Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:00:20 (2962924): wrapper (7.7.26015): starting
22:00:20 (2962924): wrapper: running run_atlas (--nthreads 12)
[2026-05-02 22:00:20] Arguments: --nthreads 12
[2026-05-02 22:00:20] Threads: 12
[2026-05-02 22:00:20] Checking for CVMFS
[2026-05-02 22:00:20] No cvmfs_config command found, will try listing directly
[2026-05-02 22:00:20] CVMFS is ok
[2026-05-02 22:00:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 22:00:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 22:00:20] Further information can be found at the LHC@home message board.
[2026-05-02 22:00:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 22:00:20] Checking for apptainer binary...
[2026-05-02 22:00:20] which: no apptainer in ((null))
[2026-05-02 22:00:20] apptainer is not installed, using version from CVMFS
[2026-05-02 22:00:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 22:00:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot240/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-05-02 22:00:20] apptainer works
[2026-05-02 22:00:20] Set ATHENA_PROC_NUMBER=12
[2026-05-02 22:00:20] Set ATHENA_CORE_NUMBER=12
[2026-05-02 22:00:20] Starting ATLAS job with PandaID=7123013240
[2026-05-02 22:00:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot240/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 22:33:41]  *** The last 200 lines of the pilot log: ***
[2026-05-02 22:33:41]  domain=
[2026-05-02 22:33:41]  filesize=327606
[2026-05-02 22:33:41]  filetype=log
[2026-05-02 22:33:41]  guid=fbfb1131-ee33-41f3-95fe-1d396d3167fa
[2026-05-02 22:33:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-02 22:33:41]  is_altstaged=None
[2026-05-02 22:33:41]  is_tar=False
[2026-05-02 22:33:41]  lfn=log.50017102._000854.job.log.tgz.1
[2026-05-02 22:33:41]  mtime=0
[2026-05-02 22:33:41]  protocol_id=None
[2026-05-02 22:33:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-02 22:33:41]  replicas=None
[2026-05-02 22:33:41]  scope=mc23_13p6TeV
[2026-05-02 22:33:41]  status=None
[2026-05-02 22:33:41]  status_code=0
[2026-05-02 22:33:41]  storage_token=
[2026-05-02 22:33:41]  surl=/var/lib/boinc/var/slot240/slots/1/PanDA_Pilot-7123013240/log.50017102._000854.job.log.tgz.1
[2026-05-02 22:33:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/b8/log.50017102._000854.job.log.tgz.1
[2026-05-02 22:33:41]  workdir=None
[2026-05-02 22:33:41] ]
[2026-05-02 22:33:41] 2026-05-02 20:32:43,170 | INFO     | transferring file log.50017102._000854.job.log.tgz.1 from /var/lib/boinc/var/slot240/slots/1/PanDA_Pilot-7123013240/log.50017102._000854.job.log.tgz.1 to /var/lib/
[2026-05-02 22:33:41] 2026-05-02 20:32:43,170 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot240/slots/1/PanDA_Pilot-7123013240/log.50017102._000854.job.log.tgz.1 /var/lib/boinc/var/slot240/slots/1/
[2026-05-02 22:33:41] 2026-05-02 20:32:43,187 | INFO     | adding to output.list: log.50017102._000854.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/b8/log.50017102._000854.job.log.tg
[2026-05-02 22:33:41] 2026-05-02 20:32:43,188 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-02 22:33:41] 2026-05-02 20:32:43,188 | INFO     | summary of transferred files:
[2026-05-02 22:33:41] 2026-05-02 20:32:43,188 | INFO     |  -- lfn=log.50017102._000854.job.log.tgz.1, status_code=0, status=transferred
[2026-05-02 22:33:41] 2026-05-02 20:32:43,188 | INFO     | stage-out finished correctly
[2026-05-02 22:33:41] 2026-05-02 20:32:44,263 | INFO     | monitor loop #149: job 0:7123013240 is in state 'finished'
[2026-05-02 22:33:41] 2026-05-02 20:32:44,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 22:33:41] 2026-05-02 20:32:46,005 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 22:33:41] 2026-05-02 20:32:46,769 | INFO     | monitor loop #150: job 0:7123013240 is in state 'finished'
[2026-05-02 22:33:41] 2026-05-02 20:32:46,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,938 | INFO     | job 7123013240 has state=finished
[2026-05-02 22:33:41] 2026-05-02 20:32:48,938 | INFO     | preparing for final server update for job 7123013240 in state='finished'
[2026-05-02 22:33:41] 2026-05-02 20:32:48,938 | INFO     | reading metadata from: /var/lib/boinc/var/slot240/slots/1/PanDA_Pilot-7123013240/jobReport.json
[2026-05-02 22:33:41] 2026-05-02 20:32:48,940 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot240/slots/1/workernode_map.json
[2026-05-02 22:33:41] 2026-05-02 20:32:48,940 | INFO     | this job has now completed (state=finished)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,940 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,940 | INFO     | log transfer has been attempted: DONE
[2026-05-02 22:33:41] 2026-05-02 20:32:48,940 | INFO     | job 7123013240 has finished - writing final server update
[2026-05-02 22:33:41] 2026-05-02 20:32:48,941 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3753332/.job.ad'
[2026-05-02 22:33:41] 2026-05-02 20:32:48,941 | INFO     | total number of processed events: 400 (read)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,960 | INFO     | using path: /var/lib/boinc/var/slot240/slots/1/PanDA_Pilot-7123013240/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,960 | INFO     | extracted standard info from prmon json
[2026-05-02 22:33:41] 2026-05-02 20:32:48,961 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 22:33:41] 2026-05-02 20:32:48,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 22:33:41] 2026-05-02 20:32:48,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | fitting pss+swap vs Time
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | sum of square deviations: 4837300.0
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | sum of deviations: 39422897.0
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | mean x (centered): 0.0
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | mean y: 2711860.32
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | intersect: 2711860.32
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | chi2: 0.0002243485102512517
[2026-05-02 22:33:41] 2026-05-02 20:32:48,962 | INFO     | current memory leak: 8.15 B/s (using 25 data points, chi2=0.00)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | could have reported an average CPU frequency of 3595 MHz (5 samples)
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | ..............................
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . Timing measurements:
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . get job = 0 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . initial setup = 4 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . payload setup = 6 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . stage-in = 0 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . payload execution = 1909 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . stage-out = 0 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | . log creation = 0 s
[2026-05-02 22:33:41] 2026-05-02 20:32:48,963 | INFO     | ..............................
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | 
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | job summary report
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | --------------------------------------------------
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | PanDA job id: 7123013240
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | task id: 50017102
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | errors: (none)
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | pilot state: finished 
[2026-05-02 22:33:41] 2026-05-02 20:32:49,013 | INFO     | transexitcode: 0
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | exeerrorcode: 0
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | exeerrordiag: 
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | exitcode: 0
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | exitmsg: OK
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | cpuconsumptiontime: 20066 s
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | nevents: 400
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | neventsw: 0
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | pid: 2973360
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | pgrp: 2973360
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | corecount: 12
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | event service: False
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | sizes: {0: 2274574, 1: 2277072, 11: 2277072, 1920: 2302006, 1921: 2311028, 1924: 2311084, 1927: 2311438}
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | --------------------------------------------------
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | 
[2026-05-02 22:33:41] 2026-05-02 20:32:49,014 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot240/slots/1
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | job 7123013240 has completed (purged errors)
[2026-05-02 22:33:41] 2026-05-02 20:32:49,034 | INFO     | overall cleanup function is called
[2026-05-02 22:33:41] 2026-05-02 20:32:50,041 | INFO     | --- collectZombieJob: --- 10, [2973360]
[2026-05-02 22:33:41] 2026-05-02 20:32:50,041 | INFO     | zombie collector waiting for pid 2973360
[2026-05-02 22:33:41] 2026-05-02 20:32:50,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 22:33:41] 2026-05-02 20:32:50,041 | INFO     | collected zombie processes
[2026-05-02 22:33:41] 2026-05-02 20:32:50,041 | INFO     | will attempt to kill all subprocesses of pid=2973360
[2026-05-02 22:33:41] 2026-05-02 20:32:50,339 | INFO     | process IDs to be killed: [2973360] (in reverse order)
[2026-05-02 22:33:41] 2026-05-02 20:32:50,482 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 22:33:41] 2026-05-02 20:32:50,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 22:33:41] 2026-05-02 20:32:50,505 | INFO     | did not find any defunct processes belonging to 2973360
[2026-05-02 22:33:41] 2026-05-02 20:32:50,528 | INFO     | did not find any defunct processes belonging to 2973360
[2026-05-02 22:33:41] 2026-05-02 20:32:50,528 | INFO     | Ready for new job
[2026-05-02 22:33:41] 2026-05-02 20:32:50,530 | INFO     | ***************************************
[2026-05-02 22:33:41] 2026-05-02 20:32:50,530 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 22:33:41] 2026-05-02 20:32:50,530 | INFO     | ***************************************
[2026-05-02 22:33:41] 2026-05-02 20:32:50,530 | INFO     | 
[2026-05-02 22:33:41] 2026-05-02 20:32:50,535 | INFO     | architecture information:
[2026-05-02 22:33:41] 2026-05-02 20:32:50,536 | INFO     | executing command: cat /etc/os-release
[2026-05-02 22:33:41] 2026-05-02 20:32:50,552 | INFO     | cat /etc/os-release:
[2026-05-02 22:33:41] NAME="CentOS Linux"
[2026-05-02 22:33:41] VERSION="7 (Core)"
[2026-05-02 22:33:41] ID="centos"
[2026-05-02 22:33:41] ID_LIKE="rhel fedora"
[2026-05-02 22:33:41] VERSION_ID="7"
[2026-05-02 22:33:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 22:33:41] ANSI_COLOR="0;31"
[2026-05-02 22:33:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 22:33:41] HOME_URL="https://www.centos.org/"
[2026-05-02 22:33:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 22:33:41] 
[2026-05-02 22:33:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 22:33:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 22:33:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 22:33:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 22:33:41] 
[2026-05-02 22:33:41] 2026-05-02 20:32:50,552 | INFO     | ***************************************
[2026-05-02 22:33:41] 2026-05-02 20:32:51,055 | INFO     | executing command: df -mP /var/lib/boinc/var/slot240/slots/1
[2026-05-02 22:33:41] 2026-05-02 20:32:51,070 | INFO     | sufficient remaining disk space (228917772288 B)
[2026-05-02 22:33:41] 2026-05-02 20:32:51,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 22:33:41] 2026-05-02 20:32:51,070 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 22:33:41] 2026-05-02 20:32:51,070 | INFO     | update_server=False
[2026-05-02 22:33:41] 2026-05-02 20:32:51,070 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 22:33:41] 2026-05-02 20:32:51,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 22:33:41] 2026-05-02 20:32:51,071 | INFO     | aborting loop
[2026-05-02 22:33:41] 2026-05-02 20:32:51,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 22:33:41] 2026-05-02 20:32:51,934 | INFO     | all job control threads have been joined
[2026-05-02 22:33:41] 2026-05-02 20:32:52,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 22:33:41] 2026-05-02 20:32:52,075 | INFO     | [job] retrieve thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:52,075 | INFO     | [job] job monitor thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:52,106 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:52,125 | INFO     | all data control threads have been joined
[2026-05-02 22:33:41] 2026-05-02 20:32:52,366 | INFO     | all payload control threads have been joined
[2026-05-02 22:33:41] 2026-05-02 20:32:52,454 | INFO     | [payload] failed_post thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:52,941 | INFO     | [job] control thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,045 | INFO     | [payload] validate_post thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,106 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,106 | INFO     | [job] validate thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,131 | INFO     | [data] control thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,200 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,254 | INFO     | [data] copytool_out thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,261 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,372 | INFO     | [data] copytool_in thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:53,372 | INFO     | [payload] control thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:54,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 22:33:41] 2026-05-02 20:32:55,029 | INFO     | [job] queue monitor thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:32:56,066 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 22:33:41] 2026-05-02 20:33:20,736 | INFO     | PID=2967592 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 22:33:41] 2026-05-02 20:33:20,736 | INFO     | .. there are 16 such processes running
[2026-05-02 22:33:41] 2026-05-02 20:33:20,737 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 22:33:41] 2026-05-02 20:33:20,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 22:33:41] 2026-05-02 20:33:20,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 22:33:41] 2026-05-02 20:33:34,254 | INFO     | [monitor] cgroup control has ended
[2026-05-02 22:33:41] 2026-05-02 20:33:35,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22854641686336)>', '<ExcThread(monitor, started 22854398904064)>']
[2026-05-02 22:33:41] 2026-05-02 20:33:36,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 22:33:41] 2026-05-02 20:33:36,818 | INFO     | [monitor] control thread has ended
[2026-05-02 22:33:41] 2026-05-02 20:33:40,899 | INFO     | all workflow threads have been joined
[2026-05-02 22:33:41] 2026-05-02 20:33:40,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 22:33:41] 2026-05-02 20:33:40,899 | INFO     | traces error code: 0
[2026-05-02 22:33:41] 2026-05-02 20:33:40,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 22:33:41] 2026-05-02 20:33:41,058 [wrapper] ==== pilot stdout END ====
[2026-05-02 22:33:41] 2026-05-02 20:33:41,060 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 22:33:41] 2026-05-02 20:33:41,063 [wrapper] pilotpid: 2967592
[2026-05-02 22:33:41] 2026-05-02 20:33:41,066 [wrapper] Pilot exit status: 0
[2026-05-02 22:33:41] 2026-05-02 20:33:41,075 [wrapper] pandaids: 7123013240
[2026-05-02 22:33:41] 2026-05-02 20:33:41,176 [wrapper] cleanup supervisor_pilot 3255209 2967593
[2026-05-02 22:33:41] 2026-05-02 20:33:41,179 [wrapper] Test setup, not cleaning
[2026-05-02 22:33:41] 2026-05-02 20:33:41,182 [wrapper] apfmon messages muted
[2026-05-02 22:33:41] 2026-05-02 20:33:41,184 [wrapper] ==== wrapper stdout END ====
[2026-05-02 22:33:41] 2026-05-02 20:33:41,187 [wrapper] ==== wrapper stderr END ====
[2026-05-02 22:33:41]  *** Error codes and diagnostics ***
[2026-05-02 22:33:41]     "exeErrorCode": 0,
[2026-05-02 22:33:41]     "pilotErrorCode": 0,
[2026-05-02 22:33:41]  *** Listing of results directory ***
[2026-05-02 22:33:41] total 480588
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc    683926 Apr 30 23:54 pilot3.tar.gz
[2026-05-02 22:33:41] -rwx------. 1 boinc boinc     36322 Apr 30 23:55 runpilot2-wrapper.sh
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc      5631 Apr 30 23:55 queuedata.json
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc       100 May  2 22:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 22:33:41] -rwxr-xr-x. 1 boinc boinc      7986 May  2 22:00 run_atlas
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc       105 May  2 22:00 job.xml
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc      6631 May  2 22:00 init_data.xml
[2026-05-02 22:33:41] -rw-r--r--. 2 boinc boinc 317201632 May  2 22:00 EVNT.50017097._000035.pool.root.1
[2026-05-02 22:33:41] -rw-r--r--. 2 boinc boinc     15667 May  2 22:00 start_atlas.sh
[2026-05-02 22:33:41] drwxrwx--x. 2 boinc boinc      4096 May  2 22:00 shared
[2026-05-02 22:33:41] -rw-r--r--. 2 boinc boinc    697396 May  2 22:00 input.tar.gz
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc         0 May  2 22:00 boinc_lockfile
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc      2524 May  2 22:00 pandaJob.out
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc   1002983 May  2 22:00 agis_schedconf.cvmfs.json
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc   1508687 May  2 22:00 agis_ddmendpoints.agis.ALL.json
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc       445 May  2 22:00 workernode_map.json
[2026-05-02 22:33:41] drwx------. 5 boinc boinc      4096 May  2 22:00 pilot3
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc       487 May  2 22:32 boinc_task_state.xml
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc 169669342 May  2 22:32 HITS.50017102._000854.pool.root.1
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc      1027 May  2 22:32 memory_monitor_summary.json
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc    327606 May  2 22:32 log.50017102._000854.job.log.tgz.1
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc      6370 May  2 22:32 heartbeat_new.json
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc      6261 May  2 22:32 heartbeat.json
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc      8192 May  2 22:33 boinc_mmap_file
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc        27 May  2 22:33 wrapper_checkpoint.txt
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc        95 May  2 22:33 pilot_heartbeat.json
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc      4834 May  2 22:33 pilotlog.txt
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc    229931 May  2 22:33 log.50017102._000854.job.log.1
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc       357 May  2 22:33 output.list
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc       410 May  2 22:33 runtime_log
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc    573440 May  2 22:33 result.tar.gz
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc      8846 May  2 22:33 runtime_log.err
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc       660 May  2 22:33 cfd330de85a6.diag
[2026-05-02 22:33:41] -rw-r--r--. 1 boinc boinc     20952 May  2 22:33 stderr.txt
[2026-05-02 22:33:41] HITS file was successfully produced:
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc 169669342 May  2 22:32 shared/HITS.pool.root.1
[2026-05-02 22:33:41]  *** Contents of shared directory: ***
[2026-05-02 22:33:41] total 476732
[2026-05-02 22:33:41] -rw-r--r--. 2 boinc boinc 317201632 May  2 22:00 ATLAS.root_0
[2026-05-02 22:33:41] -rw-r--r--. 2 boinc boinc     15667 May  2 22:00 start_atlas.sh
[2026-05-02 22:33:41] -rw-r--r--. 2 boinc boinc    697396 May  2 22:00 input.tar.gz
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc 169669342 May  2 22:32 HITS.pool.root.1
[2026-05-02 22:33:41] -rw-------. 1 boinc boinc    573440 May  2 22:33 result.tar.gz
22:33:42 (2962924): run_atlas exited; CPU time 20123.205706
22:33:42 (2962924): called boinc_finish(0)

</stderr_txt>
]]>

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