centered): 0.0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,609 | INFO     | mean y: 2332993.2168674697
[2026-05-04 04:56:45] 2026-05-04 02:56:04,609 | INFO     | intersect: 2332993.2168674697
[2026-05-04 04:56:45] 2026-05-04 02:56:04,610 | INFO     | chi2: 0.002257281955904638
[2026-05-04 04:56:45] 2026-05-04 02:56:04,610 | INFO     | current memory leak: -0.79 B/s (using 166 data points, chi2=0.00)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | could have reported an average CPU frequency of 2548 MHz (10 samples)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | ..............................
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . Timing measurements:
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . get job = 0 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . initial setup = 1 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . payload setup = 7 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . stage-in = 0 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . payload execution = 11358 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,611 | INFO     | . stage-out = 0 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,612 | INFO     | . log creation = 0 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,612 | INFO     | ..............................
[2026-05-04 04:56:45] 2026-05-04 02:56:04,712 | INFO     | 
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | job summary report
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | --------------------------------------------------
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | PanDA job id: 7123338971
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | task id: 49263200
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | errors: (none)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | pilot state: finished 
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | transexitcode: 0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | exeerrorcode: 0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | exeerrordiag: 
[2026-05-04 04:56:45] 2026-05-04 02:56:04,713 | INFO     | exitcode: 0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | exitmsg: OK
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | cpuconsumptiontime: 43868 s
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | nevents: 400
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | neventsw: 0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | pid: 2826528
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | pgrp: 2826528
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | corecount: 4
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | event service: False
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | sizes: {0: 2275369, 1: 2277198, 11: 2277198, 11369: 2306594, 11370: 2306593, 11371: 2315853, 11373: 2315991}
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | --------------------------------------------------
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | 
[2026-05-04 04:56:45] 2026-05-04 02:56:04,714 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-04 04:56:45] 2026-05-04 02:56:04,735 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,735 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,735 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,735 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,736 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,737 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 04:56:45] 2026-05-04 02:56:04,737 | INFO     | job 7123338971 has completed (purged errors)
[2026-05-04 04:56:45] 2026-05-04 02:56:04,737 | INFO     | overall cleanup function is called
[2026-05-04 04:56:45] 2026-05-04 02:56:05,407 | WARNING  | process 2826528 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 04:56:45] 2026-05-04 02:56:05,681 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 04:56:45] 2026-05-04 02:56:05,744 | INFO     | --- collectZombieJob: --- 10, [2826528]
[2026-05-04 04:56:45] 2026-05-04 02:56:05,744 | INFO     | zombie collector waiting for pid 2826528
[2026-05-04 04:56:45] 2026-05-04 02:56:05,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 04:56:45] 2026-05-04 02:56:05,744 | INFO     | collected zombie processes
[2026-05-04 04:56:45] 2026-05-04 02:56:05,744 | INFO     | will attempt to kill all subprocesses of pid=2826528
[2026-05-04 04:56:45] 2026-05-04 02:56:06,385 | INFO     | number of running child processes to parent process 2826528: 1
[2026-05-04 04:56:45] 2026-05-04 02:56:06,385 | INFO     | maximum number of monitored processes: 6
[2026-05-04 04:56:45] 2026-05-04 02:56:06,386 | INFO     | aborting job monitoring since job object (job id=7123338971) has expired
[2026-05-04 04:56:45] 2026-05-04 02:56:06,430 | INFO     | process IDs to be killed: [2826528] (in reverse order)
[2026-05-04 04:56:45] 2026-05-04 02:56:06,550 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 04:56:45] 2026-05-04 02:56:06,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 04:56:45] 2026-05-04 02:56:06,562 | INFO     | did not find any defunct processes belonging to 2826528
[2026-05-04 04:56:45] 2026-05-04 02:56:06,573 | INFO     | did not find any defunct processes belonging to 2826528
[2026-05-04 04:56:45] 2026-05-04 02:56:06,573 | INFO     | Ready for new job
[2026-05-04 04:56:45] 2026-05-04 02:56:06,575 | INFO     | ***************************************
[2026-05-04 04:56:45] 2026-05-04 02:56:06,575 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 04:56:45] 2026-05-04 02:56:06,575 | INFO     | ***************************************
[2026-05-04 04:56:45] 2026-05-04 02:56:06,576 | INFO     | 
[2026-05-04 04:56:45] 2026-05-04 02:56:06,579 | INFO     | architecture information:
[2026-05-04 04:56:45] 2026-05-04 02:56:06,580 | INFO     | executing command: cat /etc/os-release
[2026-05-04 04:56:45] 2026-05-04 02:56:06,594 | INFO     | cat /etc/os-release:
[2026-05-04 04:56:45] NAME="CentOS Linux"
[2026-05-04 04:56:45] VERSION="7 (Core)"
[2026-05-04 04:56:45] ID="centos"
[2026-05-04 04:56:45] ID_LIKE="rhel fedora"
[2026-05-04 04:56:45] VERSION_ID="7"
[2026-05-04 04:56:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 04:56:45] ANSI_COLOR="0;31"
[2026-05-04 04:56:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 04:56:45] HOME_URL="https://www.centos.org/"
[2026-05-04 04:56:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 04:56:45] 
[2026-05-04 04:56:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 04:56:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 04:56:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 04:56:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 04:56:45] 
[2026-05-04 04:56:45] 2026-05-04 02:56:06,594 | INFO     | ***************************************
[2026-05-04 04:56:45] 2026-05-04 02:56:07,096 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-04 04:56:45] 2026-05-04 02:56:07,114 | INFO     | sufficient remaining disk space (48402268160 B)
[2026-05-04 04:56:45] 2026-05-04 02:56:07,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 04:56:45] 2026-05-04 02:56:07,115 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 04:56:45] 2026-05-04 02:56:07,115 | INFO     | update_server=False
[2026-05-04 04:56:45] 2026-05-04 02:56:07,115 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 04:56:45] 2026-05-04 02:56:07,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 04:56:45] 2026-05-04 02:56:07,116 | INFO     | will abort loop
[2026-05-04 04:56:45] 2026-05-04 02:56:07,511 | INFO     | all payload control threads have been joined
[2026-05-04 04:56:45] 2026-05-04 02:56:07,626 | INFO     | all job control threads have been joined
[2026-05-04 04:56:45] 2026-05-04 02:56:07,711 | INFO     | all data control threads have been joined
[2026-05-04 04:56:45] 2026-05-04 02:56:08,119 | INFO     | [job] job monitor thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,120 | INFO     | [job] retrieve thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,249 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,293 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,412 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,516 | INFO     | [payload] control thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 04:56:45] 2026-05-04 02:56:08,610 | INFO     | [data] copytool_in thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,631 | INFO     | [job] control thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:08,716 | INFO     | [data] control thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:09,246 | INFO     | [payload] validate_post thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:09,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 04:56:45] 2026-05-04 02:56:09,561 | INFO     | [payload] failed_post thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:09,589 | INFO     | [job] validate thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:09,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 04:56:45] 2026-05-04 02:56:10,609 | INFO     | [data] copytool_out thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:10,728 | INFO     | [job] queue monitor thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:13,565 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:17,325 | INFO     | job.realtimelogging is not enabled
[2026-05-04 04:56:45] 2026-05-04 02:56:18,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 04:56:45] 2026-05-04 02:56:36,620 | INFO     | PID=2812626 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 04:56:45] 2026-05-04 02:56:36,621 | INFO     | .. there are 12 such processes running
[2026-05-04 04:56:45] 2026-05-04 02:56:36,621 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 04:56:45] 2026-05-04 02:56:36,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 04:56:45] 2026-05-04 02:56:36,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 04:56:45] 2026-05-04 02:56:39,484 | INFO     | [monitor] cgroup control has ended
[2026-05-04 04:56:45] 2026-05-04 02:56:40,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22782187530048)>', '<ExcThread(monitor, started 22781948602112)>']
[2026-05-04 04:56:45] 2026-05-04 02:56:40,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 04:56:45] 2026-05-04 02:56:40,641 | INFO     | [monitor] control thread has ended
[2026-05-04 04:56:45] 2026-05-04 02:56:45,629 | INFO     | all workflow threads have been joined
[2026-05-04 04:56:45] 2026-05-04 02:56:45,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 04:56:45] 2026-05-04 02:56:45,629 | INFO     | traces error code: 0
[2026-05-04 04:56:45] 2026-05-04 02:56:45,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 04:56:45] 2026-05-04 02:56:45,784 [wrapper] ==== pilot stdout END ====
[2026-05-04 04:56:45] 2026-05-04 02:56:45,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 04:56:45] 2026-05-04 02:56:45,788 [wrapper] pilotpid: 2812626
[2026-05-04 04:56:45] 2026-05-04 02:56:45,791 [wrapper] Pilot exit status: 0
[2026-05-04 04:56:45] 2026-05-04 02:56:45,801 [wrapper] pandaids: 7123338971 7123338971
[2026-05-04 04:56:45] 2026-05-04 02:56:45,875 [wrapper] cleanup supervisor_pilot 3038616 2812627
[2026-05-04 04:56:45] 2026-05-04 02:56:45,878 [wrapper] Test setup, not cleaning
[2026-05-04 04:56:45] 2026-05-04 02:56:45,881 [wrapper] apfmon messages muted
[2026-05-04 04:56:45] 2026-05-04 02:56:45,884 [wrapper] ==== wrapper stdout END ====
[2026-05-04 04:56:45] 2026-05-04 02:56:45,886 [wrapper] ==== wrapper stderr END ====
[2026-05-04 04:56:45]  *** Error codes and diagnostics ***
[2026-05-04 04:56:45]     "exeErrorCode": 0,
[2026-05-04 04:56:45]     "pilotErrorCode": 0,
[2026-05-04 04:56:45]  *** Listing of results directory ***
[2026-05-04 04:56:45] total 632212
[2026-05-04 04:56:45] drwx------. 5 boinc boinc      4096 Apr 22 11:13 pilot3
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc    683926 May  2 04:15 pilot3.tar.gz
[2026-05-04 04:56:45] -rwx------. 1 boinc boinc     36322 May  2 04:15 runpilot2-wrapper.sh
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc      5631 May  2 04:15 queuedata.json
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc       100 May  3 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 04:56:45] -rwxr-xr-x. 1 boinc boinc      7986 May  3 22:38 run_atlas
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc       105 May  3 22:38 job.xml
[2026-05-04 04:56:45] -rw-r--r--. 3 boinc boinc 223489147 May  3 22:38 EVNT.49263198._001888.pool.root.1
[2026-05-04 04:56:45] -rw-r--r--. 3 boinc boinc 223489147 May  3 22:38 ATLAS.root_0
[2026-05-04 04:56:45] -rw-r--r--. 2 boinc boinc     15667 May  3 22:38 start_atlas.sh
[2026-05-04 04:56:45] drwxrwx--x. 2 boinc boinc      4096 May  3 22:38 shared
[2026-05-04 04:56:45] -rw-r--r--. 2 boinc boinc    697422 May  3 22:38 input.tar.gz
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc         0 May  3 22:38 boinc_lockfile
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc      2577 May  4 01:46 pandaJob.out
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc   1003017 May  4 01:46 agis_schedconf.cvmfs.json
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc       451 May  4 01:46 workernode_map.json
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc      6490 May  4 01:46 init_data.xml
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc 193474334 May  4 04:55 HITS.49263200._087704.pool.root.1
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc        96 May  4 04:55 pilot_heartbeat.json
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc       489 May  4 04:55 boinc_task_state.xml
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc      1032 May  4 04:55 memory_monitor_summary.json
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc   1508687 May  4 04:56 agis_ddmendpoints.agis.ALL.json
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc    319267 May  4 04:56 log.49263200._087704.job.log.tgz.1
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc      6423 May  4 04:56 heartbeat_new.json
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc      6314 May  4 04:56 heartbeat.json
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc      8192 May  4 04:56 boinc_mmap_file
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc        28 May  4 04:56 wrapper_checkpoint.txt
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc      4906 May  4 04:56 pilotlog.txt
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc   1081028 May  4 04:56 log.49263200._087704.job.log.1
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc       357 May  4 04:56 output.list
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc       410 May  4 04:56 runtime_log
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc   1413120 May  4 04:56 result.tar.gz
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc      8905 May  4 04:56 runtime_log.err
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc       790 May  4 04:56 5e56d85e8ab7.diag
[2026-05-04 04:56:45] -rw-r--r--. 1 boinc boinc     22741 May  4 04:56 stderr.txt
[2026-05-04 04:56:45] HITS file was successfully produced:
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc 193474334 May  4 04:55 shared/HITS.pool.root.1
[2026-05-04 04:56:45]  *** Contents of shared directory: ***
[2026-05-04 04:56:45] total 409280
[2026-05-04 04:56:45] -rw-r--r--. 3 boinc boinc 223489147 May  3 22:38 ATLAS.root_0
[2026-05-04 04:56:45] -rw-r--r--. 2 boinc boinc     15667 May  3 22:38 start_atlas.sh
[2026-05-04 04:56:45] -rw-r--r--. 2 boinc boinc    697422 May  3 22:38 input.tar.gz
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc 193474334 May  4 04:55 HITS.pool.root.1
[2026-05-04 04:56:45] -rw-------. 1 boinc boinc   1413120 May  4 04:56 result.tar.gz
04:56:47 (2804400): run_atlas exited; CPU time 44277.112404
04:56:47 (2804400): called boinc_finish(0)

</stderr_txt>
]]>

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