Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:42:07 (12093): wrapper (7.7.26015): starting
13:42:07 (12093): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 13:42:07] Arguments: --nthreads 8
[2026-05-02 13:42:07] Threads: 8
[2026-05-02 13:42:07] Checking for CVMFS
[2026-05-02 13:42:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 13:42:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 13:42:10] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 13:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 13:42:12] 2.11.2.0 26242 24143 102412 159130 3 53 22814485 25165825 96 130560 0 7745732 99.867 6313802 8692 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 13:42:12] CVMFS is ok
[2026-05-02 13:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 13:42:12] Checking for apptainer binary...
[2026-05-02 13:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 13:42:12] Running /usr/bin/apptainer --version
[2026-05-02 13:42:12] apptainer version 1.3.2-1.el7
[2026-05-02 13:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 13:42:18] cg-vwn414.simple-grid.lan
[2026-05-02 13:42:18] apptainer works
[2026-05-02 13:42:18] Set ATHENA_PROC_NUMBER=8
[2026-05-02 13:42:18] Set ATHENA_CORE_NUMBER=8
[2026-05-02 13:42:18] Starting ATLAS job with PandaID=7123293090
[2026-05-02 13:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 18:49:13]  *** The last 200 lines of the pilot log: ***
[2026-05-02 18:49:13] 2026-05-02 16:48:35,046 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 18:49:13] 2026-05-02 16:48:35,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 18:49:13] 2026-05-02 16:48:35,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 18:49:13] 2026-05-02 16:48:35,052 | INFO     | fitting pss+swap vs Time
[2026-05-02 18:49:13] 2026-05-02 16:48:35,053 | INFO     | sum of square deviations: 7562532492.5
[2026-05-02 18:49:13] 2026-05-02 16:48:35,056 | INFO     | sum of deviations: 205563624523.99997
[2026-05-02 18:49:13] 2026-05-02 16:48:35,056 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,056 | INFO     | mean y: 2416116.544827586
[2026-05-02 18:49:13] 2026-05-02 16:48:35,057 | INFO     | intersect: 2416116.544827586
[2026-05-02 18:49:13] 2026-05-02 16:48:35,057 | INFO     | chi2: 9.806558608815395
[2026-05-02 18:49:13] 2026-05-02 16:48:35,058 | INFO     | sum of square deviations: 7178069470.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,061 | INFO     | sum of deviations: 220876965337.99997
[2026-05-02 18:49:13] 2026-05-02 16:48:35,061 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,061 | INFO     | mean y: 2422082.3192982455
[2026-05-02 18:49:13] 2026-05-02 16:48:35,061 | INFO     | intersect: 2422082.3192982455
[2026-05-02 18:49:13] 2026-05-02 16:48:35,062 | INFO     | chi2: 9.09269487025733
[2026-05-02 18:49:13] 2026-05-02 16:48:35,062 | INFO     | current chi2=9.09269487025733 (change=7.27945212009801 %)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,062 | INFO     | right removable region: 284
[2026-05-02 18:49:13] 2026-05-02 16:48:35,063 | INFO     | sum of square deviations: 7178069470.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,066 | INFO     | sum of deviations: 100363527652.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,066 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,066 | INFO     | mean y: 2457841.814035088
[2026-05-02 18:49:13] 2026-05-02 16:48:35,066 | INFO     | intersect: 2457841.814035088
[2026-05-02 18:49:13] 2026-05-02 16:48:35,067 | INFO     | chi2: 4.301193571776948
[2026-05-02 18:49:13] 2026-05-02 16:48:35,067 | INFO     | current chi2=4.301193571776948 (change=56.139623048696386 %)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,067 | INFO     | sum of square deviations: 6806862510.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,070 | INFO     | sum of deviations: 17913271864.500004
[2026-05-02 18:49:13] 2026-05-02 16:48:35,070 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,070 | INFO     | mean y: 2491682.525
[2026-05-02 18:49:13] 2026-05-02 16:48:35,071 | INFO     | intersect: 2491682.525
[2026-05-02 18:49:13] 2026-05-02 16:48:35,071 | INFO     | chi2: 1.1831139461135851
[2026-05-02 18:49:13] 2026-05-02 16:48:35,071 | INFO     | current chi2=1.1831139461135851 (change=72.49335733511741 %)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,072 | INFO     | sum of square deviations: 6448679050.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,074 | INFO     | sum of deviations: -2725147488.999996
[2026-05-02 18:49:13] 2026-05-02 16:48:35,075 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,075 | INFO     | mean y: 2500393.7018181817
[2026-05-02 18:49:13] 2026-05-02 16:48:35,075 | INFO     | intersect: 2500393.7018181817
[2026-05-02 18:49:13] 2026-05-02 16:48:35,075 | INFO     | chi2: 0.8321570639559647
[2026-05-02 18:49:13] 2026-05-02 16:48:35,076 | INFO     | current chi2=0.8321570639559647 (change=29.663827673613337 %)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,076 | INFO     | sum of square deviations: 6103286527.5
[2026-05-02 18:49:13] 2026-05-02 16:48:35,079 | INFO     | sum of deviations: 988797220.5000038
[2026-05-02 18:49:13] 2026-05-02 16:48:35,079 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,079 | INFO     | mean y: 2498730.085185185
[2026-05-02 18:49:13] 2026-05-02 16:48:35,079 | INFO     | intersect: 2498730.085185185
[2026-05-02 18:49:13] 2026-05-02 16:48:35,080 | INFO     | chi2: 0.8082256037501778
[2026-05-02 18:49:13] 2026-05-02 16:48:35,080 | INFO     | current chi2=0.8082256037501778 (change=2.8758345320076777 %)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,080 | INFO     | left removable region: 20
[2026-05-02 18:49:13] 2026-05-02 16:48:35,080 | INFO     | sum of square deviations: 5705372090.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,083 | INFO     | sum of deviations: 18507988497.500004
[2026-05-02 18:49:13] 2026-05-02 16:48:35,083 | INFO     | mean x (centered): 0.0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,083 | INFO     | mean y: 2506630.518939394
[2026-05-02 18:49:13] 2026-05-02 16:48:35,083 | INFO     | intersect: 2506630.518939394
[2026-05-02 18:49:13] 2026-05-02 16:48:35,084 | INFO     | chi2: 0.004238360691321578
[2026-05-02 18:49:13] 2026-05-02 16:48:35,084 | INFO     | current memory leak: 3.24 B/s (using 264 data points, chi2=0.00)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,085 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,085 | INFO     | ..............................
[2026-05-02 18:49:13] 2026-05-02 16:48:35,085 | INFO     | . Timing measurements:
[2026-05-02 18:49:13] 2026-05-02 16:48:35,085 | INFO     | . get job = 0 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,085 | INFO     | . initial setup = 120 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,086 | INFO     | . payload setup = 181 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,086 | INFO     | . stage-in = 0 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,086 | INFO     | . payload execution = 17794 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,089 | INFO     | . stage-out = 1 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,089 | INFO     | . log creation = 0 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,089 | INFO     | ..............................
[2026-05-02 18:49:13] 2026-05-02 16:48:35,216 | INFO     | 
[2026-05-02 18:49:13] 2026-05-02 16:48:35,216 | INFO     | job summary report
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | --------------------------------------------------
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | PanDA job id: 7123293090
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | task id: 49645815
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | errors: (none)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | pilot state: finished 
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | transexitcode: 0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | exeerrorcode: 0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | exeerrordiag: 
[2026-05-02 18:49:13] 2026-05-02 16:48:35,217 | INFO     | exitcode: 0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | exitmsg: OK
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | cpuconsumptiontime: 70640 s
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | nevents: 400
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | neventsw: 0
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | pid: 20552
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | pgrp: 20552
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | corecount: 8
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | event service: False
[2026-05-02 18:49:13] 2026-05-02 16:48:35,218 | INFO     | sizes: {0: 2274749, 1: 2275434, 2: 2275835, 3: 2277263, 13: 2277291, 17979: 2309705, 17982: 2318703, 17984: 2318759, 17986: 2318953}
[2026-05-02 18:49:13] 2026-05-02 16:48:35,219 | INFO     | --------------------------------------------------
[2026-05-02 18:49:13] 2026-05-02 16:48:35,219 | INFO     | 
[2026-05-02 18:49:13] 2026-05-02 16:48:35,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 18:49:13] 2026-05-02 16:48:35,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 18:49:13] 2026-05-02 16:48:35,271 | INFO     | job 7123293090 has completed (purged errors)
[2026-05-02 18:49:13] 2026-05-02 16:48:35,271 | INFO     | overall cleanup function is called
[2026-05-02 18:49:13] 2026-05-02 16:48:36,275 | INFO     | --- collectZombieJob: --- 10, [20552]
[2026-05-02 18:49:13] 2026-05-02 16:48:36,275 | INFO     | zombie collector waiting for pid 20552
[2026-05-02 18:49:13] 2026-05-02 16:48:36,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 18:49:13] 2026-05-02 16:48:36,276 | INFO     | collected zombie processes
[2026-05-02 18:49:13] 2026-05-02 16:48:36,276 | INFO     | will attempt to kill all subprocesses of pid=20552
[2026-05-02 18:49:13] 2026-05-02 16:48:36,331 | INFO     | process IDs to be killed: [20552] (in reverse order)
[2026-05-02 18:49:13] 2026-05-02 16:48:36,383 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 18:49:13] 2026-05-02 16:48:36,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 18:49:13] 2026-05-02 16:48:36,385 | INFO     | did not find any defunct processes belonging to 20552
[2026-05-02 18:49:13] 2026-05-02 16:48:36,387 | INFO     | did not find any defunct processes belonging to 20552
[2026-05-02 18:49:13] 2026-05-02 16:48:36,387 | INFO     | Ready for new job
[2026-05-02 18:49:13] 2026-05-02 16:48:36,390 | INFO     | ***************************************
[2026-05-02 18:49:13] 2026-05-02 16:48:36,390 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 18:49:13] 2026-05-02 16:48:36,390 | INFO     | ***************************************
[2026-05-02 18:49:13] 2026-05-02 16:48:36,390 | INFO     | 
[2026-05-02 18:49:13] 2026-05-02 16:48:36,391 | INFO     | pilot is running in a VM
[2026-05-02 18:49:13] 2026-05-02 16:48:36,391 | INFO     | architecture information:
[2026-05-02 18:49:13] 2026-05-02 16:48:36,391 | INFO     | executing command: cat /etc/os-release
[2026-05-02 18:49:13] 2026-05-02 16:48:36,411 | INFO     | cat /etc/os-release:
[2026-05-02 18:49:13] NAME="CentOS Linux"
[2026-05-02 18:49:13] VERSION="7 (Core)"
[2026-05-02 18:49:13] ID="centos"
[2026-05-02 18:49:13] ID_LIKE="rhel fedora"
[2026-05-02 18:49:13] VERSION_ID="7"
[2026-05-02 18:49:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 18:49:13] ANSI_COLOR="0;31"
[2026-05-02 18:49:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 18:49:13] HOME_URL="https://www.centos.org/"
[2026-05-02 18:49:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 18:49:13] 
[2026-05-02 18:49:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 18:49:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 18:49:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 18:49:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 18:49:13] 
[2026-05-02 18:49:13] 2026-05-02 16:48:36,411 | INFO     | ***************************************
[2026-05-02 18:49:13] 2026-05-02 16:48:36,914 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 18:49:13] 2026-05-02 16:48:36,939 | INFO     | sufficient remaining disk space (497358471168 B)
[2026-05-02 18:49:13] 2026-05-02 16:48:36,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 18:49:13] 2026-05-02 16:48:36,939 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 18:49:13] 2026-05-02 16:48:36,939 | INFO     | update_server=False
[2026-05-02 18:49:13] 2026-05-02 16:48:36,940 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 18:49:13] 2026-05-02 16:48:36,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 18:49:13] 2026-05-02 16:48:36,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 18:49:13] 2026-05-02 16:48:36,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 18:49:13] 2026-05-02 16:48:36,941 | INFO     | aborting loop
[2026-05-02 18:49:13] 2026-05-02 16:48:37,246 | INFO     | all data control threads have been joined
[2026-05-02 18:49:13] 2026-05-02 16:48:37,673 | INFO     | all payload control threads have been joined
[2026-05-02 18:49:13] 2026-05-02 16:48:37,940 | INFO     | [job] retrieve thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:37,946 | INFO     | [job] queue monitor thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:37,947 | INFO     | [job] job monitor thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,167 | INFO     | [data] copytool_in thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,251 | INFO     | [data] control thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,378 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,501 | INFO     | [job] validate thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,593 | INFO     | all job control threads have been joined
[2026-05-02 18:49:13] 2026-05-02 16:48:38,676 | INFO     | [payload] control thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,696 | INFO     | [payload] failed_post thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:38,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 18:49:13] 2026-05-02 16:48:38,946 | INFO     | [data] copytool_out thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:39,038 | INFO     | [payload] validate_post thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:39,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:39,237 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:39,442 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:39,598 | INFO     | [job] control thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:48:42,910 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 18:49:13] 2026-05-02 16:49:06,645 | INFO     | [monitor] cgroup control has ended
[2026-05-02 18:49:13] 2026-05-02 16:49:06,822 | INFO     | PID=16079 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 18:49:13] 2026-05-02 16:49:06,822 | INFO     | .. there are 2 such processes running
[2026-05-02 18:49:13] 2026-05-02 16:49:06,824 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 18:49:13] 2026-05-02 16:49:06,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 18:49:13] 2026-05-02 16:49:06,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 18:49:13] 2026-05-02 16:49:07,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020047320896)>', '<ExcThread(monitor, started 140019465438976)>']
[2026-05-02 18:49:13] 2026-05-02 16:49:07,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 18:49:13] 2026-05-02 16:49:07,829 | INFO     | [monitor] control thread has ended
[2026-05-02 18:49:13] 2026-05-02 16:49:12,608 | INFO     | all workflow threads have been joined
[2026-05-02 18:49:13] 2026-05-02 16:49:12,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 18:49:13] 2026-05-02 16:49:12,609 | INFO     | traces error code: 0
[2026-05-02 18:49:13] 2026-05-02 16:49:12,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 18:49:13] 2026-05-02 16:49:12,766 [wrapper] ==== pilot stdout END ====
[2026-05-02 18:49:13] 2026-05-02 16:49:12,770 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 18:49:13] 2026-05-02 16:49:12,774 [wrapper] pilotpid: 16079
[2026-05-02 18:49:13] 2026-05-02 16:49:12,778 [wrapper] Pilot exit status: 0
[2026-05-02 18:49:13] 2026-05-02 16:49:12,801 [wrapper] pandaids: 7123293090
[2026-05-02 18:49:13] 2026-05-02 16:49:12,839 [wrapper] cleanup supervisor_pilot  6655 16080
[2026-05-02 18:49:13] 2026-05-02 16:49:12,846 [wrapper] Test setup, not cleaning
[2026-05-02 18:49:13] 2026-05-02 16:49:12,853 [wrapper] apfmon messages muted
[2026-05-02 18:49:13] 2026-05-02 16:49:12,857 [wrapper] ==== wrapper stdout END ====
[2026-05-02 18:49:13] 2026-05-02 16:49:12,860 [wrapper] ==== wrapper stderr END ====
[2026-05-02 18:49:13]  *** Error codes and diagnostics ***
[2026-05-02 18:49:13]     "exeErrorCode": 0,
[2026-05-02 18:49:13]     "pilotErrorCode": 0,
[2026-05-02 18:49:13]  *** Listing of results directory ***
[2026-05-02 18:49:13] total 417200
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc    683926 May  2 00:55 pilot3.tar.gz
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc      5631 May  2 00:56 queuedata.json
[2026-05-02 18:49:13] -rwx------. 1 boinc boinc     36322 May  2 00:58 runpilot2-wrapper.sh
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc       100 May  2 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 18:49:13] -rwxr-xr-x. 1 boinc boinc      7986 May  2 13:42 run_atlas
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc       105 May  2 13:42 job.xml
[2026-05-02 18:49:13] -rw-r--r--. 2 boinc boinc 221826555 May  2 13:42 EVNT.48629115._000600.pool.root.1
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc      6307 May  2 13:42 init_data.xml
[2026-05-02 18:49:13] -rw-r--r--. 2 boinc boinc     15667 May  2 13:42 start_atlas.sh
[2026-05-02 18:49:13] drwxrwx--x. 2 boinc boinc        68 May  2 13:42 shared
[2026-05-02 18:49:13] -rw-r--r--. 2 boinc boinc    697448 May  2 13:42 input.tar.gz
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc         0 May  2 13:42 boinc_lockfile
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc      2630 May  2 13:42 pandaJob.out
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc       415 May  2 13:48 workernode_map.json
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc   1002984 May  2 13:48 agis_schedconf.cvmfs.json
[2026-05-02 18:49:13] drwx------. 5 boinc boinc      4096 May  2 13:48 pilot3
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc 197020569 May  2 18:47 HITS.49645815._027286.pool.root.1
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc       489 May  2 18:48 boinc_task_state.xml
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc      1019 May  2 18:48 memory_monitor_summary.json
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc   1508687 May  2 18:48 agis_ddmendpoints.agis.ALL.json
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc    444643 May  2 18:48 log.49645815._027286.job.log.tgz.1
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc      6347 May  2 18:48 heartbeat_new.json
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc      6238 May  2 18:48 heartbeat.json
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc        95 May  2 18:49 pilot_heartbeat.json
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc      8192 May  2 18:49 boinc_mmap_file
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc      4883 May  2 18:49 pilotlog.txt
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc        28 May  2 18:49 wrapper_checkpoint.txt
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc   1678814 May  2 18:49 log.49645815._027286.job.log.1
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc       357 May  2 18:49 output.list
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc       410 May  2 18:49 runtime_log
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc   2140160 May  2 18:49 result.tar.gz
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc      8439 May  2 18:49 runtime_log.err
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc       655 May  2 18:49 301abec8fa77.diag
[2026-05-02 18:49:13] -rw-r--r--. 1 boinc boinc     20476 May  2 18:49 stderr.txt
[2026-05-02 18:49:13] HITS file was successfully produced:
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc 197020569 May  2 18:47 shared/HITS.pool.root.1
[2026-05-02 18:49:13]  *** Contents of shared directory: ***
[2026-05-02 18:49:13] total 411824
[2026-05-02 18:49:13] -rw-r--r--. 2 boinc boinc 221826555 May  2 13:42 ATLAS.root_0
[2026-05-02 18:49:13] -rw-r--r--. 2 boinc boinc     15667 May  2 13:42 start_atlas.sh
[2026-05-02 18:49:13] -rw-r--r--. 2 boinc boinc    697448 May  2 13:42 input.tar.gz
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc 197020569 May  2 18:47 HITS.pool.root.1
[2026-05-02 18:49:13] -rw-------. 1 boinc boinc   2140160 May  2 18:49 result.tar.gz
18:49:14 (12093): run_atlas exited; CPU time 70808.660891
18:49:14 (12093): called boinc_finish(0)

</stderr_txt>
]]>

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