Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:13 (2312428): wrapper (7.7.26015): starting
00:03:13 (2312428): wrapper: running run_atlas (--nthreads 11)
[2026-05-02 00:03:13] Arguments: --nthreads 11
[2026-05-02 00:03:13] Threads: 11
[2026-05-02 00:03:13] Checking for CVMFS
[2026-05-02 00:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 00:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 00:03:14] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 00:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 00:03:16] 2.13.3.0 11845 2289 143112 159118 1 700 26304314 32935937 22194 16776704 0 7557813 99.245 14408900 37228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-02 00:03:16] CVMFS is ok
[2026-05-02 00:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 00:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 00:03:16] Further information can be found at the LHC@home message board.
[2026-05-02 00:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 00:03:16] Checking for apptainer binary...
[2026-05-02 00:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 00:03:16] Running /usr/bin/apptainer --version
[2026-05-02 00:03:16] apptainer version 1.4.5-3.el9
[2026-05-02 00:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 00:03:16] c6-5-37-2.aglt2.org
[2026-05-02 00:03:16] apptainer works
[2026-05-02 00:03:16] Set ATHENA_PROC_NUMBER=11
[2026-05-02 00:03:16] Set ATHENA_CORE_NUMBER=11
[2026-05-02 00:03:16] Starting ATLAS job with PandaID=7123316406
[2026-05-02 00:03:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 06:05:42]  *** The last 200 lines of the pilot log: ***
[2026-05-02 06:05:42] 2026-05-02 10:04:45,580 | WARNING  | process 2331866 can no longer be monitored (due to stat problems) - aborting
[2026-05-02 06:05:42] 2026-05-02 10:04:45,580 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7123316406/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 06:05:42] 2026-05-02 10:04:45,829 | INFO     | number of running child processes to parent process 2331866: 1
[2026-05-02 06:05:42] 2026-05-02 10:04:45,829 | INFO     | maximum number of monitored processes: 6
[2026-05-02 06:05:42] 2026-05-02 10:04:47,373 | INFO     | job 7123316406 has state=finished
[2026-05-02 06:05:42] 2026-05-02 10:04:47,373 | INFO     | preparing for final server update for job 7123316406 in state='finished'
[2026-05-02 06:05:42] 2026-05-02 10:04:47,373 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7123316406/jobReport.json
[2026-05-02 06:05:42] 2026-05-02 10:04:47,377 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-05-02 06:05:42] 2026-05-02 10:04:47,377 | INFO     | this job has now completed (state=finished)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,377 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,377 | INFO     | log transfer has been attempted: DONE
[2026-05-02 06:05:42] 2026-05-02 10:04:47,377 | INFO     | job 7123316406 has finished - writing final server update
[2026-05-02 06:05:42] 2026-05-02 10:04:47,378 | INFO     | total number of processed events: 400 (read)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,385 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7123316406/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,386 | INFO     | extracted standard info from prmon json
[2026-05-02 06:05:42] 2026-05-02 10:04:47,386 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 06:05:42] 2026-05-02 10:04:47,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 06:05:42] 2026-05-02 10:04:47,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 06:05:42] 2026-05-02 10:04:47,390 | INFO     | fitting pss+swap vs Time
[2026-05-02 06:05:42] 2026-05-02 10:04:47,390 | INFO     | sum of square deviations: 13755058795.45764
[2026-05-02 06:05:42] 2026-05-02 10:04:47,392 | INFO     | sum of deviations: 191410803285.5592
[2026-05-02 06:05:42] 2026-05-02 10:04:47,393 | INFO     | mean x (centered): 0.0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,393 | INFO     | mean y: 2570220.7853107345
[2026-05-02 06:05:42] 2026-05-02 10:04:47,393 | INFO     | intersect: 2570220.7853107345
[2026-05-02 06:05:42] 2026-05-02 10:04:47,393 | INFO     | chi2: 4.296376531008574
[2026-05-02 06:05:42] 2026-05-02 10:04:47,393 | INFO     | sum of square deviations: 13180423087.083097
[2026-05-02 06:05:42] 2026-05-02 10:04:47,395 | INFO     | sum of deviations: 212789962764.8337
[2026-05-02 06:05:42] 2026-05-02 10:04:47,396 | INFO     | mean x (centered): 0.0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,396 | INFO     | mean y: 2575818.157593123
[2026-05-02 06:05:42] 2026-05-02 10:04:47,396 | INFO     | intersect: 2575818.157593123
[2026-05-02 06:05:42] 2026-05-02 10:04:47,396 | INFO     | chi2: 3.5118623775774527
[2026-05-02 06:05:42] 2026-05-02 10:04:47,396 | INFO     | current chi2=3.5118623775774527 (change=18.259902216879418 %)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,396 | INFO     | right removable region: 348
[2026-05-02 06:05:42] 2026-05-02 10:04:47,397 | INFO     | sum of square deviations: 13180333417.0831
[2026-05-02 06:05:42] 2026-05-02 10:04:47,398 | INFO     | sum of deviations: 89503702294.21202
[2026-05-02 06:05:42] 2026-05-02 10:04:47,399 | INFO     | mean x (centered): 0.0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,399 | INFO     | mean y: 2597215.9713467048
[2026-05-02 06:05:42] 2026-05-02 10:04:47,399 | INFO     | intersect: 2597215.9713467048
[2026-05-02 06:05:42] 2026-05-02 10:04:47,399 | INFO     | chi2: 1.4259769105461242
[2026-05-02 06:05:42] 2026-05-02 10:04:47,399 | INFO     | current chi2=1.4259769105461242 (change=66.80977795464831 %)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,399 | INFO     | sum of square deviations: 12621883844.8809
[2026-05-02 06:05:42] 2026-05-02 10:04:47,401 | INFO     | sum of deviations: 53225068700.19186
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | mean x (centered): 0.0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | mean y: 2607113.784883721
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | intersect: 2607113.784883721
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | chi2: 1.1160782286855166
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | current chi2=1.1160782286855166 (change=21.732377261418755 %)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | left removable region: 10
[2026-05-02 06:05:42] 2026-05-02 10:04:47,402 | INFO     | sum of square deviations: 11972899628.295881
[2026-05-02 06:05:42] 2026-05-02 10:04:47,404 | INFO     | sum of deviations: 75553518079.1065
[2026-05-02 06:05:42] 2026-05-02 10:04:47,405 | INFO     | mean x (centered): 0.0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,405 | INFO     | mean y: 2613308.75443787
[2026-05-02 06:05:42] 2026-05-02 10:04:47,405 | INFO     | intersect: 2613308.75443787
[2026-05-02 06:05:42] 2026-05-02 10:04:47,405 | INFO     | chi2: 0.31139675237127296
[2026-05-02 06:05:42] 2026-05-02 10:04:47,405 | INFO     | current memory leak: 6.31 B/s (using 338 data points, chi2=0.31)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | could have reported an average CPU frequency of 3110 MHz (15 samples)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | ..............................
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . Timing measurements:
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . get job = 0 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . initial setup = 25 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . payload setup = 39 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . stage-in = 0 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . payload execution = 21572 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . stage-out = 2 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | . log creation = 0 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,406 | INFO     | ..............................
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | 
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | job summary report
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | --------------------------------------------------
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | PanDA job id: 7123316406
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | task id: 49645815
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | errors: (none)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,478 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | pilot state: finished 
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | transexitcode: 0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | exeerrorcode: 0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | exeerrordiag: 
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | exitcode: 0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | exitmsg: OK
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | cpuconsumptiontime: 49558 s
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | nevents: 400
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | neventsw: 0
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | pid: 2331866
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | pgrp: 2331866
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | corecount: 11
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | event service: False
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | sizes: {0: 2274699, 1: 2275384, 2: 2261327, 3: 2277241, 21616: 2311588, 21620: 2320586, 21621: 2320770, 21624: 2320964}
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | --------------------------------------------------
[2026-05-02 06:05:42] 2026-05-02 10:04:47,479 | INFO     | 
[2026-05-02 06:05:42] 2026-05-02 10:04:47,480 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-05-02 06:05:42] 2026-05-02 10:04:47,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,519 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,520 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 06:05:42] 2026-05-02 10:04:47,520 | INFO     | job 7123316406 has completed (purged errors)
[2026-05-02 06:05:42] 2026-05-02 10:04:47,520 | INFO     | overall cleanup function is called
[2026-05-02 06:05:42] 2026-05-02 10:04:48,531 | INFO     | --- collectZombieJob: --- 10, [2331866]
[2026-05-02 06:05:42] 2026-05-02 10:04:48,531 | INFO     | zombie collector waiting for pid 2331866
[2026-05-02 06:05:42] 2026-05-02 10:04:48,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 06:05:42] 2026-05-02 10:04:48,531 | INFO     | collected zombie processes
[2026-05-02 06:05:42] 2026-05-02 10:04:48,531 | INFO     | will attempt to kill all subprocesses of pid=2331866
[2026-05-02 06:05:42] 2026-05-02 10:04:48,794 | INFO     | process IDs to be killed: [2331866] (in reverse order)
[2026-05-02 06:05:42] 2026-05-02 10:04:48,897 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 06:05:42] 2026-05-02 10:04:48,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 06:05:42] 2026-05-02 10:04:48,910 | INFO     | did not find any defunct processes belonging to 2331866
[2026-05-02 06:05:42] 2026-05-02 10:04:48,925 | INFO     | did not find any defunct processes belonging to 2331866
[2026-05-02 06:05:42] 2026-05-02 10:04:48,925 | INFO     | Ready for new job
[2026-05-02 06:05:42] 2026-05-02 10:04:48,928 | INFO     | ***************************************
[2026-05-02 06:05:42] 2026-05-02 10:04:48,928 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 06:05:42] 2026-05-02 10:04:48,928 | INFO     | ***************************************
[2026-05-02 06:05:42] 2026-05-02 10:04:48,928 | INFO     | 
[2026-05-02 06:05:42] 2026-05-02 10:04:48,931 | INFO     | architecture information:
[2026-05-02 06:05:42] 2026-05-02 10:04:48,932 | INFO     | executing command: cat /etc/os-release
[2026-05-02 06:05:42] 2026-05-02 10:04:48,950 | INFO     | cat /etc/os-release:
[2026-05-02 06:05:42] NAME="CentOS Linux"
[2026-05-02 06:05:42] VERSION="7 (Core)"
[2026-05-02 06:05:42] ID="centos"
[2026-05-02 06:05:42] ID_LIKE="rhel fedora"
[2026-05-02 06:05:42] VERSION_ID="7"
[2026-05-02 06:05:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 06:05:42] ANSI_COLOR="0;31"
[2026-05-02 06:05:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 06:05:42] HOME_URL="https://www.centos.org/"
[2026-05-02 06:05:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 06:05:42] 
[2026-05-02 06:05:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 06:05:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 06:05:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 06:05:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 06:05:42] 
[2026-05-02 06:05:42] 2026-05-02 10:04:48,951 | INFO     | ***************************************
[2026-05-02 06:05:42] 2026-05-02 10:04:49,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-05-02 06:05:42] 2026-05-02 10:04:49,475 | INFO     | sufficient remaining disk space (74957455360 B)
[2026-05-02 06:05:42] 2026-05-02 10:04:49,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 06:05:42] 2026-05-02 10:04:49,476 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 06:05:42] 2026-05-02 10:04:49,477 | INFO     | update_server=False
[2026-05-02 06:05:42] 2026-05-02 10:04:49,477 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 06:05:42] 2026-05-02 10:04:49,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:05:42] 2026-05-02 10:04:49,478 | INFO     | aborting loop
[2026-05-02 06:05:42] 2026-05-02 10:04:49,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 06:05:42] 2026-05-02 10:04:49,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:05:42] 2026-05-02 10:04:50,260 | INFO     | all payload control threads have been joined
[2026-05-02 06:05:42] 2026-05-02 10:04:50,335 | INFO     | all job control threads have been joined
[2026-05-02 06:05:42] 2026-05-02 10:04:50,483 | INFO     | [job] retrieve thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:50,483 | INFO     | [job] job monitor thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:50,484 | INFO     | [job] queue monitor thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:50,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 06:05:42] 2026-05-02 10:04:50,574 | INFO     | all data control threads have been joined
[2026-05-02 06:05:42] 2026-05-02 10:04:51,153 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,221 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,265 | INFO     | [payload] control thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,321 | INFO     | [payload] failed_post thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,341 | INFO     | [job] control thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,453 | INFO     | [job] validate thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,484 | INFO     | [data] copytool_out thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,542 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,579 | INFO     | [data] control thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,878 | INFO     | [data] copytool_in thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:51,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:52,055 | INFO     | [payload] validate_post thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:04:54,498 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 06:05:42] 2026-05-02 10:05:00,698 | INFO     | [monitor] cgroup control has ended
[2026-05-02 06:05:42] 2026-05-02 10:05:02,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416229586752)>', '<ExcThread(monitor, started 140415877498624)>']
[2026-05-02 06:05:42] 2026-05-02 10:05:07,098 | INFO     | all workflow threads have been joined
[2026-05-02 06:05:42] 2026-05-02 10:05:07,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 06:05:42] 2026-05-02 10:05:07,099 | INFO     | traces error code: 0
[2026-05-02 06:05:42] 2026-05-02 10:05:07,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 06:05:42] 2026-05-02 10:05:19,533 | INFO     | PID=2320035 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 06:05:42] 2026-05-02 10:05:19,534 | INFO     | .. there are 24 such processes running
[2026-05-02 06:05:42] 2026-05-02 10:05:19,534 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 06:05:42] 2026-05-02 10:05:19,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 06:05:42] 2026-05-02 10:05:19,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 06:05:42] 2026-05-02 10:05:19,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 06:05:42] 2026-05-02 10:05:19,534 | INFO     | [monitor] control thread has ended
[2026-05-02 06:05:42] 2026-05-02 10:05:19,693 [wrapper] ==== pilot stdout END ====
[2026-05-02 06:05:42] 2026-05-02 10:05:19,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 06:05:42] 2026-05-02 10:05:19,699 [wrapper] pilotpid: 2320035
[2026-05-02 06:05:42] 2026-05-02 10:05:19,702 [wrapper] Pilot exit status: 0
[2026-05-02 06:05:42] 2026-05-02 10:05:19,714 [wrapper] pandaids: 7123316406
[2026-05-02 06:05:42] 2026-05-02 10:05:19,791 [wrapper] cleanup supervisor_pilot 3565879 2320036
[2026-05-02 06:05:42] 2026-05-02 10:05:19,795 [wrapper] Test setup, not cleaning
[2026-05-02 06:05:42] 2026-05-02 10:05:19,799 [wrapper] apfmon messages muted
[2026-05-02 06:05:42] 2026-05-02 10:05:19,802 [wrapper] ==== wrapper stdout END ====
[2026-05-02 06:05:42] 2026-05-02 10:05:19,806 [wrapper] ==== wrapper stderr END ====
[2026-05-02 06:05:42]  *** Error codes and diagnostics ***
[2026-05-02 06:05:42]     "exeErrorCode": 0,
[2026-05-02 06:05:42]     "pilotErrorCode": 0,
[2026-05-02 06:05:42]  *** Listing of results directory ***
[2026-05-02 06:05:42] total 420592
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas    683926 May  1 20:25 pilot3.tar.gz
[2026-05-02 06:05:42] -rwx------. 1 boincer umatlas     36322 May  1 20:28 runpilot2-wrapper.sh
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas      5631 May  1 20:29 queuedata.json
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas       100 May  2 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 06:05:42] -rwxr-xr-x. 1 boincer umatlas      7986 May  2 00:03 run_atlas
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas       105 May  2 00:03 job.xml
[2026-05-02 06:05:42] -rw-r--r--. 2 boincer umatlas 223424292 May  2 00:03 EVNT.48629115._000634.pool.root.1
[2026-05-02 06:05:42] -rw-r--r--. 2 boincer umatlas     15667 May  2 00:03 start_atlas.sh
[2026-05-02 06:05:42] drwxrwx--x. 2 boincer umatlas      4096 May  2 00:03 shared
[2026-05-02 06:05:42] -rw-r--r--. 2 boincer umatlas    697446 May  2 00:03 input.tar.gz
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas         0 May  2 00:03 boinc_lockfile
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas      2630 May  2 00:03 pandaJob.out
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas        57 May  2 00:03 setup.sh.local
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas   1002976 May  2 00:03 agis_schedconf.cvmfs.json
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas       441 May  2 00:04 workernode_map.json
[2026-05-02 06:05:42] drwx------. 5 boincer umatlas      4096 May  2 00:04 pilot3
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas       488 May  2 06:04 boinc_task_state.xml
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas 198470218 May  2 06:04 HITS.49645815._028061.pool.root.1
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas        95 May  2 06:04 pilot_heartbeat.json
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas      1040 May  2 06:04 memory_monitor_summary.json
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas      6756 May  2 06:04 init_data.xml
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas   1508687 May  2 06:04 agis_ddmendpoints.agis.ALL.json
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas    513284 May  2 06:04 log.49645815._028061.job.log.tgz.1
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas      6411 May  2 06:04 heartbeat_new.json
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas      6302 May  2 06:04 heartbeat.json
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas       823 May  2 06:05 pilotlog.txt
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas   1810967 May  2 06:05 log.49645815._028061.job.log.1
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas       357 May  2 06:05 output.list
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas       410 May  2 06:05 runtime_log
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas   2344960 May  2 06:05 result.tar.gz
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas      8972 May  2 06:05 runtime_log.err
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas       657 May  2 06:05 452e456b728e.diag
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas        28 May  2 06:05 wrapper_checkpoint.txt
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas      8192 May  2 06:05 boinc_mmap_file
[2026-05-02 06:05:42] -rw-r--r--. 1 boincer umatlas     21286 May  2 06:05 stderr.txt
[2026-05-02 06:05:42] HITS file was successfully produced:
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas 198470218 May  2 06:04 shared/HITS.pool.root.1
[2026-05-02 06:05:42]  *** Contents of shared directory: ***
[2026-05-02 06:05:42] total 415008
[2026-05-02 06:05:42] -rw-r--r--. 2 boincer umatlas 223424292 May  2 00:03 ATLAS.root_0
[2026-05-02 06:05:42] -rw-r--r--. 2 boincer umatlas     15667 May  2 00:03 start_atlas.sh
[2026-05-02 06:05:42] -rw-r--r--. 2 boincer umatlas    697446 May  2 00:03 input.tar.gz
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas 198470218 May  2 06:04 HITS.pool.root.1
[2026-05-02 06:05:42] -rw-------. 1 boincer umatlas   2344960 May  2 06:05 result.tar.gz
06:05:44 (2312428): run_atlas exited; CPU time 50129.848095
06:05:44 (2312428): called boinc_finish(0)

</stderr_txt>
]]>

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