Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:20:35 (25553): wrapper (7.7.26015): starting
00:20:35 (25553): wrapper: running run_atlas (--nthreads 12)
[2026-05-02 00:20:35] Arguments: --nthreads 12
[2026-05-02 00:20:35] Threads: 12
[2026-05-02 00:20:35] Checking for CVMFS
[2026-05-02 00:20:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 00:20:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 00:20:35] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 00:20:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 00:20:35] 2.11.2.0 14820 368618 87628 159119 3 49 17600398 20275201 1 130560 0 154261364 99.942 17541386 30524 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 00:20:35] CVMFS is ok
[2026-05-02 00:20:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 00:20:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 00:20:35] Further information can be found at the LHC@home message board.
[2026-05-02 00:20:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 00:20:35] Checking for apptainer binary...
[2026-05-02 00:20:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 00:20:35] Running /usr/bin/apptainer --version
[2026-05-02 00:20:36] apptainer version 1.3.2-1.el7
[2026-05-02 00:20:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 00:20:37] c-205-27.aglt2.org
[2026-05-02 00:20:37] apptainer works
[2026-05-02 00:20:37] Set ATHENA_PROC_NUMBER=12
[2026-05-02 00:20:37] Set ATHENA_CORE_NUMBER=12
[2026-05-02 00:20:37] Starting ATLAS job with PandaID=7123338216
[2026-05-02 00:20:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 01:53:14]  *** The last 200 lines of the pilot log: ***
[2026-05-02 01:53:14]  ddm_activity=['write_lan', 'write_wan']
[2026-05-02 01:53:14]  ddmendpoint=NDGF-T1_DATADISK
[2026-05-02 01:53:14]  ddmendpoint_alt=None
[2026-05-02 01:53:14]  direct_access_lan=False
[2026-05-02 01:53:14]  direct_access_wan=False
[2026-05-02 01:53:14]  domain=
[2026-05-02 01:53:14]  filesize=370588
[2026-05-02 01:53:14]  filetype=log
[2026-05-02 01:53:14]  guid=2187fad8-336d-4b5e-b59e-4942c87b2abf
[2026-05-02 01:53:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-02 01:53:14]  is_altstaged=None
[2026-05-02 01:53:14]  is_tar=False
[2026-05-02 01:53:14]  lfn=log.49645815._029062.job.log.tgz.1
[2026-05-02 01:53:14]  mtime=0
[2026-05-02 01:53:14]  protocol_id=None
[2026-05-02 01:53:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-02 01:53:14]  replicas=None
[2026-05-02 01:53:14]  scope=mc23_13p6TeV
[2026-05-02 01:53:14]  status=None
[2026-05-02 01:53:14]  status_code=0
[2026-05-02 01:53:14]  storage_token=
[2026-05-02 01:53:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7123338216/log.49645815._029062.job.log.tgz.1
[2026-05-02 01:53:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/28/log.49645815._029062.job.log.tgz.1
[2026-05-02 01:53:14]  workdir=None
[2026-05-02 01:53:14] ]
[2026-05-02 01:53:14] 2026-05-02 05:52:21,727 | INFO     | transferring file log.49645815._029062.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7123338216/log.49645815._029062.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-05-02 01:53:14] 2026-05-02 05:52:21,728 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7123338216/log.49645815._029062.job.log.tgz.1 /tmp/boinchome/slots/0/log.49645815._029062.job
[2026-05-02 01:53:14] 2026-05-02 05:52:21,748 | INFO     | adding to output.list: log.49645815._029062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/28/log.49645815._029062.job.log.tg
[2026-05-02 01:53:14] 2026-05-02 05:52:21,749 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-02 01:53:14] 2026-05-02 05:52:21,749 | INFO     | summary of transferred files:
[2026-05-02 01:53:14] 2026-05-02 05:52:21,750 | INFO     |  -- lfn=log.49645815._029062.job.log.tgz.1, status_code=0, status=transferred
[2026-05-02 01:53:14] 2026-05-02 05:52:21,750 | INFO     | stage-out finished correctly
[2026-05-02 01:53:14] 2026-05-02 05:52:21,831 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 01:53:14] 2026-05-02 05:52:21,911 | INFO     | job 7123338216 has state=finished
[2026-05-02 01:53:14] 2026-05-02 05:52:21,911 | INFO     | preparing for final server update for job 7123338216 in state='finished'
[2026-05-02 01:53:14] 2026-05-02 05:52:21,912 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7123338216/jobReport.json
[2026-05-02 01:53:14] 2026-05-02 05:52:21,915 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-02 01:53:14] 2026-05-02 05:52:21,915 | INFO     | this job has now completed (state=finished)
[2026-05-02 01:53:14] 2026-05-02 05:52:21,915 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 01:53:14] 2026-05-02 05:52:21,915 | INFO     | log transfer has been attempted: DONE
[2026-05-02 01:53:14] 2026-05-02 05:52:21,916 | INFO     | job 7123338216 has finished - writing final server update
[2026-05-02 01:53:14] 2026-05-02 05:52:21,916 | INFO     | total number of processed events: 400 (read)
[2026-05-02 01:53:14] 2026-05-02 05:52:21,918 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7123338216/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 01:53:14] 2026-05-02 05:52:21,919 | INFO     | extracted standard info from prmon json
[2026-05-02 01:53:14] 2026-05-02 05:52:21,919 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 01:53:14] 2026-05-02 05:52:21,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 01:53:14] 2026-05-02 05:52:21,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 01:53:14] 2026-05-02 05:52:21,921 | INFO     | fitting pss+swap vs Time
[2026-05-02 01:53:14] 2026-05-02 05:52:21,921 | INFO     | sum of square deviations: 177275882.0
[2026-05-02 01:53:14] 2026-05-02 05:52:21,921 | INFO     | sum of deviations: -11140215524.0
[2026-05-02 01:53:14] 2026-05-02 05:52:21,921 | INFO     | mean x (centered): 0.0
[2026-05-02 01:53:14] 2026-05-02 05:52:21,921 | INFO     | mean y: 2845669.481927711
[2026-05-02 01:53:14] 2026-05-02 05:52:21,922 | INFO     | intersect: 2845669.481927711
[2026-05-02 01:53:14] 2026-05-02 05:52:21,922 | INFO     | chi2: 0.10617142236163386
[2026-05-02 01:53:14] 2026-05-02 05:52:21,922 | INFO     | current memory leak: -62.84 B/s (using 83 data points, chi2=0.11)
[2026-05-02 01:53:14] 2026-05-02 05:52:21,922 | INFO     | could have reported an average CPU frequency of 1662 MHz (7 samples)
[2026-05-02 01:53:14] 2026-05-02 05:52:21,922 | INFO     | ..............................
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . Timing measurements:
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . get job = 0 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . initial setup = 7 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . payload setup = 14 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . stage-in = 0 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . payload execution = 5451 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . stage-out = 0 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | . log creation = 0 s
[2026-05-02 01:53:14] 2026-05-02 05:52:21,923 | INFO     | ..............................
[2026-05-02 01:53:14] 2026-05-02 05:52:22,049 | INFO     | 
[2026-05-02 01:53:14] 2026-05-02 05:52:22,049 | INFO     | job summary report
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | --------------------------------------------------
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | PanDA job id: 7123338216
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | task id: 49645815
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | errors: (none)
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | pilot state: finished 
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | transexitcode: 0
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | exeerrorcode: 0
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | exeerrordiag: 
[2026-05-02 01:53:14] 2026-05-02 05:52:22,050 | INFO     | exitcode: 0
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | exitmsg: OK
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | cpuconsumptiontime: 59651 s
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | nevents: 400
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | neventsw: 0
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | pid: 1223
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | pgrp: 1223
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | corecount: 12
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | event service: False
[2026-05-02 01:53:14] 2026-05-02 05:52:22,051 | INFO     | sizes: {0: 2275349, 1: 2277234, 12: 2277234, 5468: 2303901, 5469: 2303900, 5471: 2313276}
[2026-05-02 01:53:14] 2026-05-02 05:52:22,052 | INFO     | --------------------------------------------------
[2026-05-02 01:53:14] 2026-05-02 05:52:22,052 | INFO     | 
[2026-05-02 01:53:14] 2026-05-02 05:52:22,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-02 01:53:14] 2026-05-02 05:52:22,076 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,076 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,076 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,077 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 01:53:14] 2026-05-02 05:52:22,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,079 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 01:53:14] 2026-05-02 05:52:22,079 | INFO     | job 7123338216 has completed (purged errors)
[2026-05-02 01:53:14] 2026-05-02 05:52:22,080 | INFO     | overall cleanup function is called
[2026-05-02 01:53:14] 2026-05-02 05:52:23,088 | INFO     | --- collectZombieJob: --- 10, [1223]
[2026-05-02 01:53:14] 2026-05-02 05:52:23,088 | INFO     | zombie collector waiting for pid 1223
[2026-05-02 01:53:14] 2026-05-02 05:52:23,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 01:53:14] 2026-05-02 05:52:23,088 | INFO     | collected zombie processes
[2026-05-02 01:53:14] 2026-05-02 05:52:23,088 | INFO     | will attempt to kill all subprocesses of pid=1223
[2026-05-02 01:53:14] 2026-05-02 05:52:23,165 | INFO     | process IDs to be killed: [1223] (in reverse order)
[2026-05-02 01:53:14] 2026-05-02 05:52:23,219 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 01:53:14] 2026-05-02 05:52:23,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 01:53:14] 2026-05-02 05:52:23,222 | INFO     | did not find any defunct processes belonging to 1223
[2026-05-02 01:53:14] 2026-05-02 05:52:23,225 | INFO     | did not find any defunct processes belonging to 1223
[2026-05-02 01:53:14] 2026-05-02 05:52:23,226 | INFO     | Ready for new job
[2026-05-02 01:53:14] 2026-05-02 05:52:23,227 | INFO     | ***************************************
[2026-05-02 01:53:14] 2026-05-02 05:52:23,227 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 01:53:14] 2026-05-02 05:52:23,227 | INFO     | ***************************************
[2026-05-02 01:53:14] 2026-05-02 05:52:23,228 | INFO     | 
[2026-05-02 01:53:14] 2026-05-02 05:52:23,228 | INFO     | architecture information:
[2026-05-02 01:53:14] 2026-05-02 05:52:23,229 | INFO     | executing command: cat /etc/os-release
[2026-05-02 01:53:14] 2026-05-02 05:52:23,243 | INFO     | cat /etc/os-release:
[2026-05-02 01:53:14] NAME="CentOS Linux"
[2026-05-02 01:53:14] VERSION="7 (Core)"
[2026-05-02 01:53:14] ID="centos"
[2026-05-02 01:53:14] ID_LIKE="rhel fedora"
[2026-05-02 01:53:14] VERSION_ID="7"
[2026-05-02 01:53:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 01:53:14] ANSI_COLOR="0;31"
[2026-05-02 01:53:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 01:53:14] HOME_URL="https://www.centos.org/"
[2026-05-02 01:53:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 01:53:14] 
[2026-05-02 01:53:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 01:53:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 01:53:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 01:53:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 01:53:14] 
[2026-05-02 01:53:14] 2026-05-02 05:52:23,243 | INFO     | ***************************************
[2026-05-02 01:53:14] 2026-05-02 05:52:23,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-02 01:53:14] 2026-05-02 05:52:23,762 | INFO     | sufficient remaining disk space (29308747776 B)
[2026-05-02 01:53:14] 2026-05-02 05:52:23,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 01:53:14] 2026-05-02 05:52:23,763 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 01:53:14] 2026-05-02 05:52:23,763 | INFO     | update_server=False
[2026-05-02 01:53:14] 2026-05-02 05:52:23,763 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 01:53:14] 2026-05-02 05:52:23,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 01:53:14] 2026-05-02 05:52:23,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 01:53:14] 2026-05-02 05:52:23,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 01:53:14] 2026-05-02 05:52:23,764 | INFO     | aborting loop
[2026-05-02 01:53:14] 2026-05-02 05:52:23,787 | INFO     | all job control threads have been joined
[2026-05-02 01:53:14] 2026-05-02 05:52:24,503 | INFO     | all data control threads have been joined
[2026-05-02 01:53:14] 2026-05-02 05:52:24,548 | INFO     | all payload control threads have been joined
[2026-05-02 01:53:14] 2026-05-02 05:52:24,769 | INFO     | [job] retrieve thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:24,770 | INFO     | [job] queue monitor thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:24,770 | INFO     | [job] job monitor thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:24,773 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:24,794 | INFO     | [job] control thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:24,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 01:53:14] 2026-05-02 05:52:24,919 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:25,341 | INFO     | [payload] validate_post thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:25,509 | INFO     | [data] control thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:25,554 | INFO     | [payload] control thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:25,812 | INFO     | [job] validate thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:26,262 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:26,268 | INFO     | [data] copytool_in thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:26,361 | INFO     | [payload] failed_post thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:26,843 | INFO     | [data] copytool_out thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:27,769 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:34,596 | INFO     | job.realtimelogging is not enabled
[2026-05-02 01:53:14] 2026-05-02 05:52:35,602 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 01:53:14] 2026-05-02 05:52:53,883 | INFO     | PID=29239 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 01:53:14] 2026-05-02 05:52:53,884 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 01:53:14] 2026-05-02 05:52:53,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 01:53:14] 2026-05-02 05:52:53,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 01:53:14] 2026-05-02 05:53:07,601 | INFO     | [monitor] cgroup control has ended
[2026-05-02 01:53:14] 2026-05-02 05:53:09,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128840038208)>', '<ExcThread(monitor, started 140128165013248)>']
[2026-05-02 01:53:14] 2026-05-02 05:53:09,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 01:53:14] 2026-05-02 05:53:09,966 | INFO     | [monitor] control thread has ended
[2026-05-02 01:53:14] 2026-05-02 05:53:14,248 | INFO     | all workflow threads have been joined
[2026-05-02 01:53:14] 2026-05-02 05:53:14,248 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 01:53:14] 2026-05-02 05:53:14,248 | INFO     | traces error code: 0
[2026-05-02 01:53:14] 2026-05-02 05:53:14,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 01:53:14] 2026-05-02 05:53:14,360 [wrapper] ==== pilot stdout END ====
[2026-05-02 01:53:14] 2026-05-02 05:53:14,364 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 01:53:14] 2026-05-02 05:53:14,368 [wrapper] pilotpid: 29239
[2026-05-02 01:53:14] 2026-05-02 05:53:14,371 [wrapper] Pilot exit status: 0
[2026-05-02 01:53:14] 2026-05-02 05:53:14,387 [wrapper] pandaids: 7123338216
[2026-05-02 01:53:14] 2026-05-02 05:53:14,432 [wrapper] cleanup supervisor_pilot 27048 29240
[2026-05-02 01:53:14] 2026-05-02 05:53:14,436 [wrapper] Test setup, not cleaning
[2026-05-02 01:53:14] 2026-05-02 05:53:14,441 [wrapper] apfmon messages muted
[2026-05-02 01:53:14] 2026-05-02 05:53:14,444 [wrapper] ==== wrapper stdout END ====
[2026-05-02 01:53:14] 2026-05-02 05:53:14,448 [wrapper] ==== wrapper stderr END ====
[2026-05-02 01:53:14]  *** Error codes and diagnostics ***
[2026-05-02 01:53:14]     "exeErrorCode": 0,
[2026-05-02 01:53:14]     "pilotErrorCode": 0,
[2026-05-02 01:53:14]  *** Listing of results directory ***
[2026-05-02 01:53:14] total 415568
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas    683926 May  1 20:25 pilot3.tar.gz
[2026-05-02 01:53:14] -rwx------ 1 boincer umatlas     36322 May  1 20:29 runpilot2-wrapper.sh
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas      5631 May  1 20:29 queuedata.json
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas       100 May  2 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 01:53:14] -rwxr-xr-x 1 boincer umatlas      7986 May  2 00:20 run_atlas
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas       105 May  2 00:20 job.xml
[2026-05-02 01:53:14] -rw-r--r-- 2 boincer umatlas 225817932 May  2 00:20 EVNT.48629115._000673.pool.root.1
[2026-05-02 01:53:14] -rw-r--r-- 2 boincer umatlas     15667 May  2 00:20 start_atlas.sh
[2026-05-02 01:53:14] drwxrwx--x 2 boincer umatlas      4096 May  2 00:20 shared
[2026-05-02 01:53:14] -rw-r--r-- 2 boincer umatlas    697442 May  2 00:20 input.tar.gz
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas         0 May  2 00:20 boinc_lockfile
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas      2629 May  2 00:20 pandaJob.out
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas        57 May  2 00:20 setup.sh.local
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas   1002976 May  2 00:20 agis_schedconf.cvmfs.json
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas   1508687 May  2 00:20 agis_ddmendpoints.agis.ALL.json
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas       433 May  2 00:20 workernode_map.json
[2026-05-02 01:53:14] drwx------ 5 boincer umatlas      4096 May  2 00:20 pilot3
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas      5869 May  2 01:45 init_data.xml
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas 193791186 May  2 01:51 HITS.49645815._029062.pool.root.1
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas       487 May  2 01:51 boinc_task_state.xml
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas        95 May  2 01:52 pilot_heartbeat.json
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas      1046 May  2 01:52 memory_monitor_summary.json
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas    370588 May  2 01:52 log.49645815._029062.job.log.tgz.1
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas      6434 May  2 01:52 heartbeat_new.json
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas      6325 May  2 01:52 heartbeat.json
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas      8192 May  2 01:53 boinc_mmap_file
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas        27 May  2 01:53 wrapper_checkpoint.txt
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas      4817 May  2 01:53 pilotlog.txt
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas    524417 May  2 01:53 log.49645815._029062.job.log.1
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas       357 May  2 01:53 output.list
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas       410 May  2 01:53 runtime_log
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas    911360 May  2 01:53 result.tar.gz
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas      8966 May  2 01:53 runtime_log.err
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas       659 May  2 01:53 456a101c3c59.diag
[2026-05-02 01:53:14] -rw-r--r-- 1 boincer umatlas     20650 May  2 01:53 stderr.txt
[2026-05-02 01:53:14] HITS file was successfully produced:
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas 193791186 May  2 01:51 shared/HITS.pool.root.1
[2026-05-02 01:53:14]  *** Contents of shared directory: ***
[2026-05-02 01:53:14] total 411376
[2026-05-02 01:53:14] -rw-r--r-- 2 boincer umatlas 225817932 May  2 00:20 ATLAS.root_0
[2026-05-02 01:53:14] -rw-r--r-- 2 boincer umatlas     15667 May  2 00:20 start_atlas.sh
[2026-05-02 01:53:14] -rw-r--r-- 2 boincer umatlas    697442 May  2 00:20 input.tar.gz
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas 193791186 May  2 01:51 HITS.pool.root.1
[2026-05-02 01:53:14] -rw------- 1 boincer umatlas    911360 May  2 01:53 result.tar.gz
01:53:15 (25553): run_atlas exited; CPU time 59631.028797
01:53:15 (25553): called boinc_finish(0)

</stderr_txt>
]]>

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