Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:42:45 (1092953): wrapper (7.7.26015): starting
19:42:45 (1092953): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 19:42:45] Arguments: --nthreads 4
[2026-05-03 19:42:45] Threads: 4
[2026-05-03 19:42:45] Checking for CVMFS
[2026-05-03 19:42:45] No cvmfs_config command found, will try listing directly
[2026-05-03 19:42:45] CVMFS is ok
[2026-05-03 19:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 19:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 19:42:45] Further information can be found at the LHC@home message board.
[2026-05-03 19:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 19:42:45] Checking for apptainer binary...
[2026-05-03 19:42:45] which: no apptainer in ((null))
[2026-05-03 19:42:45] apptainer is not installed, using version from CVMFS
[2026-05-03 19:42:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 19:42:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-03 19:42:45] apptainer works
[2026-05-03 19:42:45] Set ATHENA_PROC_NUMBER=4
[2026-05-03 19:42:45] Set ATHENA_CORE_NUMBER=4
[2026-05-03 19:42:45] Starting ATLAS job with PandaID=7123337827
[2026-05-03 19:42:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 22:42:25]  *** The last 200 lines of the pilot log: ***
[2026-05-03 22:42:25] 2026-05-03 20:41:57,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,035 | INFO     | log transfer has been attempted: DONE
[2026-05-03 22:42:25] 2026-05-03 20:41:57,035 | INFO     | job 7123337827 has finished - writing final server update
[2026-05-03 22:42:25] 2026-05-03 20:41:57,035 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2298900/.job.ad'
[2026-05-03 22:42:25] 2026-05-03 20:41:57,036 | INFO     | total number of processed events: 400 (read)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,048 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7123337827/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,048 | INFO     | extracted standard info from prmon json
[2026-05-03 22:42:25] 2026-05-03 20:41:57,048 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 22:42:25] 2026-05-03 20:41:57,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 22:42:25] 2026-05-03 20:41:57,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 22:42:25] 2026-05-03 20:41:57,052 | INFO     | fitting pss+swap vs Time
[2026-05-03 22:42:25] 2026-05-03 20:41:57,052 | INFO     | sum of square deviations: 1690450300.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,053 | INFO     | sum of deviations: 11884060443.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,054 | INFO     | mean x (centered): 0.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,054 | INFO     | mean y: 2307640.3863636362
[2026-05-03 22:42:25] 2026-05-03 20:41:57,054 | INFO     | intersect: 2307640.3863636362
[2026-05-03 22:42:25] 2026-05-03 20:41:57,054 | INFO     | chi2: 2.1529440055003928
[2026-05-03 22:42:25] 2026-05-03 20:41:57,054 | INFO     | sum of square deviations: 1550429070.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,055 | INFO     | sum of deviations: 22392070137.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,056 | INFO     | mean x (centered): 0.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,056 | INFO     | mean y: 2318808.3859649124
[2026-05-03 22:42:25] 2026-05-03 20:41:57,056 | INFO     | intersect: 2318808.3859649124
[2026-05-03 22:42:25] 2026-05-03 20:41:57,056 | INFO     | chi2: 1.357639650378793
[2026-05-03 22:42:25] 2026-05-03 20:41:57,056 | INFO     | current chi2=1.357639650378793 (change=36.94031768080067 %)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,056 | INFO     | sum of square deviations: 1418361477.5
[2026-05-03 22:42:25] 2026-05-03 20:41:57,057 | INFO     | sum of deviations: 21674678782.999996
[2026-05-03 22:42:25] 2026-05-03 20:41:57,058 | INFO     | mean x (centered): 0.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,058 | INFO     | mean y: 2317979.7710843375
[2026-05-03 22:42:25] 2026-05-03 20:41:57,058 | INFO     | intersect: 2317979.7710843375
[2026-05-03 22:42:25] 2026-05-03 20:41:57,058 | INFO     | chi2: 1.3586217926328248
[2026-05-03 22:42:25] 2026-05-03 20:41:57,058 | INFO     | current chi2=1.3586217926328248 (change=-0.07234189527078688 %)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,058 | INFO     | right removable region: 165
[2026-05-03 22:42:25] 2026-05-03 20:41:57,059 | INFO     | sum of square deviations: 1550429070.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,059 | INFO     | sum of deviations: -10938275024.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,060 | INFO     | mean x (centered): 0.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,060 | INFO     | mean y: 2332139.128654971
[2026-05-03 22:42:25] 2026-05-03 20:41:57,060 | INFO     | intersect: 2332139.128654971
[2026-05-03 22:42:25] 2026-05-03 20:41:57,060 | INFO     | chi2: 0.8260099511774182
[2026-05-03 22:42:25] 2026-05-03 20:41:57,060 | INFO     | current chi2=0.8260099511774182 (change=61.633467983045165 %)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,060 | INFO     | sum of square deviations: 1418361477.5
[2026-05-03 22:42:25] 2026-05-03 20:41:57,061 | INFO     | sum of deviations: -10353927354.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | mean x (centered): 0.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | mean y: 2331448.9277108433
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | intersect: 2331448.9277108433
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | chi2: 0.8246276314678616
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | current chi2=0.8246276314678616 (change=0.1673490382998659 %)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | left removable region: 10
[2026-05-03 22:42:25] 2026-05-03 20:41:57,062 | INFO     | sum of square deviations: 1154663510.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,063 | INFO     | sum of deviations: 107682811.99999979
[2026-05-03 22:42:25] 2026-05-03 20:41:57,063 | INFO     | mean x (centered): 0.0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,063 | INFO     | mean y: 2343962.4322580644
[2026-05-03 22:42:25] 2026-05-03 20:41:57,064 | INFO     | intersect: 2343962.4322580644
[2026-05-03 22:42:25] 2026-05-03 20:41:57,064 | INFO     | chi2: 0.006029248493801375
[2026-05-03 22:42:25] 2026-05-03 20:41:57,064 | INFO     | current memory leak: 0.09 B/s (using 155 data points, chi2=0.01)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,064 | INFO     | could have reported an average CPU frequency of 2675 MHz (9 samples)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | ..............................
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . Timing measurements:
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . get job = 0 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . initial setup = 5 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . payload setup = 9 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . stage-in = 0 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . payload execution = 10707 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . stage-out = 0 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | . log creation = 0 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,065 | INFO     | ..............................
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | 
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | job summary report
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | --------------------------------------------------
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | PanDA job id: 7123337827
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | task id: 49263200
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | errors: (none)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | pilot state: finished 
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | transexitcode: 0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,159 | INFO     | exeerrorcode: 0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | exeerrordiag: 
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | exitcode: 0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | exitmsg: OK
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | cpuconsumptiontime: 41369 s
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | nevents: 400
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | neventsw: 0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | pid: 1101894
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | pgrp: 1101894
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | corecount: 4
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | event service: False
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | sizes: {0: 2275539, 1: 2277169, 11: 2277197, 10720: 2306164, 10722: 2315184, 10724: 2315626}
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | --------------------------------------------------
[2026-05-03 22:42:25] 2026-05-03 20:41:57,160 | INFO     | 
[2026-05-03 22:42:25] 2026-05-03 20:41:57,161 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-03 22:42:25] 2026-05-03 20:41:57,182 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 22:42:25] 2026-05-03 20:41:57,184 | INFO     | job 7123337827 has completed (purged errors)
[2026-05-03 22:42:25] 2026-05-03 20:41:57,185 | INFO     | overall cleanup function is called
[2026-05-03 22:42:25] 2026-05-03 20:41:58,192 | INFO     | --- collectZombieJob: --- 10, [1101894]
[2026-05-03 22:42:25] 2026-05-03 20:41:58,192 | INFO     | zombie collector waiting for pid 1101894
[2026-05-03 22:42:25] 2026-05-03 20:41:58,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 22:42:25] 2026-05-03 20:41:58,193 | INFO     | collected zombie processes
[2026-05-03 22:42:25] 2026-05-03 20:41:58,193 | INFO     | will attempt to kill all subprocesses of pid=1101894
[2026-05-03 22:42:25] 2026-05-03 20:41:58,253 | INFO     | PID=1096794 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-03 22:42:25] 2026-05-03 20:41:58,254 | INFO     | .. there are 10 such processes running
[2026-05-03 22:42:25] 2026-05-03 20:41:58,517 | INFO     | process IDs to be killed: [1101894] (in reverse order)
[2026-05-03 22:42:25] 2026-05-03 20:41:58,632 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 22:42:25] 2026-05-03 20:41:58,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 22:42:25] 2026-05-03 20:41:58,644 | INFO     | did not find any defunct processes belonging to 1101894
[2026-05-03 22:42:25] 2026-05-03 20:41:58,655 | INFO     | did not find any defunct processes belonging to 1101894
[2026-05-03 22:42:25] 2026-05-03 20:41:58,655 | INFO     | Ready for new job
[2026-05-03 22:42:25] 2026-05-03 20:41:58,657 | INFO     | ***************************************
[2026-05-03 22:42:25] 2026-05-03 20:41:58,658 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 22:42:25] 2026-05-03 20:41:58,658 | INFO     | ***************************************
[2026-05-03 22:42:25] 2026-05-03 20:41:58,658 | INFO     | 
[2026-05-03 22:42:25] 2026-05-03 20:41:58,661 | INFO     | architecture information:
[2026-05-03 22:42:25] 2026-05-03 20:41:58,662 | INFO     | executing command: cat /etc/os-release
[2026-05-03 22:42:25] 2026-05-03 20:41:58,680 | INFO     | cat /etc/os-release:
[2026-05-03 22:42:25] NAME="CentOS Linux"
[2026-05-03 22:42:25] VERSION="7 (Core)"
[2026-05-03 22:42:25] ID="centos"
[2026-05-03 22:42:25] ID_LIKE="rhel fedora"
[2026-05-03 22:42:25] VERSION_ID="7"
[2026-05-03 22:42:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 22:42:25] ANSI_COLOR="0;31"
[2026-05-03 22:42:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 22:42:25] HOME_URL="https://www.centos.org/"
[2026-05-03 22:42:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 22:42:25] 
[2026-05-03 22:42:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 22:42:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 22:42:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 22:42:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 22:42:25] 
[2026-05-03 22:42:25] 2026-05-03 20:41:58,680 | INFO     | ***************************************
[2026-05-03 22:42:25] 2026-05-03 20:41:59,183 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-03 22:42:25] 2026-05-03 20:41:59,202 | INFO     | sufficient remaining disk space (50368348160 B)
[2026-05-03 22:42:25] 2026-05-03 20:41:59,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 22:42:25] 2026-05-03 20:41:59,202 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 22:42:25] 2026-05-03 20:41:59,202 | INFO     | update_server=False
[2026-05-03 22:42:25] 2026-05-03 20:41:59,202 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 22:42:25] 2026-05-03 20:41:59,203 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-03 22:42:25] 2026-05-03 20:41:59,203 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 22:42:25] 2026-05-03 20:41:59,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 22:42:25] 2026-05-03 20:41:59,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 22:42:25] 2026-05-03 20:41:59,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 22:42:25] 2026-05-03 20:41:59,474 | INFO     | all data control threads have been joined
[2026-05-03 22:42:25] 2026-05-03 20:42:00,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 22:42:25] 2026-05-03 20:42:00,164 | INFO     | aborting loop
[2026-05-03 22:42:25] 2026-05-03 20:42:00,208 | INFO     | [job] retrieve thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 22:42:25] 2026-05-03 20:42:00,348 | INFO     | all payload control threads have been joined
[2026-05-03 22:42:25] 2026-05-03 20:42:00,395 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,480 | INFO     | [data] control thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,492 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,501 | INFO     | all job control threads have been joined
[2026-05-03 22:42:25] 2026-05-03 20:42:00,661 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,874 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,883 | INFO     | [payload] failed_post thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:00,887 | INFO     | [payload] validate_post thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:01,169 | INFO     | [job] job monitor thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:01,181 | INFO     | [data] copytool_in thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:01,354 | INFO     | [payload] control thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:01,507 | INFO     | [job] control thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:01,697 | INFO     | [job] validate thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:02,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 22:42:25] 2026-05-03 20:42:02,344 | INFO     | [data] copytool_out thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:03,174 | INFO     | [job] queue monitor thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:03,207 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 22:42:25] 2026-05-03 20:42:18,466 | INFO     | [monitor] cgroup control has ended
[2026-05-03 22:42:25] 2026-05-03 20:42:20,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22695944038208)>', '<ExcThread(monitor, started 22695707424512)>']
[2026-05-03 22:42:25] 2026-05-03 20:42:21,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 22:42:25] 2026-05-03 20:42:21,303 | INFO     | [monitor] control thread has ended
[2026-05-03 22:42:25] 2026-05-03 20:42:25,401 | INFO     | all workflow threads have been joined
[2026-05-03 22:42:25] 2026-05-03 20:42:25,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 22:42:25] 2026-05-03 20:42:25,402 | INFO     | traces error code: 0
[2026-05-03 22:42:25] 2026-05-03 20:42:25,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 22:42:25] 2026-05-03 20:42:25,592 [wrapper] ==== pilot stdout END ====
[2026-05-03 22:42:25] 2026-05-03 20:42:25,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 22:42:25] 2026-05-03 20:42:25,597 [wrapper] pilotpid: 1096794
[2026-05-03 22:42:25] 2026-05-03 20:42:25,599 [wrapper] Pilot exit status: 0
[2026-05-03 22:42:25] 2026-05-03 20:42:25,609 [wrapper] pandaids: 7123337827
[2026-05-03 22:42:25] 2026-05-03 20:42:25,684 [wrapper] cleanup supervisor_pilot 1317920 1096795
[2026-05-03 22:42:25] 2026-05-03 20:42:25,687 [wrapper] Test setup, not cleaning
[2026-05-03 22:42:25] 2026-05-03 20:42:25,690 [wrapper] apfmon messages muted
[2026-05-03 22:42:25] 2026-05-03 20:42:25,692 [wrapper] ==== wrapper stdout END ====
[2026-05-03 22:42:25] 2026-05-03 20:42:25,695 [wrapper] ==== wrapper stderr END ====
[2026-05-03 22:42:25]  *** Error codes and diagnostics ***
[2026-05-03 22:42:25]     "exeErrorCode": 0,
[2026-05-03 22:42:25]     "pilotErrorCode": 0,
[2026-05-03 22:42:25]  *** Listing of results directory ***
[2026-05-03 22:42:25] total 420496
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc    683926 May  2 02:25 pilot3.tar.gz
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc      5631 May  2 02:26 queuedata.json
[2026-05-03 22:42:25] -rwx------. 1 boinc boinc     36322 May  2 02:26 runpilot2-wrapper.sh
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc       100 May  3 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 22:42:25] -rwxr-xr-x. 1 boinc boinc      7986 May  3 19:42 run_atlas
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc       105 May  3 19:42 job.xml
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc      6483 May  3 19:42 init_data.xml
[2026-05-03 22:42:25] -rw-r--r--. 2 boinc boinc 223575388 May  3 19:42 EVNT.49263198._001876.pool.root.1
[2026-05-03 22:42:25] -rw-r--r--. 2 boinc boinc     15667 May  3 19:42 start_atlas.sh
[2026-05-03 22:42:25] drwxrwx--x. 2 boinc boinc      4096 May  3 19:42 shared
[2026-05-03 22:42:25] -rw-r--r--. 2 boinc boinc    697429 May  3 19:42 input.tar.gz
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc         0 May  3 19:42 boinc_lockfile
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc      2576 May  3 19:42 pandaJob.out
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc   1002987 May  3 19:42 agis_schedconf.cvmfs.json
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc   1508687 May  3 19:42 agis_ddmendpoints.agis.ALL.json
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc       452 May  3 19:43 workernode_map.json
[2026-05-03 22:42:25] drwx------. 5 boinc boinc      4096 May  3 19:43 pilot3
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc        95 May  3 22:41 pilot_heartbeat.json
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc 200203240 May  3 22:41 HITS.49263200._087405.pool.root.1
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc       487 May  3 22:41 boinc_task_state.xml
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc      1047 May  3 22:41 memory_monitor_summary.json
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc    317721 May  3 22:41 log.49263200._087405.job.log.tgz.1
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc      6426 May  3 22:41 heartbeat_new.json
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc      6317 May  3 22:41 heartbeat.json
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc      8192 May  3 22:42 boinc_mmap_file
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc      4560 May  3 22:42 pilotlog.txt
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc        27 May  3 22:42 wrapper_checkpoint.txt
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc   1020123 May  3 22:42 log.49263200._087405.job.log.1
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc       357 May  3 22:42 output.list
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc       410 May  3 22:42 runtime_log
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc   1351680 May  3 22:42 result.tar.gz
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc      8828 May  3 22:42 runtime_log.err
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc       664 May  3 22:42 44c11cdad1ef.diag
[2026-05-03 22:42:25] -rw-r--r--. 1 boinc boinc     20857 May  3 22:42 stderr.txt
[2026-05-03 22:42:25] HITS file was successfully produced:
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc 200203240 May  3 22:41 shared/HITS.pool.root.1
[2026-05-03 22:42:25]  *** Contents of shared directory: ***
[2026-05-03 22:42:25] total 415876
[2026-05-03 22:42:25] -rw-r--r--. 2 boinc boinc 223575388 May  3 19:42 ATLAS.root_0
[2026-05-03 22:42:25] -rw-r--r--. 2 boinc boinc     15667 May  3 19:42 start_atlas.sh
[2026-05-03 22:42:25] -rw-r--r--. 2 boinc boinc    697429 May  3 19:42 input.tar.gz
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc 200203240 May  3 22:41 HITS.pool.root.1
[2026-05-03 22:42:25] -rw-------. 1 boinc boinc   1351680 May  3 22:42 result.tar.gz
22:42:27 (1092953): run_atlas exited; CPU time 41742.456741
22:42:27 (1092953): called boinc_finish(0)

</stderr_txt>
]]>

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