Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:35 (1291229): wrapper (7.7.26015): starting
10:42:35 (1291229): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 10:42:35] Arguments: --nthreads 4
[2026-05-03 10:42:35] Threads: 4
[2026-05-03 10:42:35] Checking for CVMFS
[2026-05-03 10:42:35] No cvmfs_config command found, will try listing directly
[2026-05-03 10:42:35] CVMFS is ok
[2026-05-03 10:42:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 10:42:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 10:42:35] Further information can be found at the LHC@home message board.
[2026-05-03 10:42:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 10:42:35] Checking for apptainer binary...
[2026-05-03 10:42:35] which: no apptainer in ((null))
[2026-05-03 10:42:35] apptainer is not installed, using version from CVMFS
[2026-05-03 10:42:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 10:42:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-05-03 10:42:36] apptainer works
[2026-05-03 10:42:36] Set ATHENA_PROC_NUMBER=4
[2026-05-03 10:42:36] Set ATHENA_CORE_NUMBER=4
[2026-05-03 10:42:36] Starting ATLAS job with PandaID=7123293351
[2026-05-03 10:42:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 13:52:18]  *** The last 200 lines of the pilot log: ***
[2026-05-03 13:52:18] 2026-05-03 11:47:30,522 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,522 | INFO     | log transfer has been attempted: DONE
[2026-05-03 13:52:18] 2026-05-03 11:47:30,522 | INFO     | job 7123293351 has finished - writing final server update
[2026-05-03 13:52:18] 2026-05-03 11:47:30,522 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2927670/.job.ad'
[2026-05-03 13:52:18] 2026-05-03 11:47:30,522 | INFO     | total number of processed events: 400 (read)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,536 | INFO     | using path: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7123293351/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,537 | INFO     | extracted standard info from prmon json
[2026-05-03 13:52:18] 2026-05-03 11:47:30,537 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 13:52:18] 2026-05-03 11:47:30,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 13:52:18] 2026-05-03 11:47:30,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 13:52:18] 2026-05-03 11:47:30,541 | INFO     | fitting pss+swap vs Time
[2026-05-03 13:52:18] 2026-05-03 11:47:30,541 | INFO     | sum of square deviations: 1869302025.5
[2026-05-03 13:52:18] 2026-05-03 11:47:30,543 | INFO     | sum of deviations: -2571460124.000002
[2026-05-03 13:52:18] 2026-05-03 11:47:30,543 | INFO     | mean x (centered): 0.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,543 | INFO     | mean y: 2316665.1978021977
[2026-05-03 13:52:18] 2026-05-03 11:47:30,543 | INFO     | intersect: 2316665.1978021977
[2026-05-03 13:52:18] 2026-05-03 11:47:30,543 | INFO     | chi2: 2.1395395020863077
[2026-05-03 13:52:18] 2026-05-03 11:47:30,544 | INFO     | sum of square deviations: 1719429448.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,545 | INFO     | sum of deviations: 8528791615.999998
[2026-05-03 13:52:18] 2026-05-03 11:47:30,545 | INFO     | mean x (centered): 0.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,545 | INFO     | mean y: 2327707.824858757
[2026-05-03 13:52:18] 2026-05-03 11:47:30,546 | INFO     | intersect: 2327707.824858757
[2026-05-03 13:52:18] 2026-05-03 11:47:30,546 | INFO     | chi2: 1.3786351254727662
[2026-05-03 13:52:18] 2026-05-03 11:47:30,546 | INFO     | current chi2=1.3786351254727662 (change=35.56393213920885 %)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,546 | INFO     | sum of square deviations: 1577789583.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,547 | INFO     | sum of deviations: 8291021942.500004
[2026-05-03 13:52:18] 2026-05-03 11:47:30,548 | INFO     | mean x (centered): 0.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,548 | INFO     | mean y: 2327451.761627907
[2026-05-03 13:52:18] 2026-05-03 11:47:30,548 | INFO     | intersect: 2327451.761627907
[2026-05-03 13:52:18] 2026-05-03 11:47:30,548 | INFO     | chi2: 1.3795145599141823
[2026-05-03 13:52:18] 2026-05-03 11:47:30,548 | INFO     | current chi2=1.3795145599141823 (change=-0.06379022448847359 %)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,548 | INFO     | right removable region: 171
[2026-05-03 13:52:18] 2026-05-03 11:47:30,549 | INFO     | sum of square deviations: 1719429448.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,550 | INFO     | sum of deviations: -25035920486.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,550 | INFO     | mean x (centered): 0.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,550 | INFO     | mean y: 2339180.672316384
[2026-05-03 13:52:18] 2026-05-03 11:47:30,550 | INFO     | intersect: 2339180.672316384
[2026-05-03 13:52:18] 2026-05-03 11:47:30,550 | INFO     | chi2: 0.8291037795660231
[2026-05-03 13:52:18] 2026-05-03 11:47:30,550 | INFO     | current chi2=0.8291037795660231 (change=61.248493951266255 %)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,551 | INFO     | sum of square deviations: 1577789583.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,552 | INFO     | sum of deviations: -21498349285.5
[2026-05-03 13:52:18] 2026-05-03 11:47:30,552 | INFO     | mean x (centered): 0.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,552 | INFO     | mean y: 2335371.2034883723
[2026-05-03 13:52:18] 2026-05-03 11:47:30,552 | INFO     | intersect: 2335371.2034883723
[2026-05-03 13:52:18] 2026-05-03 11:47:30,553 | INFO     | chi2: 0.823821433209987
[2026-05-03 13:52:18] 2026-05-03 11:47:30,553 | INFO     | current chi2=0.823821433209987 (change=0.6371152184110191 %)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,553 | INFO     | left removable region: 10
[2026-05-03 13:52:18] 2026-05-03 11:47:30,553 | INFO     | sum of square deviations: 1294014960.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,554 | INFO     | sum of deviations: -10163723742.000002
[2026-05-03 13:52:18] 2026-05-03 11:47:30,554 | INFO     | mean x (centered): 0.0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,554 | INFO     | mean y: 2348049.5590062113
[2026-05-03 13:52:18] 2026-05-03 11:47:30,554 | INFO     | intersect: 2348049.5590062113
[2026-05-03 13:52:18] 2026-05-03 11:47:30,555 | INFO     | chi2: 0.03847269223257792
[2026-05-03 13:52:18] 2026-05-03 11:47:30,555 | INFO     | current memory leak: -7.85 B/s (using 161 data points, chi2=0.04)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,555 | INFO     | could have reported an average CPU frequency of 2557 MHz (10 samples)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | ..............................
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . Timing measurements:
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . get job = 0 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . initial setup = 6 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . payload setup = 11 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . stage-in = 0 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . payload execution = 11047 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . stage-out = 1 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | . log creation = 0 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,556 | INFO     | ..............................
[2026-05-03 13:52:18] 2026-05-03 11:47:30,986 | INFO     | 
[2026-05-03 13:52:18] 2026-05-03 11:47:30,986 | INFO     | job summary report
[2026-05-03 13:52:18] 2026-05-03 11:47:30,986 | INFO     | --------------------------------------------------
[2026-05-03 13:52:18] 2026-05-03 11:47:30,986 | INFO     | PanDA job id: 7123293351
[2026-05-03 13:52:18] 2026-05-03 11:47:30,986 | INFO     | task id: 49263200
[2026-05-03 13:52:18] 2026-05-03 11:47:30,986 | INFO     | errors: (none)
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | pilot state: finished 
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | transexitcode: 0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | exeerrorcode: 0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | exeerrordiag: 
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | exitcode: 0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | exitmsg: OK
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | cpuconsumptiontime: 42295 s
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | nevents: 400
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | neventsw: 0
[2026-05-03 13:52:18] 2026-05-03 11:47:30,987 | INFO     | pid: 1300196
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | pgrp: 1300196
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | corecount: 4
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | event service: False
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | sizes: {0: 2275369, 1: 2277198, 11: 2277198, 11062: 2306337, 11063: 2315413, 11066: 2315551}
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | --------------------------------------------------
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | 
[2026-05-03 13:52:18] 2026-05-03 11:47:30,988 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/5
[2026-05-03 13:52:18] 2026-05-03 11:47:31,010 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,010 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,010 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,010 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | job 7123293351 has completed (purged errors)
[2026-05-03 13:52:18] 2026-05-03 11:47:31,012 | INFO     | overall cleanup function is called
[2026-05-03 13:52:18] 2026-05-03 11:47:32,021 | INFO     | --- collectZombieJob: --- 10, [1300196]
[2026-05-03 13:52:18] 2026-05-03 11:47:32,021 | INFO     | zombie collector waiting for pid 1300196
[2026-05-03 13:52:18] 2026-05-03 11:47:32,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 13:52:18] 2026-05-03 11:47:32,021 | INFO     | collected zombie processes
[2026-05-03 13:52:18] 2026-05-03 11:47:32,021 | INFO     | will attempt to kill all subprocesses of pid=1300196
[2026-05-03 13:52:18] 2026-05-03 11:47:32,346 | INFO     | process IDs to be killed: [1300196] (in reverse order)
[2026-05-03 13:52:18] 2026-05-03 11:47:32,476 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 13:52:18] 2026-05-03 11:47:32,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 13:52:18] 2026-05-03 11:47:32,491 | INFO     | did not find any defunct processes belonging to 1300196
[2026-05-03 13:52:18] 2026-05-03 11:47:32,504 | INFO     | did not find any defunct processes belonging to 1300196
[2026-05-03 13:52:18] 2026-05-03 11:47:32,505 | INFO     | Ready for new job
[2026-05-03 13:52:18] 2026-05-03 11:47:32,507 | INFO     | ***************************************
[2026-05-03 13:52:18] 2026-05-03 11:47:32,507 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 13:52:18] 2026-05-03 11:47:32,507 | INFO     | ***************************************
[2026-05-03 13:52:18] 2026-05-03 11:47:32,507 | INFO     | 
[2026-05-03 13:52:18] 2026-05-03 11:47:32,511 | INFO     | architecture information:
[2026-05-03 13:52:18] 2026-05-03 11:47:32,512 | INFO     | executing command: cat /etc/os-release
[2026-05-03 13:52:18] 2026-05-03 11:47:32,529 | INFO     | cat /etc/os-release:
[2026-05-03 13:52:18] NAME="CentOS Linux"
[2026-05-03 13:52:18] VERSION="7 (Core)"
[2026-05-03 13:52:18] ID="centos"
[2026-05-03 13:52:18] ID_LIKE="rhel fedora"
[2026-05-03 13:52:18] VERSION_ID="7"
[2026-05-03 13:52:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 13:52:18] ANSI_COLOR="0;31"
[2026-05-03 13:52:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 13:52:18] HOME_URL="https://www.centos.org/"
[2026-05-03 13:52:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 13:52:18] 
[2026-05-03 13:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 13:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 13:52:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 13:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 13:52:18] 
[2026-05-03 13:52:18] 2026-05-03 11:47:32,530 | INFO     | ***************************************
[2026-05-03 13:52:18] 2026-05-03 11:47:33,032 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/5
[2026-05-03 13:52:18] 2026-05-03 11:47:33,049 | INFO     | sufficient remaining disk space (57606668288 B)
[2026-05-03 13:52:18] 2026-05-03 11:47:33,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 13:52:18] 2026-05-03 11:47:33,050 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 13:52:18] 2026-05-03 11:47:33,050 | INFO     | update_server=False
[2026-05-03 13:52:18] 2026-05-03 11:47:33,050 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 13:52:18] 2026-05-03 11:47:33,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 13:52:18] 2026-05-03 11:47:33,051 | INFO     | aborting loop
[2026-05-03 13:52:18] 2026-05-03 11:47:33,777 | INFO     | all data control threads have been joined
[2026-05-03 13:52:18] 2026-05-03 11:47:33,783 | INFO     | all job control threads have been joined
[2026-05-03 13:52:18] 2026-05-03 11:47:33,789 | INFO     | all payload control threads have been joined
[2026-05-03 13:52:18] 2026-05-03 11:47:33,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 13:52:18] 2026-05-03 11:47:34,054 | INFO     | [job] retrieve thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,055 | INFO     | [job] job monitor thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,232 | INFO     | [payload] failed_post thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,295 | INFO     | [data] copytool_in thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 13:52:18] 2026-05-03 11:47:34,520 | INFO     | [payload] validate_post thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,743 | INFO     | [job] validate thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,783 | INFO     | [data] control thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,788 | INFO     | [job] control thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:34,794 | INFO     | [payload] control thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:35,171 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:35,177 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:35,516 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:35,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 13:52:18] 2026-05-03 11:47:35,824 | INFO     | [data] copytool_out thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:36,674 | INFO     | [job] queue monitor thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:38,427 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:47:43,959 | INFO     | job.realtimelogging is not enabled
[2026-05-03 13:52:18] 2026-05-03 11:47:44,964 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 13:52:18] 2026-05-03 11:48:03,739 | INFO     | PID=1295332 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 13:52:18] 2026-05-03 11:48:03,739 | INFO     | .. there are 10 such processes running
[2026-05-03 13:52:18] 2026-05-03 11:48:03,740 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 13:52:18] 2026-05-03 11:48:03,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 13:52:18] 2026-05-03 11:48:03,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 13:52:18] 2026-05-03 11:48:11,726 | INFO     | [monitor] cgroup control has ended
[2026-05-03 13:52:18] 2026-05-03 11:48:13,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23348325652288)>', '<ExcThread(monitor, started 23348022363904)>']
[2026-05-03 13:52:18] 2026-05-03 11:48:13,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 13:52:18] 2026-05-03 11:48:13,780 | INFO     | [monitor] control thread has ended
[2026-05-03 13:52:18] 2026-05-03 11:48:18,065 | INFO     | all workflow threads have been joined
[2026-05-03 13:52:18] 2026-05-03 11:48:18,065 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 13:52:18] 2026-05-03 11:48:18,066 | INFO     | traces error code: 0
[2026-05-03 13:52:18] 2026-05-03 11:48:18,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 13:52:18] 2026-05-03 11:48:18,217 [wrapper] ==== pilot stdout END ====
[2026-05-03 13:52:18] 2026-05-03 11:48:18,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 13:52:18] 2026-05-03 11:48:18,223 [wrapper] pilotpid: 1295332
[2026-05-03 13:52:18] 2026-05-03 11:48:18,225 [wrapper] Pilot exit status: 0
[2026-05-03 13:52:18] 2026-05-03 11:48:18,236 [wrapper] pandaids: 7123293351
[2026-05-03 13:52:18] 2026-05-03 11:48:18,318 [wrapper] cleanup supervisor_pilot 1533184 1295333
[2026-05-03 13:52:18] 2026-05-03 11:48:18,321 [wrapper] Test setup, not cleaning
[2026-05-03 13:52:18] 2026-05-03 11:48:18,324 [wrapper] apfmon messages muted
[2026-05-03 13:52:18] 2026-05-03 11:48:18,327 [wrapper] ==== wrapper stdout END ====
[2026-05-03 13:52:18] 2026-05-03 11:48:18,330 [wrapper] ==== wrapper stderr END ====
[2026-05-03 13:52:18]  *** Error codes and diagnostics ***
[2026-05-03 13:52:18]     "exeErrorCode": 0,
[2026-05-03 13:52:18]     "pilotErrorCode": 0,
[2026-05-03 13:52:18]  *** Listing of results directory ***
[2026-05-03 13:52:18] total 419500
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc    683926 May  2 00:55 pilot3.tar.gz
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc      5631 May  2 00:56 queuedata.json
[2026-05-03 13:52:18] -rwx------. 1 boinc boinc     36322 May  2 00:58 runpilot2-wrapper.sh
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc       100 May  3 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 13:52:18] -rwxr-xr-x. 1 boinc boinc      7986 May  3 10:42 run_atlas
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc       105 May  3 10:42 job.xml
[2026-05-03 13:52:18] -rw-r--r--. 2 boinc boinc 225951795 May  3 10:42 EVNT.49263198._001778.pool.root.1
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc      6482 May  3 10:42 init_data.xml
[2026-05-03 13:52:18] -rw-r--r--. 2 boinc boinc     15667 May  3 10:42 start_atlas.sh
[2026-05-03 13:52:18] drwxrwx--x. 2 boinc boinc      4096 May  3 10:42 shared
[2026-05-03 13:52:18] -rw-r--r--. 2 boinc boinc    697425 May  3 10:42 input.tar.gz
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc         0 May  3 10:42 boinc_lockfile
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc      2577 May  3 10:42 pandaJob.out
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc   1003022 May  3 10:42 agis_schedconf.cvmfs.json
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc       452 May  3 10:42 workernode_map.json
[2026-05-03 13:52:18] drwx------. 5 boinc boinc      4096 May  3 10:42 pilot3
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc 196728937 May  3 13:46 HITS.49263200._085200.pool.root.1
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc       487 May  3 13:47 boinc_task_state.xml
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc      1048 May  3 13:47 memory_monitor_summary.json
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc   1508687 May  3 13:47 agis_ddmendpoints.agis.ALL.json
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc    320476 May  3 13:47 log.49263200._085200.job.log.tgz.1
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc      6429 May  3 13:47 heartbeat_new.json
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc      6320 May  3 13:47 heartbeat.json
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc        95 May  3 13:48 pilot_heartbeat.json
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc      4904 May  3 13:48 pilotlog.txt
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc   1050581 May  3 13:48 log.49263200._085200.job.log.1
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc       357 May  3 13:48 output.list
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc       410 May  3 13:48 runtime_log
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc   1392640 May  3 13:48 result.tar.gz
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc      8828 May  3 13:48 runtime_log.err
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc       665 May  3 13:48 2ffd53e2764d.diag
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc        27 May  3 13:51 wrapper_checkpoint.txt
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc      8192 May  3 13:52 boinc_mmap_file
[2026-05-03 13:52:18] -rw-r--r--. 1 boinc boinc     20813 May  3 13:52 stderr.txt
[2026-05-03 13:52:18] HITS file was successfully produced:
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc 196728937 May  3 13:46 shared/HITS.pool.root.1
[2026-05-03 13:52:18]  *** Contents of shared directory: ***
[2026-05-03 13:52:18] total 414848
[2026-05-03 13:52:18] -rw-r--r--. 2 boinc boinc 225951795 May  3 10:42 ATLAS.root_0
[2026-05-03 13:52:18] -rw-r--r--. 2 boinc boinc     15667 May  3 10:42 start_atlas.sh
[2026-05-03 13:52:18] -rw-r--r--. 2 boinc boinc    697425 May  3 10:42 input.tar.gz
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc 196728937 May  3 13:46 HITS.pool.root.1
[2026-05-03 13:52:18] -rw-------. 1 boinc boinc   1392640 May  3 13:48 result.tar.gz
13:52:20 (1291229): run_atlas exited; CPU time 42717.595890
13:52:20 (1291229): called boinc_finish(0)

</stderr_txt>
]]>

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