Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:34 (13441): wrapper (7.7.26015): starting
10:42:34 (13441): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 10:42:34] Arguments: --nthreads 8
[2026-05-02 10:42:34] Threads: 8
[2026-05-02 10:42:34] Checking for CVMFS
[2026-05-02 10:42:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 10:42:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 10:42:34] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 10:42:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 10:42:35] 2.11.2.0 24747 23993 106384 159124 3 326 19662095 25165825 345 130560 0 10917197 99.817 8003217 7373 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 10:42:35] CVMFS is ok
[2026-05-02 10:42:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 10:42:35] Checking for apptainer binary...
[2026-05-02 10:42:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 10:42:35] Running /usr/bin/apptainer --version
[2026-05-02 10:42:35] apptainer version 1.3.2-1.el7
[2026-05-02 10:42:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 10:42:36] cg-vwn480.simple-grid.lan
[2026-05-02 10:42:36] apptainer works
[2026-05-02 10:42:36] Set ATHENA_PROC_NUMBER=8
[2026-05-02 10:42:36] Set ATHENA_CORE_NUMBER=8
[2026-05-02 10:42:36] Starting ATLAS job with PandaID=7123304669
[2026-05-02 10:42:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 12:42:24]  *** The last 200 lines of the pilot log: ***
[2026-05-02 12:42:24] 2026-05-02 10:41:15,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,344 | INFO     | log transfer has been attempted: DONE
[2026-05-02 12:42:24] 2026-05-02 10:41:15,344 | INFO     | job 7123304669 has finished - writing final server update
[2026-05-02 12:42:24] 2026-05-02 10:41:15,344 | INFO     | total number of processed events: 400 (read)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,346 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7123304669/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,347 | INFO     | extracted standard info from prmon json
[2026-05-02 12:42:24] 2026-05-02 10:41:15,347 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 12:42:24] 2026-05-02 10:41:15,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 12:42:24] 2026-05-02 10:41:15,348 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 12:42:24] 2026-05-02 10:41:15,350 | INFO     | fitting pss+swap vs Time
[2026-05-02 12:42:24] 2026-05-02 10:41:15,351 | INFO     | sum of square deviations: 483971865.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,351 | INFO     | sum of deviations: -6935029732.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,351 | INFO     | mean x (centered): 0.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,352 | INFO     | mean y: 2510173.8103448274
[2026-05-02 12:42:24] 2026-05-02 10:41:15,352 | INFO     | intersect: 2510173.8103448274
[2026-05-02 12:42:24] 2026-05-02 10:41:15,352 | INFO     | chi2: 2.433166446117751
[2026-05-02 12:42:24] 2026-05-02 10:41:15,352 | INFO     | sum of square deviations: 424045160.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,353 | INFO     | sum of deviations: 1111234255.0000038
[2026-05-02 12:42:24] 2026-05-02 10:41:15,353 | INFO     | mean x (centered): 0.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,353 | INFO     | mean y: 2529974.6936936937
[2026-05-02 12:42:24] 2026-05-02 10:41:15,353 | INFO     | intersect: 2529974.6936936937
[2026-05-02 12:42:24] 2026-05-02 10:41:15,353 | INFO     | chi2: 1.6777839344175949
[2026-05-02 12:42:24] 2026-05-02 10:41:15,354 | INFO     | current chi2=1.6777839344175949 (change=31.045246119738746 %)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,354 | INFO     | sum of square deviations: 369281342.5
[2026-05-02 12:42:24] 2026-05-02 10:41:15,354 | INFO     | sum of deviations: 1409270312.0000005
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | mean x (centered): 0.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | mean y: 2530805.2075471696
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | intersect: 2530805.2075471696
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | chi2: 1.6801869090762591
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | current chi2=1.6801869090762591 (change=-0.14322312959197425 %)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | right removable region: 105
[2026-05-02 12:42:24] 2026-05-02 10:41:15,355 | INFO     | sum of square deviations: 424045160.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | sum of deviations: -24592455854.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | mean x (centered): 0.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | mean y: 2554218.189189189
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | intersect: 2554218.189189189
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | chi2: 0.9205391348418864
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | current chi2=0.9205391348418864 (change=62.16702986716521 %)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,356 | INFO     | sum of square deviations: 369281342.5
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | sum of deviations: -23170612222.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | mean x (centered): 0.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | mean y: 2550123.3396226414
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | intersect: 2550123.3396226414
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | chi2: 0.9081960263122618
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | current chi2=0.9081960263122618 (change=1.3408564679593649 %)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | left removable region: 10
[2026-05-02 12:42:24] 2026-05-02 10:41:15,357 | INFO     | sum of square deviations: 265828240.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,358 | INFO     | sum of deviations: -14011910571.999998
[2026-05-02 12:42:24] 2026-05-02 10:41:15,358 | INFO     | mean x (centered): 0.0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,358 | INFO     | mean y: 2577747.7578947367
[2026-05-02 12:42:24] 2026-05-02 10:41:15,358 | INFO     | intersect: 2577747.7578947367
[2026-05-02 12:42:24] 2026-05-02 10:41:15,358 | INFO     | chi2: 0.09867857554114165
[2026-05-02 12:42:24] 2026-05-02 10:41:15,358 | INFO     | current memory leak: -52.71 B/s (using 95 data points, chi2=0.10)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | could have reported an average CPU frequency of 2249 MHz (7 samples)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | ..............................
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . Timing measurements:
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . get job = 0 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . initial setup = 8 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . payload setup = 18 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . stage-in = 0 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . payload execution = 7049 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . stage-out = 3 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | . log creation = 1 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,359 | INFO     | ..............................
[2026-05-02 12:42:24] 2026-05-02 10:41:15,484 | INFO     | 
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | job summary report
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | --------------------------------------------------
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | PanDA job id: 7123304669
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | task id: 49263200
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | errors: (none)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | pilot state: finished 
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | transexitcode: 0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | exeerrorcode: 0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,485 | INFO     | exeerrordiag: 
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | exitcode: 0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | exitmsg: OK
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | cpuconsumptiontime: 50482 s
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | nevents: 400
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | neventsw: 0
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | pid: 21571
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | pgrp: 21571
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | corecount: 8
[2026-05-02 12:42:24] 2026-05-02 10:41:15,486 | INFO     | event service: False
[2026-05-02 12:42:24] 2026-05-02 10:41:15,487 | INFO     | sizes: {0: 2275306, 1: 2277135, 12: 2277135, 7071: 2304472, 7075: 2313472, 7078: 2313528, 7081: 2313850}
[2026-05-02 12:42:24] 2026-05-02 10:41:15,487 | INFO     | --------------------------------------------------
[2026-05-02 12:42:24] 2026-05-02 10:41:15,487 | INFO     | 
[2026-05-02 12:42:24] 2026-05-02 10:41:15,487 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-05-02 12:42:24] 2026-05-02 10:41:15,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,867 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,867 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 12:42:24] 2026-05-02 10:41:15,867 | INFO     | job 7123304669 has completed (purged errors)
[2026-05-02 12:42:24] 2026-05-02 10:41:15,867 | INFO     | overall cleanup function is called
[2026-05-02 12:42:24] 2026-05-02 10:41:16,876 | INFO     | --- collectZombieJob: --- 10, [21571]
[2026-05-02 12:42:24] 2026-05-02 10:41:16,876 | INFO     | zombie collector waiting for pid 21571
[2026-05-02 12:42:24] 2026-05-02 10:41:16,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 12:42:24] 2026-05-02 10:41:16,876 | INFO     | collected zombie processes
[2026-05-02 12:42:24] 2026-05-02 10:41:16,876 | INFO     | will attempt to kill all subprocesses of pid=21571
[2026-05-02 12:42:24] 2026-05-02 10:41:16,936 | INFO     | process IDs to be killed: [21571] (in reverse order)
[2026-05-02 12:42:24] 2026-05-02 10:41:18,023 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 12:42:24] 2026-05-02 10:41:18,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 12:42:24] 2026-05-02 10:41:18,025 | INFO     | did not find any defunct processes belonging to 21571
[2026-05-02 12:42:24] 2026-05-02 10:41:18,027 | INFO     | did not find any defunct processes belonging to 21571
[2026-05-02 12:42:24] 2026-05-02 10:41:18,027 | INFO     | Ready for new job
[2026-05-02 12:42:24] 2026-05-02 10:41:18,029 | INFO     | ***************************************
[2026-05-02 12:42:24] 2026-05-02 10:41:18,029 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 12:42:24] 2026-05-02 10:41:18,029 | INFO     | ***************************************
[2026-05-02 12:42:24] 2026-05-02 10:41:18,029 | INFO     | 
[2026-05-02 12:42:24] 2026-05-02 10:41:18,030 | INFO     | pilot is running in a VM
[2026-05-02 12:42:24] 2026-05-02 10:41:18,030 | INFO     | architecture information:
[2026-05-02 12:42:24] 2026-05-02 10:41:18,037 | INFO     | executing command: cat /etc/os-release
[2026-05-02 12:42:24] 2026-05-02 10:41:18,286 | INFO     | cat /etc/os-release:
[2026-05-02 12:42:24] NAME="CentOS Linux"
[2026-05-02 12:42:24] VERSION="7 (Core)"
[2026-05-02 12:42:24] ID="centos"
[2026-05-02 12:42:24] ID_LIKE="rhel fedora"
[2026-05-02 12:42:24] VERSION_ID="7"
[2026-05-02 12:42:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 12:42:24] ANSI_COLOR="0;31"
[2026-05-02 12:42:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 12:42:24] HOME_URL="https://www.centos.org/"
[2026-05-02 12:42:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 12:42:24] 
[2026-05-02 12:42:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 12:42:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 12:42:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 12:42:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 12:42:24] 
[2026-05-02 12:42:24] 2026-05-02 10:41:18,286 | INFO     | ***************************************
[2026-05-02 12:42:24] 2026-05-02 10:41:18,790 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-05-02 12:42:24] 2026-05-02 10:41:19,070 | INFO     | sufficient remaining disk space (497609080832 B)
[2026-05-02 12:42:24] 2026-05-02 10:41:19,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 12:42:24] 2026-05-02 10:41:19,071 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 12:42:24] 2026-05-02 10:41:19,071 | INFO     | update_server=False
[2026-05-02 12:42:24] 2026-05-02 10:41:19,071 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 12:42:24] 2026-05-02 10:41:19,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 12:42:24] 2026-05-02 10:41:19,654 | INFO     | all data control threads have been joined
[2026-05-02 12:42:24] 2026-05-02 10:41:19,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 12:42:24] 2026-05-02 10:41:19,813 | INFO     | aborting loop
[2026-05-02 12:42:24] 2026-05-02 10:41:19,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 12:42:24] 2026-05-02 10:41:20,077 | INFO     | [job] retrieve thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,114 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,242 | INFO     | all payload control threads have been joined
[2026-05-02 12:42:24] 2026-05-02 10:41:20,320 | INFO     | all job control threads have been joined
[2026-05-02 12:42:24] 2026-05-02 10:41:20,470 | INFO     | [payload] failed_post thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 12:42:24] 2026-05-02 10:41:20,551 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,655 | INFO     | [job] validate thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,660 | INFO     | [data] control thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,819 | INFO     | [job] job monitor thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:20,911 | INFO     | [data] copytool_in thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:21,087 | INFO     | [payload] validate_post thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:21,249 | INFO     | [payload] control thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:21,277 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:21,327 | INFO     | [job] control thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:21,505 | INFO     | [job] queue monitor thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:21,831 | INFO     | [data] copytool_out thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:23,083 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:29,896 | INFO     | job.realtimelogging is not enabled
[2026-05-02 12:42:24] 2026-05-02 10:41:30,903 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 12:42:24] 2026-05-02 10:41:47,083 | INFO     | PID=17157 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 12:42:24] 2026-05-02 10:41:47,083 | INFO     | .. there are 2 such processes running
[2026-05-02 12:42:24] 2026-05-02 10:41:47,090 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 12:42:24] 2026-05-02 10:41:47,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 12:42:24] 2026-05-02 10:41:47,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 12:42:24] 2026-05-02 10:42:13,790 | INFO     | [monitor] cgroup control has ended
[2026-05-02 12:42:24] 2026-05-02 10:42:14,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716360398656)>', '<ExcThread(monitor, started 140715409536768)>']
[2026-05-02 12:42:24] 2026-05-02 10:42:15,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 12:42:24] 2026-05-02 10:42:15,258 | INFO     | [monitor] control thread has ended
[2026-05-02 12:42:24] 2026-05-02 10:42:19,515 | INFO     | all workflow threads have been joined
[2026-05-02 12:42:24] 2026-05-02 10:42:19,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 12:42:24] 2026-05-02 10:42:19,516 | INFO     | traces error code: 0
[2026-05-02 12:42:24] 2026-05-02 10:42:19,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 12:42:24] 2026-05-02 10:42:19,853 [wrapper] ==== pilot stdout END ====
[2026-05-02 12:42:24] 2026-05-02 10:42:19,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 12:42:24] 2026-05-02 10:42:20,076 [wrapper] pilotpid: 17157
[2026-05-02 12:42:24] 2026-05-02 10:42:20,189 [wrapper] Pilot exit status: 0
[2026-05-02 12:42:24] 2026-05-02 10:42:20,698 [wrapper] pandaids: 7123304669
[2026-05-02 12:42:24] 2026-05-02 10:42:21,708 [wrapper] cleanup supervisor_pilot 32378 17158
[2026-05-02 12:42:24] 2026-05-02 10:42:21,815 [wrapper] Test setup, not cleaning
[2026-05-02 12:42:24] 2026-05-02 10:42:21,920 [wrapper] apfmon messages muted
[2026-05-02 12:42:24] 2026-05-02 10:42:22,006 [wrapper] ==== wrapper stdout END ====
[2026-05-02 12:42:24] 2026-05-02 10:42:22,126 [wrapper] ==== wrapper stderr END ====
[2026-05-02 12:42:24]  *** Error codes and diagnostics ***
[2026-05-02 12:42:24]     "exeErrorCode": 0,
[2026-05-02 12:42:24]     "pilotErrorCode": 0,
[2026-05-02 12:42:24]  *** Listing of results directory ***
[2026-05-02 12:42:24] total 412296
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc      5631 May  2 00:55 queuedata.json
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc    683926 May  2 00:55 pilot3.tar.gz
[2026-05-02 12:42:24] -rwx------. 1 boinc boinc     36322 May  2 00:55 runpilot2-wrapper.sh
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc       100 May  2 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 12:42:24] -rwxr-xr-x. 1 boinc boinc      7986 May  2 10:42 run_atlas
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc       105 May  2 10:42 job.xml
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc      6308 May  2 10:42 init_data.xml
[2026-05-02 12:42:24] -rw-r--r--. 2 boinc boinc 222444017 May  2 10:42 EVNT.49263198._001824.pool.root.1
[2026-05-02 12:42:24] -rw-r--r--. 2 boinc boinc     15667 May  2 10:42 start_atlas.sh
[2026-05-02 12:42:24] drwxrwx--x. 2 boinc boinc        68 May  2 10:42 shared
[2026-05-02 12:42:24] -rw-r--r--. 2 boinc boinc    697431 May  2 10:42 input.tar.gz
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc         0 May  2 10:42 boinc_lockfile
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc      2575 May  2 10:42 pandaJob.out
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc   1002968 May  2 10:42 agis_schedconf.cvmfs.json
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc   1508687 May  2 10:42 agis_ddmendpoints.agis.ALL.json
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc       415 May  2 10:43 workernode_map.json
[2026-05-02 12:42:24] drwx------. 5 boinc boinc      4096 May  2 10:43 pilot3
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc 193615841 May  2 12:39 HITS.49263200._086226.pool.root.1
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc       487 May  2 12:40 boinc_task_state.xml
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc      1010 May  2 12:41 memory_monitor_summary.json
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc    313628 May  2 12:41 log.49263200._086226.job.log.tgz.1
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc      6335 May  2 12:41 heartbeat_new.json
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc      6226 May  2 12:41 heartbeat.json
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc        95 May  2 12:41 pilot_heartbeat.json
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc      4956 May  2 12:42 pilotlog.txt
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc    689239 May  2 12:42 log.49263200._086226.job.log.1
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc      8192 May  2 12:42 boinc_mmap_file
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc        27 May  2 12:42 wrapper_checkpoint.txt
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc       357 May  2 12:42 output.list
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc       410 May  2 12:42 runtime_log
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc   1024000 May  2 12:42 result.tar.gz
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc      8454 May  2 12:42 runtime_log.err
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc       652 May  2 12:42 2f731c9cc4da.diag
[2026-05-02 12:42:24] -rw-r--r--. 1 boinc boinc     20619 May  2 12:42 stderr.txt
[2026-05-02 12:42:24] HITS file was successfully produced:
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc 193615841 May  2 12:39 shared/HITS.pool.root.1
[2026-05-02 12:42:24]  *** Contents of shared directory: ***
[2026-05-02 12:42:24] total 408012
[2026-05-02 12:42:24] -rw-r--r--. 2 boinc boinc 222444017 May  2 10:42 ATLAS.root_0
[2026-05-02 12:42:24] -rw-r--r--. 2 boinc boinc     15667 May  2 10:42 start_atlas.sh
[2026-05-02 12:42:24] -rw-r--r--. 2 boinc boinc    697431 May  2 10:42 input.tar.gz
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc 193615841 May  2 12:39 HITS.pool.root.1
[2026-05-02 12:42:24] -rw-------. 1 boinc boinc   1024000 May  2 12:42 result.tar.gz
12:42:25 (13441): run_atlas exited; CPU time 50529.178668
12:42:25 (13441): called boinc_finish(0)

</stderr_txt>
]]>

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