Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:41:50 (29509): wrapper (7.7.26015): starting
12:41:50 (29509): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 12:41:50] Arguments: --nthreads 8
[2026-05-02 12:41:50] Threads: 8
[2026-05-02 12:41:50] Checking for CVMFS
[2026-05-02 12:41:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 12:41:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 12:41:51] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 12:41:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 12:41:52] 2.11.2.0 14223 24082 101568 159128 1 93 24584228 25165825 1045 130560 0 8540071 99.788 6808044 7043 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 12:41:52] CVMFS is ok
[2026-05-02 12:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 12:41:52] Checking for apptainer binary...
[2026-05-02 12:41:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 12:41:52] Running /usr/bin/apptainer --version
[2026-05-02 12:41:53] apptainer version 1.3.2-1.el7
[2026-05-02 12:41:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 12:42:16] cg-vwn442.simple-grid.lan
[2026-05-02 12:42:16] apptainer works
[2026-05-02 12:42:16] Set ATHENA_PROC_NUMBER=8
[2026-05-02 12:42:16] Set ATHENA_CORE_NUMBER=8
[2026-05-02 12:42:16] Starting ATLAS job with PandaID=7123304057
[2026-05-02 12:42:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 17:23:07]  *** The last 200 lines of the pilot log: ***
[2026-05-02 17:23:07] 2026-05-02 15:22:21,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 17:23:07] 2026-05-02 15:22:21,507 | INFO     | fitting pss+swap vs Time
[2026-05-02 17:23:07] 2026-05-02 15:22:21,507 | INFO     | sum of square deviations: 5576683165.5
[2026-05-02 17:23:07] 2026-05-02 15:22:21,509 | INFO     | sum of deviations: 120960011884.49998
[2026-05-02 17:23:07] 2026-05-02 15:22:21,510 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,510 | INFO     | mean y: 2447119.0114503815
[2026-05-02 17:23:07] 2026-05-02 15:22:21,510 | INFO     | intersect: 2447119.0114503815
[2026-05-02 17:23:07] 2026-05-02 15:22:21,510 | INFO     | chi2: 7.123642963452674
[2026-05-02 17:23:07] 2026-05-02 15:22:21,511 | INFO     | sum of square deviations: 5263458688.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,513 | INFO     | sum of deviations: 118495722873.99998
[2026-05-02 17:23:07] 2026-05-02 15:22:21,513 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,513 | INFO     | mean y: 2445919.105058366
[2026-05-02 17:23:07] 2026-05-02 15:22:21,514 | INFO     | intersect: 2445919.105058366
[2026-05-02 17:23:07] 2026-05-02 15:22:21,514 | INFO     | chi2: 7.135084609144587
[2026-05-02 17:23:07] 2026-05-02 15:22:21,514 | INFO     | current chi2=7.135084609144587 (change=-0.16061509189347895 %)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,514 | INFO     | right removable region: 256
[2026-05-02 17:23:07] 2026-05-02 15:22:21,515 | INFO     | sum of square deviations: 5263458688.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,517 | INFO     | sum of deviations: 31053553101.000004
[2026-05-02 17:23:07] 2026-05-02 15:22:21,517 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,517 | INFO     | mean y: 2490860.821011673
[2026-05-02 17:23:07] 2026-05-02 15:22:21,518 | INFO     | intersect: 2490860.821011673
[2026-05-02 17:23:07] 2026-05-02 15:22:21,518 | INFO     | chi2: 2.3055375695839353
[2026-05-02 17:23:07] 2026-05-02 15:22:21,518 | INFO     | current chi2=2.3055375695839353 (change=67.63541377056198 %)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,519 | INFO     | sum of square deviations: 4962187923.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,521 | INFO     | sum of deviations: -26708346902.5
[2026-05-02 17:23:07] 2026-05-02 15:22:21,521 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,521 | INFO     | mean y: 2520000.837301587
[2026-05-02 17:23:07] 2026-05-02 15:22:21,521 | INFO     | intersect: 2520000.837301587
[2026-05-02 17:23:07] 2026-05-02 15:22:21,522 | INFO     | chi2: 0.23437695690148236
[2026-05-02 17:23:07] 2026-05-02 15:22:21,522 | INFO     | current chi2=0.23437695690148236 (change=89.83417316666072 %)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,522 | INFO     | sum of square deviations: 4672638308.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,524 | INFO     | sum of deviations: -34544186418.00001
[2026-05-02 17:23:07] 2026-05-02 15:22:21,524 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,524 | INFO     | mean y: 2524101.927125506
[2026-05-02 17:23:07] 2026-05-02 15:22:21,524 | INFO     | intersect: 2524101.927125506
[2026-05-02 17:23:07] 2026-05-02 15:22:21,525 | INFO     | chi2: 0.17099896311949722
[2026-05-02 17:23:07] 2026-05-02 15:22:21,525 | INFO     | current chi2=0.17099896311949722 (change=27.04105156917168 %)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,525 | INFO     | sum of square deviations: 4394577280.5
[2026-05-02 17:23:07] 2026-05-02 15:22:21,527 | INFO     | sum of deviations: -27634401993.500004
[2026-05-02 17:23:07] 2026-05-02 15:22:21,527 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,527 | INFO     | mean y: 2520308.4834710746
[2026-05-02 17:23:07] 2026-05-02 15:22:21,528 | INFO     | intersect: 2520308.4834710746
[2026-05-02 17:23:07] 2026-05-02 15:22:21,528 | INFO     | chi2: 0.1580508251587856
[2026-05-02 17:23:07] 2026-05-02 15:22:21,528 | INFO     | current chi2=0.1580508251587856 (change=7.572056417478522 %)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,528 | INFO     | left removable region: 20
[2026-05-02 17:23:07] 2026-05-02 15:22:21,529 | INFO     | sum of square deviations: 4075741535.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,530 | INFO     | sum of deviations: -27063794756.500008
[2026-05-02 17:23:07] 2026-05-02 15:22:21,531 | INFO     | mean x (centered): 0.0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,531 | INFO     | mean y: 2520636.8262711866
[2026-05-02 17:23:07] 2026-05-02 15:22:21,531 | INFO     | intersect: 2520636.8262711866
[2026-05-02 17:23:07] 2026-05-02 15:22:21,531 | INFO     | chi2: 0.15684018466422686
[2026-05-02 17:23:07] 2026-05-02 15:22:21,531 | INFO     | current memory leak: -6.64 B/s (using 236 data points, chi2=0.16)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,532 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,532 | INFO     | ..............................
[2026-05-02 17:23:07] 2026-05-02 15:22:21,532 | INFO     | . Timing measurements:
[2026-05-02 17:23:07] 2026-05-02 15:22:21,532 | INFO     | . get job = 0 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | . initial setup = 118 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | . payload setup = 301 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | . stage-in = 0 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | . payload execution = 16102 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | . stage-out = 1 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | . log creation = 0 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,533 | INFO     | ..............................
[2026-05-02 17:23:07] 2026-05-02 15:22:21,639 | INFO     | 
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | job summary report
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | --------------------------------------------------
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | PanDA job id: 7123304057
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | task id: 49645815
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | errors: (none)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 17:23:07] 2026-05-02 15:22:21,640 | INFO     | pilot state: finished 
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | transexitcode: 0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | exeerrorcode: 0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | exeerrordiag: 
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | exitcode: 0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | exitmsg: OK
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | cpuconsumptiontime: 68367 s
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | nevents: 400
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | neventsw: 0
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | pid: 5914
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | pgrp: 5914
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | corecount: 8
[2026-05-02 17:23:07] 2026-05-02 15:22:21,641 | INFO     | event service: False
[2026-05-02 17:23:07] 2026-05-02 15:22:21,642 | INFO     | sizes: {0: 2274749, 1: 2275661, 2: 2277263, 13: 2277263, 16407: 2308844, 16409: 2317842, 16413: 2318026, 16416: 2318220}
[2026-05-02 17:23:07] 2026-05-02 15:22:21,642 | INFO     | --------------------------------------------------
[2026-05-02 17:23:07] 2026-05-02 15:22:21,642 | INFO     | 
[2026-05-02 17:23:07] 2026-05-02 15:22:21,642 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 17:23:07] 2026-05-02 15:22:21,664 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 17:23:07] 2026-05-02 15:22:21,666 | INFO     | job 7123304057 has completed (purged errors)
[2026-05-02 17:23:07] 2026-05-02 15:22:21,667 | INFO     | overall cleanup function is called
[2026-05-02 17:23:07] 2026-05-02 15:22:22,675 | INFO     | --- collectZombieJob: --- 10, [5914]
[2026-05-02 17:23:07] 2026-05-02 15:22:22,675 | INFO     | zombie collector waiting for pid 5914
[2026-05-02 17:23:07] 2026-05-02 15:22:22,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 17:23:07] 2026-05-02 15:22:22,675 | INFO     | collected zombie processes
[2026-05-02 17:23:07] 2026-05-02 15:22:22,675 | INFO     | will attempt to kill all subprocesses of pid=5914
[2026-05-02 17:23:07] 2026-05-02 15:22:22,734 | INFO     | process IDs to be killed: [5914] (in reverse order)
[2026-05-02 17:23:07] 2026-05-02 15:22:22,789 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 17:23:07] 2026-05-02 15:22:22,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 17:23:07] 2026-05-02 15:22:22,791 | INFO     | did not find any defunct processes belonging to 5914
[2026-05-02 17:23:07] 2026-05-02 15:22:22,793 | INFO     | did not find any defunct processes belonging to 5914
[2026-05-02 17:23:07] 2026-05-02 15:22:22,793 | INFO     | Ready for new job
[2026-05-02 17:23:07] 2026-05-02 15:22:22,795 | INFO     | ***************************************
[2026-05-02 17:23:07] 2026-05-02 15:22:22,796 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 17:23:07] 2026-05-02 15:22:22,796 | INFO     | ***************************************
[2026-05-02 17:23:07] 2026-05-02 15:22:22,796 | INFO     | 
[2026-05-02 17:23:07] 2026-05-02 15:22:22,796 | INFO     | pilot is running in a VM
[2026-05-02 17:23:07] 2026-05-02 15:22:22,797 | INFO     | architecture information:
[2026-05-02 17:23:07] 2026-05-02 15:22:22,797 | INFO     | executing command: cat /etc/os-release
[2026-05-02 17:23:07] 2026-05-02 15:22:22,823 | INFO     | cat /etc/os-release:
[2026-05-02 17:23:07] NAME="CentOS Linux"
[2026-05-02 17:23:07] VERSION="7 (Core)"
[2026-05-02 17:23:07] ID="centos"
[2026-05-02 17:23:07] ID_LIKE="rhel fedora"
[2026-05-02 17:23:07] VERSION_ID="7"
[2026-05-02 17:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 17:23:07] ANSI_COLOR="0;31"
[2026-05-02 17:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 17:23:07] HOME_URL="https://www.centos.org/"
[2026-05-02 17:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 17:23:07] 
[2026-05-02 17:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 17:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 17:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 17:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 17:23:07] 
[2026-05-02 17:23:07] 2026-05-02 15:22:22,823 | INFO     | ***************************************
[2026-05-02 17:23:07] 2026-05-02 15:22:23,326 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 17:23:07] 2026-05-02 15:22:23,342 | INFO     | sufficient remaining disk space (497943576576 B)
[2026-05-02 17:23:07] 2026-05-02 15:22:23,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 17:23:07] 2026-05-02 15:22:23,343 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 17:23:07] 2026-05-02 15:22:23,343 | INFO     | update_server=False
[2026-05-02 17:23:07] 2026-05-02 15:22:23,343 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 17:23:07] 2026-05-02 15:22:23,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 17:23:07] 2026-05-02 15:22:23,344 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-02 17:23:07] 2026-05-02 15:22:23,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 17:23:07] 2026-05-02 15:22:23,345 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 17:23:07] 2026-05-02 15:22:23,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 17:23:07] 2026-05-02 15:22:23,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 17:23:07] 2026-05-02 15:22:23,656 | INFO     | all payload control threads have been joined
[2026-05-02 17:23:07] 2026-05-02 15:22:23,784 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 17:23:07] 2026-05-02 15:22:23,785 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 17:23:07] 2026-05-02 15:22:23,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 17:23:07] 2026-05-02 15:22:23,785 | INFO     | will abort loop
[2026-05-02 17:23:07] 2026-05-02 15:22:24,244 | INFO     | all data control threads have been joined
[2026-05-02 17:23:07] 2026-05-02 15:22:24,261 | INFO     | all job control threads have been joined
[2026-05-02 17:23:07] 2026-05-02 15:22:24,349 | INFO     | [job] retrieve thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,351 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,351 | INFO     | [job] queue monitor thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,536 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,662 | INFO     | [payload] control thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,663 | INFO     | [job] validate thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 17:23:07] 2026-05-02 15:22:24,790 | INFO     | [job] job monitor thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:24,999 | INFO     | [data] copytool_in thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:25,224 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:25,250 | INFO     | [data] control thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:25,266 | INFO     | [job] control thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:25,350 | INFO     | [data] copytool_out thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:25,527 | INFO     | [payload] failed_post thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:25,644 | INFO     | [payload] validate_post thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:28,726 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:22:33,670 | INFO     | job.realtimelogging is not enabled
[2026-05-02 17:23:07] 2026-05-02 15:22:34,676 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 17:23:07] 2026-05-02 15:23:00,076 | INFO     | [monitor] cgroup control has ended
[2026-05-02 17:23:07] 2026-05-02 15:23:02,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525637601088)>', '<ExcThread(monitor, started 140524593858304)>']
[2026-05-02 17:23:07] 2026-05-02 15:23:02,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 17:23:07] 2026-05-02 15:23:02,543 | INFO     | [monitor] control thread has ended
[2026-05-02 17:23:07] 2026-05-02 15:23:07,045 | INFO     | all workflow threads have been joined
[2026-05-02 17:23:07] 2026-05-02 15:23:07,045 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 17:23:07] 2026-05-02 15:23:07,046 | INFO     | traces error code: 0
[2026-05-02 17:23:07] 2026-05-02 15:23:07,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 17:23:07] 2026-05-02 15:23:07,190 [wrapper] ==== pilot stdout END ====
[2026-05-02 17:23:07] 2026-05-02 15:23:07,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 17:23:07] 2026-05-02 15:23:07,198 [wrapper] pilotpid: 1121
[2026-05-02 17:23:07] 2026-05-02 15:23:07,202 [wrapper] Pilot exit status: 0
[2026-05-02 17:23:07] 2026-05-02 15:23:07,220 [wrapper] pandaids: 7123304057
[2026-05-02 17:23:07] 2026-05-02 15:23:07,256 [wrapper] cleanup supervisor_pilot 22573 1122
[2026-05-02 17:23:07] 2026-05-02 15:23:07,260 [wrapper] Test setup, not cleaning
[2026-05-02 17:23:07] 2026-05-02 15:23:07,271 [wrapper] apfmon messages muted
[2026-05-02 17:23:07] 2026-05-02 15:23:07,275 [wrapper] ==== wrapper stdout END ====
[2026-05-02 17:23:07] 2026-05-02 15:23:07,279 [wrapper] ==== wrapper stderr END ====
[2026-05-02 17:23:07]  *** Error codes and diagnostics ***
[2026-05-02 17:23:07]     "exeErrorCode": 0,
[2026-05-02 17:23:07]     "pilotErrorCode": 0,
[2026-05-02 17:23:07]  *** Listing of results directory ***
[2026-05-02 17:23:07] total 413444
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc    683926 May  2 00:55 pilot3.tar.gz
[2026-05-02 17:23:07] -rwx------. 1 boinc boinc     36322 May  2 00:56 runpilot2-wrapper.sh
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc      5631 May  2 00:56 queuedata.json
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc       100 May  2 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 17:23:07] -rwxr-xr-x. 1 boinc boinc      7986 May  2 12:41 run_atlas
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc       105 May  2 12:41 job.xml
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc      6308 May  2 12:41 init_data.xml
[2026-05-02 17:23:07] -rw-r--r--. 2 boinc boinc 222580704 May  2 12:41 EVNT.48629115._000609.pool.root.1
[2026-05-02 17:23:07] -rw-r--r--. 2 boinc boinc     15667 May  2 12:41 start_atlas.sh
[2026-05-02 17:23:07] drwxrwx--x. 2 boinc boinc        68 May  2 12:41 shared
[2026-05-02 17:23:07] -rw-r--r--. 2 boinc boinc    697445 May  2 12:41 input.tar.gz
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc         0 May  2 12:41 boinc_lockfile
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc      2630 May  2 12:42 pandaJob.out
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc       415 May  2 12:48 workernode_map.json
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc   1002992 May  2 12:48 agis_schedconf.cvmfs.json
[2026-05-02 17:23:07] drwx------. 5 boinc boinc      4096 May  2 12:48 pilot3
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc 192777101 May  2 17:21 HITS.49645815._027664.pool.root.1
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc       488 May  2 17:21 boinc_task_state.xml
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc        95 May  2 17:21 pilot_heartbeat.json
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc      1019 May  2 17:22 memory_monitor_summary.json
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc   1508687 May  2 17:22 agis_ddmendpoints.agis.ALL.json
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc    422011 May  2 17:22 log.49645815._027664.job.log.tgz.1
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc      6345 May  2 17:22 heartbeat_new.json
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc      6236 May  2 17:22 heartbeat.json
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc      8192 May  2 17:23 boinc_mmap_file
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc        28 May  2 17:23 wrapper_checkpoint.txt
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc      4872 May  2 17:23 pilotlog.txt
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc   1522542 May  2 17:23 log.49645815._027664.job.log.1
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc       357 May  2 17:23 output.list
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc       410 May  2 17:23 runtime_log
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc   1966080 May  2 17:23 result.tar.gz
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc      8439 May  2 17:23 runtime_log.err
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc       655 May  2 17:23 2f815d02dae0.diag
[2026-05-02 17:23:07] -rw-r--r--. 1 boinc boinc     20422 May  2 17:23 stderr.txt
[2026-05-02 17:23:07] HITS file was successfully produced:
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc 192777101 May  2 17:21 shared/HITS.pool.root.1
[2026-05-02 17:23:07]  *** Contents of shared directory: ***
[2026-05-02 17:23:07] total 408244
[2026-05-02 17:23:07] -rw-r--r--. 2 boinc boinc 222580704 May  2 12:41 ATLAS.root_0
[2026-05-02 17:23:07] -rw-r--r--. 2 boinc boinc     15667 May  2 12:41 start_atlas.sh
[2026-05-02 17:23:07] -rw-r--r--. 2 boinc boinc    697445 May  2 12:41 input.tar.gz
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc 192777101 May  2 17:21 HITS.pool.root.1
[2026-05-02 17:23:07] -rw-------. 1 boinc boinc   1966080 May  2 17:23 result.tar.gz
17:23:08 (29509): run_atlas exited; CPU time 68525.159274
17:23:08 (29509): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN