Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:04:39 (3414): wrapper (7.7.26015): starting
11:04:39 (3414): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 11:04:39] Arguments: --nthreads 8
[2026-05-02 11:04:39] Threads: 8
[2026-05-02 11:04:39] Checking for CVMFS
[2026-05-02 11:04:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 11:04:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 11:04:40] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 11:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 11:04:40] 2.11.2.0 17563 24000 100012 159124 0 117 20365660 25165824 353 130560 0 7583006 99.897 6572473 10031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 11:04:40] CVMFS is ok
[2026-05-02 11:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 11:04:40] Checking for apptainer binary...
[2026-05-02 11:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 11:04:40] Running /usr/bin/apptainer --version
[2026-05-02 11:04:40] apptainer version 1.3.2-1.el7
[2026-05-02 11:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 11:04:42] cg-vwn377.simple-grid.lan
[2026-05-02 11:04:42] apptainer works
[2026-05-02 11:04:42] Set ATHENA_PROC_NUMBER=8
[2026-05-02 11:04:42] Set ATHENA_CORE_NUMBER=8
[2026-05-02 11:04:42] Starting ATLAS job with PandaID=7123318151
[2026-05-02 11:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 13:07:27]  *** The last 200 lines of the pilot log: ***
[2026-05-02 13:07:27] 2026-05-02 11:06:38,042 | INFO     | current chi2=0.043587305689834245 (change=97.23001090416803 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,042 | INFO     | sum of square deviations: 401533110.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,043 | INFO     | sum of deviations: 357981672.0000002
[2026-05-02 13:07:27] 2026-05-02 11:06:38,043 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,043 | INFO     | mean y: 2510734.1834862386
[2026-05-02 13:07:27] 2026-05-02 11:06:38,043 | INFO     | intersect: 2510734.1834862386
[2026-05-02 13:07:27] 2026-05-02 11:06:38,044 | INFO     | chi2: 0.021978175037328473
[2026-05-02 13:07:27] 2026-05-02 11:06:38,044 | INFO     | current chi2=0.021978175037328473 (change=49.57666070547144 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,044 | INFO     | sum of square deviations: 348769330.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,045 | INFO     | sum of deviations: 1558231305.5
[2026-05-02 13:07:27] 2026-05-02 11:06:38,045 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,045 | INFO     | mean y: 2507414.355769231
[2026-05-02 13:07:27] 2026-05-02 11:06:38,045 | INFO     | intersect: 2507414.355769231
[2026-05-02 13:07:27] 2026-05-02 11:06:38,045 | INFO     | chi2: 0.0008120302706182698
[2026-05-02 13:07:27] 2026-05-02 11:06:38,045 | INFO     | current chi2=0.0008120302706182698 (change=96.30528799939445 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,046 | INFO     | sum of square deviations: 300842850.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,046 | INFO     | sum of deviations: 972172798.9999998
[2026-05-02 13:07:27] 2026-05-02 11:06:38,046 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,047 | INFO     | mean y: 2509276.242424242
[2026-05-02 13:07:27] 2026-05-02 11:06:38,047 | INFO     | intersect: 2509276.242424242
[2026-05-02 13:07:27] 2026-05-02 11:06:38,047 | INFO     | chi2: 0.0002704108883913307
[2026-05-02 13:07:27] 2026-05-02 11:06:38,047 | INFO     | current chi2=0.0002704108883913307 (change=66.69940786992544 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,047 | INFO     | sum of square deviations: 257521107.5
[2026-05-02 13:07:27] 2026-05-02 11:06:38,048 | INFO     | sum of deviations: 619677802.5
[2026-05-02 13:07:27] 2026-05-02 11:06:38,048 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,048 | INFO     | mean y: 2510507.8191489363
[2026-05-02 13:07:27] 2026-05-02 11:06:38,048 | INFO     | intersect: 2510507.8191489363
[2026-05-02 13:07:27] 2026-05-02 11:06:38,049 | INFO     | chi2: 3.9119449312583277e-05
[2026-05-02 13:07:27] 2026-05-02 11:06:38,049 | INFO     | current chi2=3.9119449312583277e-05 (change=85.53333057507257 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,049 | INFO     | sum of square deviations: 218571540.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,050 | INFO     | sum of deviations: 483030574.0000001
[2026-05-02 13:07:27] 2026-05-02 11:06:38,050 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,050 | INFO     | mean y: 2511039.9775280897
[2026-05-02 13:07:27] 2026-05-02 11:06:38,050 | INFO     | intersect: 2511039.9775280897
[2026-05-02 13:07:27] 2026-05-02 11:06:38,050 | INFO     | chi2: 2.7767782781201512e-05
[2026-05-02 13:07:27] 2026-05-02 11:06:38,051 | INFO     | current chi2=2.7767782781201512e-05 (change=29.01796096534098 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,051 | INFO     | sum of square deviations: 183761585.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,051 | INFO     | sum of deviations: 403281827.5
[2026-05-02 13:07:27] 2026-05-02 11:06:38,051 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,052 | INFO     | mean y: 2511389.345238095
[2026-05-02 13:07:27] 2026-05-02 11:06:38,052 | INFO     | intersect: 2511389.345238095
[2026-05-02 13:07:27] 2026-05-02 11:06:38,052 | INFO     | chi2: 2.7716745942957333e-05
[2026-05-02 13:07:27] 2026-05-02 11:06:38,052 | INFO     | current chi2=2.7716745942957333e-05 (change=0.18379875212338048 %)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,052 | INFO     | left removable region: 35
[2026-05-02 13:07:27] 2026-05-02 11:06:38,053 | INFO     | sum of square deviations: 147126479.5
[2026-05-02 13:07:27] 2026-05-02 11:06:38,053 | INFO     | sum of deviations: 306347154.50000006
[2026-05-02 13:07:27] 2026-05-02 11:06:38,053 | INFO     | mean x (centered): 0.0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,053 | INFO     | mean y: 2510903.4743589745
[2026-05-02 13:07:27] 2026-05-02 11:06:38,054 | INFO     | intersect: 2510903.4743589745
[2026-05-02 13:07:27] 2026-05-02 11:06:38,054 | INFO     | chi2: 2.5916737063150453e-05
[2026-05-02 13:07:27] 2026-05-02 11:06:38,054 | INFO     | current memory leak: 2.08 B/s (using 78 data points, chi2=0.00)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,054 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | ..............................
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | . Timing measurements:
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | . get job = 0 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | . initial setup = 8 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | . payload setup = 18 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | . stage-in = 0 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,055 | INFO     | . payload execution = 7260 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,056 | INFO     | . stage-out = 1 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,056 | INFO     | . log creation = 0 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,056 | INFO     | ..............................
[2026-05-02 13:07:27] 2026-05-02 11:06:38,169 | INFO     | 
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | job summary report
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | --------------------------------------------------
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | PanDA job id: 7123318151
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | task id: 49263200
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | errors: (none)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 13:07:27] 2026-05-02 11:06:38,170 | INFO     | pilot state: finished 
[2026-05-02 13:07:27] 2026-05-02 11:06:38,171 | INFO     | transexitcode: 0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,171 | INFO     | exeerrorcode: 0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,171 | INFO     | exeerrordiag: 
[2026-05-02 13:07:27] 2026-05-02 11:06:38,171 | INFO     | exitcode: 0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,171 | INFO     | exitmsg: OK
[2026-05-02 13:07:27] 2026-05-02 11:06:38,171 | INFO     | cpuconsumptiontime: 53652 s
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | nevents: 400
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | neventsw: 0
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | pid: 12176
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | pgrp: 12176
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | corecount: 8
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | event service: False
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | sizes: {0: 2275301, 1: 2277186, 2: 2277186, 7282: 2304603, 7283: 2313601, 7285: 2313657, 7286: 2313979}
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | --------------------------------------------------
[2026-05-02 13:07:27] 2026-05-02 11:06:38,172 | INFO     | 
[2026-05-02 13:07:27] 2026-05-02 11:06:38,173 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 13:07:27] 2026-05-02 11:06:38,195 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,195 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 13:07:27] 2026-05-02 11:06:38,197 | INFO     | job 7123318151 has completed (purged errors)
[2026-05-02 13:07:27] 2026-05-02 11:06:38,198 | INFO     | overall cleanup function is called
[2026-05-02 13:07:27] 2026-05-02 11:06:39,205 | INFO     | --- collectZombieJob: --- 10, [12176]
[2026-05-02 13:07:27] 2026-05-02 11:06:39,205 | INFO     | zombie collector waiting for pid 12176
[2026-05-02 13:07:27] 2026-05-02 11:06:39,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 13:07:27] 2026-05-02 11:06:39,206 | INFO     | collected zombie processes
[2026-05-02 13:07:27] 2026-05-02 11:06:39,206 | INFO     | will attempt to kill all subprocesses of pid=12176
[2026-05-02 13:07:27] 2026-05-02 11:06:39,274 | INFO     | process IDs to be killed: [12176] (in reverse order)
[2026-05-02 13:07:27] 2026-05-02 11:06:39,353 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 13:07:27] 2026-05-02 11:06:39,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 13:07:27] 2026-05-02 11:06:39,356 | INFO     | did not find any defunct processes belonging to 12176
[2026-05-02 13:07:27] 2026-05-02 11:06:39,357 | INFO     | did not find any defunct processes belonging to 12176
[2026-05-02 13:07:27] 2026-05-02 11:06:39,358 | INFO     | Ready for new job
[2026-05-02 13:07:27] 2026-05-02 11:06:39,359 | INFO     | ***************************************
[2026-05-02 13:07:27] 2026-05-02 11:06:39,360 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 13:07:27] 2026-05-02 11:06:39,360 | INFO     | ***************************************
[2026-05-02 13:07:27] 2026-05-02 11:06:39,360 | INFO     | 
[2026-05-02 13:07:27] 2026-05-02 11:06:39,361 | INFO     | pilot is running in a VM
[2026-05-02 13:07:27] 2026-05-02 11:06:39,361 | INFO     | architecture information:
[2026-05-02 13:07:27] 2026-05-02 11:06:39,363 | INFO     | executing command: cat /etc/os-release
[2026-05-02 13:07:27] 2026-05-02 11:06:39,392 | INFO     | cat /etc/os-release:
[2026-05-02 13:07:27] NAME="CentOS Linux"
[2026-05-02 13:07:27] VERSION="7 (Core)"
[2026-05-02 13:07:27] ID="centos"
[2026-05-02 13:07:27] ID_LIKE="rhel fedora"
[2026-05-02 13:07:27] VERSION_ID="7"
[2026-05-02 13:07:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 13:07:27] ANSI_COLOR="0;31"
[2026-05-02 13:07:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 13:07:27] HOME_URL="https://www.centos.org/"
[2026-05-02 13:07:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 13:07:27] 
[2026-05-02 13:07:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 13:07:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 13:07:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 13:07:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 13:07:27] 
[2026-05-02 13:07:27] 2026-05-02 11:06:39,392 | INFO     | ***************************************
[2026-05-02 13:07:27] 2026-05-02 11:06:39,897 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 13:07:27] 2026-05-02 11:06:39,926 | INFO     | sufficient remaining disk space (497739104256 B)
[2026-05-02 13:07:27] 2026-05-02 11:06:39,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 13:07:27] 2026-05-02 11:06:39,927 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 13:07:27] 2026-05-02 11:06:39,927 | INFO     | update_server=False
[2026-05-02 13:07:27] 2026-05-02 11:06:39,927 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 13:07:27] 2026-05-02 11:06:39,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 13:07:27] 2026-05-02 11:06:40,028 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 13:07:27] 2026-05-02 11:06:40,028 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 13:07:27] 2026-05-02 11:06:40,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 13:07:27] 2026-05-02 11:06:40,028 | INFO     | will abort loop
[2026-05-02 13:07:27] 2026-05-02 11:06:40,527 | INFO     | all data control threads have been joined
[2026-05-02 13:07:27] 2026-05-02 11:06:40,538 | INFO     | all payload control threads have been joined
[2026-05-02 13:07:27] 2026-05-02 11:06:40,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 13:07:27] 2026-05-02 11:06:40,933 | INFO     | [job] retrieve thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:40,933 | INFO     | [job] queue monitor thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:40,988 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,014 | INFO     | [data] copytool_in thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,034 | INFO     | [job] job monitor thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,171 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,216 | INFO     | [payload] failed_post thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,343 | INFO     | all job control threads have been joined
[2026-05-02 13:07:27] 2026-05-02 11:06:41,475 | INFO     | [payload] validate_post thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,532 | INFO     | [data] control thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,543 | INFO     | [payload] control thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,920 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:41,994 | INFO     | [job] validate thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:42,348 | INFO     | [job] control thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:42,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 13:07:27] 2026-05-02 11:06:42,792 | INFO     | [data] copytool_out thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:46,671 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:06:50,588 | INFO     | job.realtimelogging is not enabled
[2026-05-02 13:07:27] 2026-05-02 11:06:51,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 13:07:27] 2026-05-02 11:07:09,920 | INFO     | PID=7581 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 13:07:27] 2026-05-02 11:07:09,920 | INFO     | .. there are 2 such processes running
[2026-05-02 13:07:27] 2026-05-02 11:07:09,921 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 13:07:27] 2026-05-02 11:07:09,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 13:07:27] 2026-05-02 11:07:09,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 13:07:27] 2026-05-02 11:07:21,812 | INFO     | [monitor] cgroup control has ended
[2026-05-02 13:07:27] 2026-05-02 11:07:22,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053424518976)>', '<ExcThread(monitor, started 140052751435520)>']
[2026-05-02 13:07:27] 2026-05-02 11:07:22,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 13:07:27] 2026-05-02 11:07:22,991 | INFO     | [monitor] control thread has ended
[2026-05-02 13:07:27] 2026-05-02 11:07:27,115 | INFO     | all workflow threads have been joined
[2026-05-02 13:07:27] 2026-05-02 11:07:27,115 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 13:07:27] 2026-05-02 11:07:27,116 | INFO     | traces error code: 0
[2026-05-02 13:07:27] 2026-05-02 11:07:27,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 13:07:27] 2026-05-02 11:07:27,267 [wrapper] ==== pilot stdout END ====
[2026-05-02 13:07:27] 2026-05-02 11:07:27,271 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 13:07:27] 2026-05-02 11:07:27,275 [wrapper] pilotpid: 7581
[2026-05-02 13:07:27] 2026-05-02 11:07:27,278 [wrapper] Pilot exit status: 0
[2026-05-02 13:07:27] 2026-05-02 11:07:27,296 [wrapper] pandaids: 7123318151
[2026-05-02 13:07:27] 2026-05-02 11:07:27,334 [wrapper] cleanup supervisor_pilot  4263 7582
[2026-05-02 13:07:27] 2026-05-02 11:07:27,338 [wrapper] Test setup, not cleaning
[2026-05-02 13:07:27] 2026-05-02 11:07:27,350 [wrapper] apfmon messages muted
[2026-05-02 13:07:27] 2026-05-02 11:07:27,354 [wrapper] ==== wrapper stdout END ====
[2026-05-02 13:07:27] 2026-05-02 11:07:27,358 [wrapper] ==== wrapper stderr END ====
[2026-05-02 13:07:27]  *** Error codes and diagnostics ***
[2026-05-02 13:07:27]     "exeErrorCode": 0,
[2026-05-02 13:07:27]     "pilotErrorCode": 0,
[2026-05-02 13:07:27]  *** Listing of results directory ***
[2026-05-02 13:07:27] total 410524
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc    683926 May  2 02:25 pilot3.tar.gz
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc      5631 May  2 02:26 queuedata.json
[2026-05-02 13:07:27] -rwx------. 1 boinc boinc     36322 May  2 02:26 runpilot2-wrapper.sh
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc       100 May  2 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 13:07:27] -rwxr-xr-x. 1 boinc boinc      7986 May  2 11:04 run_atlas
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc       105 May  2 11:04 job.xml
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc      6307 May  2 11:04 init_data.xml
[2026-05-02 13:07:27] -rw-r--r--. 2 boinc boinc 222641347 May  2 11:04 EVNT.49263198._001866.pool.root.1
[2026-05-02 13:07:27] -rw-r--r--. 2 boinc boinc     15667 May  2 11:04 start_atlas.sh
[2026-05-02 13:07:27] drwxrwx--x. 2 boinc boinc        68 May  2 11:04 shared
[2026-05-02 13:07:27] -rw-r--r--. 2 boinc boinc    697424 May  2 11:04 input.tar.gz
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc         0 May  2 11:04 boinc_lockfile
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc      2576 May  2 11:04 pandaJob.out
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc   1002968 May  2 11:05 agis_schedconf.cvmfs.json
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc   1508687 May  2 11:05 agis_ddmendpoints.agis.ALL.json
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc       415 May  2 11:05 workernode_map.json
[2026-05-02 13:07:27] drwx------. 5 boinc boinc      4096 May  2 11:05 pilot3
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc       487 May  2 13:05 boinc_task_state.xml
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc 191501146 May  2 13:05 HITS.49263200._087198.pool.root.1
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc      1015 May  2 13:06 memory_monitor_summary.json
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc    342304 May  2 13:06 log.49263200._087198.job.log.tgz.1
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc      6333 May  2 13:06 heartbeat_new.json
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc      6224 May  2 13:06 heartbeat.json
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc        95 May  2 13:07 pilot_heartbeat.json
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc        27 May  2 13:07 wrapper_checkpoint.txt
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc      8192 May  2 13:07 boinc_mmap_file
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc      5140 May  2 13:07 pilotlog.txt
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc    710654 May  2 13:07 log.49263200._087198.job.log.1
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc       357 May  2 13:07 output.list
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc       410 May  2 13:07 runtime_log
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc   1075200 May  2 13:07 result.tar.gz
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc      8438 May  2 13:07 runtime_log.err
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc       652 May  2 13:07 44c05d7e6123.diag
[2026-05-02 13:07:27] -rw-r--r--. 1 boinc boinc     20565 May  2 13:07 stderr.txt
[2026-05-02 13:07:27] HITS file was successfully produced:
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc 191501146 May  2 13:05 shared/HITS.pool.root.1
[2026-05-02 13:07:27]  *** Contents of shared directory: ***
[2026-05-02 13:07:27] total 406192
[2026-05-02 13:07:27] -rw-r--r--. 2 boinc boinc 222641347 May  2 11:04 ATLAS.root_0
[2026-05-02 13:07:27] -rw-r--r--. 2 boinc boinc     15667 May  2 11:04 start_atlas.sh
[2026-05-02 13:07:27] -rw-r--r--. 2 boinc boinc    697424 May  2 11:04 input.tar.gz
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc 191501146 May  2 13:05 HITS.pool.root.1
[2026-05-02 13:07:27] -rw-------. 1 boinc boinc   1075200 May  2 13:07 result.tar.gz
13:07:29 (3414): run_atlas exited; CPU time 53701.154986
13:07:29 (3414): called boinc_finish(0)

</stderr_txt>
]]>

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