Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:14:50 (1437129): wrapper (7.7.26015): starting
01:14:50 (1437129): wrapper: running run_atlas (--nthreads 12)
[2026-05-03 01:14:50] Arguments: --nthreads 12
[2026-05-03 01:14:50] Threads: 12
[2026-05-03 01:14:50] Checking for CVMFS
[2026-05-03 01:14:50] No cvmfs_config command found, will try listing directly
[2026-05-03 01:14:50] CVMFS is ok
[2026-05-03 01:14:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 01:14:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 01:14:50] Further information can be found at the LHC@home message board.
[2026-05-03 01:14:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 01:14:50] Checking for apptainer binary...
[2026-05-03 01:14:50] which: no apptainer in ((null))
[2026-05-03 01:14:50] apptainer is not installed, using version from CVMFS
[2026-05-03 01:14:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 01:14:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-05-03 01:14:50] apptainer works
[2026-05-03 01:14:50] Set ATHENA_PROC_NUMBER=12
[2026-05-03 01:14:50] Set ATHENA_CORE_NUMBER=12
[2026-05-03 01:14:50] Starting ATLAS job with PandaID=7123293663
[2026-05-03 01:14:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 01:45:10]  *** The last 200 lines of the pilot log: ***
[2026-05-03 01:45:10]  filesize=333994
[2026-05-03 01:45:10]  filetype=log
[2026-05-03 01:45:10]  guid=edac80c8-3fb9-4d1c-ae8d-725cffe11ad8
[2026-05-03 01:45:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-03 01:45:10]  is_altstaged=None
[2026-05-03 01:45:10]  is_tar=False
[2026-05-03 01:45:10]  lfn=log.49263200._085439.job.log.tgz.1
[2026-05-03 01:45:10]  mtime=0
[2026-05-03 01:45:10]  protocol_id=None
[2026-05-03 01:45:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-03 01:45:10]  replicas=None
[2026-05-03 01:45:10]  scope=mc23_13p6TeV
[2026-05-03 01:45:10]  status=None
[2026-05-03 01:45:10]  status_code=0
[2026-05-03 01:45:10]  storage_token=
[2026-05-03 01:45:10]  surl=/var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7123293663/log.49263200._085439.job.log.tgz.1
[2026-05-03 01:45:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/cd/log.49263200._085439.job.log.tgz.1
[2026-05-03 01:45:10]  workdir=None
[2026-05-03 01:45:10] ]
[2026-05-03 01:45:10] 2026-05-02 23:44:28,736 | INFO     | transferring file log.49263200._085439.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7123293663/log.49263200._085439.job.log.tgz.1 to /var/lib/
[2026-05-03 01:45:10] 2026-05-02 23:44:28,736 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7123293663/log.49263200._085439.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/2/
[2026-05-03 01:45:10] 2026-05-02 23:44:28,752 | INFO     | adding to output.list: log.49263200._085439.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/cd/log.49263200._085439.job.log.tg
[2026-05-03 01:45:10] 2026-05-02 23:44:28,753 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-03 01:45:10] 2026-05-02 23:44:28,753 | INFO     | summary of transferred files:
[2026-05-03 01:45:10] 2026-05-02 23:44:28,753 | INFO     |  -- lfn=log.49263200._085439.job.log.tgz.1, status_code=0, status=transferred
[2026-05-03 01:45:10] 2026-05-02 23:44:28,753 | INFO     | stage-out finished correctly
[2026-05-03 01:45:10] 2026-05-02 23:44:30,047 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 01:45:10] 2026-05-02 23:44:31,181 | INFO     | monitor loop #137: job 0:7123293663 is in state 'finished'
[2026-05-03 01:45:10] 2026-05-02 23:44:31,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,347 | INFO     | job 7123293663 has state=finished
[2026-05-03 01:45:10] 2026-05-02 23:44:31,347 | INFO     | preparing for final server update for job 7123293663 in state='finished'
[2026-05-03 01:45:10] 2026-05-02 23:44:31,792 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,792 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7123293663/jobReport.json
[2026-05-03 01:45:10] 2026-05-02 23:44:31,794 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/2/workernode_map.json
[2026-05-03 01:45:10] 2026-05-02 23:44:31,795 | INFO     | this job has now completed (state=finished)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,795 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,795 | INFO     | log transfer has been attempted: DONE
[2026-05-03 01:45:10] 2026-05-02 23:44:31,795 | INFO     | job 7123293663 has finished - writing final server update
[2026-05-03 01:45:10] 2026-05-02 23:44:31,795 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4049634/.job.ad'
[2026-05-03 01:45:10] 2026-05-02 23:44:31,795 | INFO     | total number of processed events: 400 (read)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,814 | INFO     | using path: /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7123293663/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,814 | INFO     | extracted standard info from prmon json
[2026-05-03 01:45:10] 2026-05-02 23:44:31,814 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 01:45:10] 2026-05-02 23:44:31,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 01:45:10] 2026-05-02 23:44:31,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 01:45:10] 2026-05-02 23:44:31,815 | INFO     | fitting pss+swap vs Time
[2026-05-03 01:45:10] 2026-05-02 23:44:31,815 | INFO     | sum of square deviations: 3294945.5
[2026-05-03 01:45:10] 2026-05-02 23:44:31,815 | INFO     | sum of deviations: -56682542.0
[2026-05-03 01:45:10] 2026-05-02 23:44:31,815 | INFO     | mean x (centered): 0.0
[2026-05-03 01:45:10] 2026-05-02 23:44:31,815 | INFO     | mean y: 2723715.727272727
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | intersect: 2723715.727272727
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | chi2: 0.0001425164005051575
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | current memory leak: -17.20 B/s (using 22 data points, chi2=0.00)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | could have reported an average CPU frequency of 3598 MHz (4 samples)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | ..............................
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . Timing measurements:
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . get job = 0 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . initial setup = 4 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . payload setup = 6 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . stage-in = 0 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . payload execution = 1743 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,816 | INFO     | . stage-out = 0 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,817 | INFO     | . log creation = 0 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,817 | INFO     | ..............................
[2026-05-03 01:45:10] 2026-05-02 23:44:31,867 | INFO     | 
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | job summary report
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | --------------------------------------------------
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | PanDA job id: 7123293663
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | task id: 49263200
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | errors: (none)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | pilot state: finished 
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | transexitcode: 0
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | exeerrorcode: 0
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | exeerrordiag: 
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | exitcode: 0
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | exitmsg: OK
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | cpuconsumptiontime: 18468 s
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | nevents: 400
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | neventsw: 0
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | pid: 1447961
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | pgrp: 1447961
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | corecount: 12
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | event service: False
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | sizes: {0: 2277121, 11: 2277121, 1754: 2302014, 1756: 2311036, 1757: 2311092, 1759: 2311286}
[2026-05-03 01:45:10] 2026-05-02 23:44:31,868 | INFO     | --------------------------------------------------
[2026-05-03 01:45:10] 2026-05-02 23:44:31,869 | INFO     | 
[2026-05-03 01:45:10] 2026-05-02 23:44:31,869 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/2
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | job 7123293663 has completed (purged errors)
[2026-05-03 01:45:10] 2026-05-02 23:44:31,891 | INFO     | overall cleanup function is called
[2026-05-03 01:45:10] 2026-05-02 23:44:32,898 | INFO     | --- collectZombieJob: --- 10, [1447961]
[2026-05-03 01:45:10] 2026-05-02 23:44:32,898 | INFO     | zombie collector waiting for pid 1447961
[2026-05-03 01:45:10] 2026-05-02 23:44:32,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 01:45:10] 2026-05-02 23:44:32,898 | INFO     | collected zombie processes
[2026-05-03 01:45:10] 2026-05-02 23:44:32,898 | INFO     | will attempt to kill all subprocesses of pid=1447961
[2026-05-03 01:45:10] 2026-05-02 23:44:33,199 | INFO     | process IDs to be killed: [1447961] (in reverse order)
[2026-05-03 01:45:10] 2026-05-02 23:44:33,347 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 01:45:10] 2026-05-02 23:44:33,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 01:45:10] 2026-05-02 23:44:33,371 | INFO     | did not find any defunct processes belonging to 1447961
[2026-05-03 01:45:10] 2026-05-02 23:44:33,394 | INFO     | did not find any defunct processes belonging to 1447961
[2026-05-03 01:45:10] 2026-05-02 23:44:33,394 | INFO     | Ready for new job
[2026-05-03 01:45:10] 2026-05-02 23:44:33,395 | INFO     | ***************************************
[2026-05-03 01:45:10] 2026-05-02 23:44:33,395 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 01:45:10] 2026-05-02 23:44:33,395 | INFO     | ***************************************
[2026-05-03 01:45:10] 2026-05-02 23:44:33,395 | INFO     | 
[2026-05-03 01:45:10] 2026-05-02 23:44:33,401 | INFO     | architecture information:
[2026-05-03 01:45:10] 2026-05-02 23:44:33,401 | INFO     | executing command: cat /etc/os-release
[2026-05-03 01:45:10] 2026-05-02 23:44:33,417 | INFO     | cat /etc/os-release:
[2026-05-03 01:45:10] NAME="CentOS Linux"
[2026-05-03 01:45:10] VERSION="7 (Core)"
[2026-05-03 01:45:10] ID="centos"
[2026-05-03 01:45:10] ID_LIKE="rhel fedora"
[2026-05-03 01:45:10] VERSION_ID="7"
[2026-05-03 01:45:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 01:45:10] ANSI_COLOR="0;31"
[2026-05-03 01:45:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 01:45:10] HOME_URL="https://www.centos.org/"
[2026-05-03 01:45:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 01:45:10] 
[2026-05-03 01:45:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 01:45:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 01:45:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 01:45:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 01:45:10] 
[2026-05-03 01:45:10] 2026-05-02 23:44:33,417 | INFO     | ***************************************
[2026-05-03 01:45:10] 2026-05-02 23:44:33,919 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/2
[2026-05-03 01:45:10] 2026-05-02 23:44:33,934 | INFO     | sufficient remaining disk space (249471959040 B)
[2026-05-03 01:45:10] 2026-05-02 23:44:33,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 01:45:10] 2026-05-02 23:44:33,935 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 01:45:10] 2026-05-02 23:44:33,935 | INFO     | update_server=False
[2026-05-03 01:45:10] 2026-05-02 23:44:33,935 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 01:45:10] 2026-05-02 23:44:33,970 | INFO     | all payload control threads have been joined
[2026-05-03 01:45:10] 2026-05-02 23:44:34,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 01:45:10] 2026-05-02 23:44:34,599 | INFO     | all data control threads have been joined
[2026-05-03 01:45:10] 2026-05-02 23:44:34,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 01:45:10] 2026-05-02 23:44:34,690 | INFO     | aborting loop
[2026-05-03 01:45:10] 2026-05-02 23:44:34,897 | INFO     | all job control threads have been joined
[2026-05-03 01:45:10] 2026-05-02 23:44:34,940 | INFO     | [job] retrieve thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:34,975 | INFO     | [payload] control thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,040 | INFO     | [payload] failed_post thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,482 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,483 | INFO     | [job] validate thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,548 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,604 | INFO     | [data] control thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,687 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,695 | INFO     | [job] job monitor thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,876 | INFO     | [data] copytool_in thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:35,903 | INFO     | [job] control thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:36,028 | INFO     | [payload] validate_post thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:36,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 01:45:10] 2026-05-02 23:44:36,318 | INFO     | [data] copytool_out thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:36,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 01:45:10] 2026-05-02 23:44:37,882 | INFO     | [job] queue monitor thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:40,106 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:44,937 | INFO     | job.realtimelogging is not enabled
[2026-05-03 01:45:10] 2026-05-02 23:44:45,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 01:45:10] 2026-05-02 23:44:57,155 [wrapper] supervise_pilot (15 min periods counter: 3)
[2026-05-03 01:45:10] 2026-05-02 23:45:04,614 | INFO     | [monitor] cgroup control has ended
[2026-05-03 01:45:10] 2026-05-02 23:45:05,352 | INFO     | PID=1441683 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 01:45:10] 2026-05-02 23:45:05,352 | INFO     | .. there are 17 such processes running
[2026-05-03 01:45:10] 2026-05-02 23:45:05,354 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 01:45:10] 2026-05-02 23:45:05,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 01:45:10] 2026-05-02 23:45:05,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 01:45:10] 2026-05-02 23:45:05,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22961699149632)>', '<ExcThread(monitor, started 22961464821504)>']
[2026-05-03 01:45:10] 2026-05-02 23:45:06,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 01:45:10] 2026-05-02 23:45:06,359 | INFO     | [monitor] control thread has ended
[2026-05-03 01:45:10] 2026-05-02 23:45:10,499 | INFO     | all workflow threads have been joined
[2026-05-03 01:45:10] 2026-05-02 23:45:10,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 01:45:10] 2026-05-02 23:45:10,499 | INFO     | traces error code: 0
[2026-05-03 01:45:10] 2026-05-02 23:45:10,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 01:45:10] 2026-05-02 23:45:10,632 [wrapper] ==== pilot stdout END ====
[2026-05-03 01:45:10] 2026-05-02 23:45:10,635 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 01:45:10] 2026-05-02 23:45:10,637 [wrapper] pilotpid: 1441683
[2026-05-03 01:45:10] 2026-05-02 23:45:10,639 [wrapper] Pilot exit status: 0
[2026-05-03 01:45:10] 2026-05-02 23:45:10,649 [wrapper] pandaids: 7123293663
[2026-05-03 01:45:10] 2026-05-02 23:45:10,752 [wrapper] cleanup supervisor_pilot 1695160 1441684
[2026-05-03 01:45:10] 2026-05-02 23:45:10,755 [wrapper] Test setup, not cleaning
[2026-05-03 01:45:10] 2026-05-02 23:45:10,757 [wrapper] apfmon messages muted
[2026-05-03 01:45:10] 2026-05-02 23:45:10,760 [wrapper] ==== wrapper stdout END ====
[2026-05-03 01:45:10] 2026-05-02 23:45:10,762 [wrapper] ==== wrapper stderr END ====
[2026-05-03 01:45:10]  *** Error codes and diagnostics ***
[2026-05-03 01:45:10]     "exeErrorCode": 0,
[2026-05-03 01:45:10]     "pilotErrorCode": 0,
[2026-05-03 01:45:10]  *** Listing of results directory ***
[2026-05-03 01:45:10] total 410948
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc      5631 May  2 00:55 queuedata.json
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc    683926 May  2 00:55 pilot3.tar.gz
[2026-05-03 01:45:10] -rwx------. 1 boinc boinc     36322 May  2 00:55 runpilot2-wrapper.sh
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc       100 May  3 01:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 01:45:10] -rwxr-xr-x. 1 boinc boinc      7986 May  3 01:14 run_atlas
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc       105 May  3 01:14 job.xml
[2026-05-03 01:45:10] -rw-r--r--. 2 boinc boinc 223426626 May  3 01:14 EVNT.49263198._001795.pool.root.1
[2026-05-03 01:45:10] -rw-r--r--. 2 boinc boinc     15667 May  3 01:14 start_atlas.sh
[2026-05-03 01:45:10] drwxrwx--x. 2 boinc boinc      4096 May  3 01:14 shared
[2026-05-03 01:45:10] -rw-r--r--. 2 boinc boinc    697426 May  3 01:14 input.tar.gz
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc      6631 May  3 01:14 init_data.xml
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc         0 May  3 01:14 boinc_lockfile
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc      2577 May  3 01:14 pandaJob.out
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc   1002972 May  3 01:14 agis_schedconf.cvmfs.json
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc   1508687 May  3 01:14 agis_ddmendpoints.agis.ALL.json
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc       445 May  3 01:15 workernode_map.json
[2026-05-03 01:45:10] drwx------. 5 boinc boinc      4096 May  3 01:15 pilot3
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc 192148197 May  3 01:44 HITS.49263200._085439.pool.root.1
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc       487 May  3 01:44 boinc_task_state.xml
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc      1026 May  3 01:44 memory_monitor_summary.json
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc    333994 May  3 01:44 log.49263200._085439.job.log.tgz.1
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc      6382 May  3 01:44 heartbeat_new.json
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc      6273 May  3 01:44 heartbeat.json
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc        27 May  3 01:45 wrapper_checkpoint.txt
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc      8192 May  3 01:45 boinc_mmap_file
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc        95 May  3 01:45 pilot_heartbeat.json
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc      4906 May  3 01:45 pilotlog.txt
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc    213382 May  3 01:45 log.49263200._085439.job.log.1
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc       357 May  3 01:45 output.list
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc       410 May  3 01:45 runtime_log
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc    563200 May  3 01:45 result.tar.gz
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc      8846 May  3 01:45 runtime_log.err
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc       660 May  3 01:45 2f55f5ddf8c5.diag
[2026-05-03 01:45:10] -rw-r--r--. 1 boinc boinc     20984 May  3 01:45 stderr.txt
[2026-05-03 01:45:10] HITS file was successfully produced:
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc 192148197 May  3 01:44 shared/HITS.pool.root.1
[2026-05-03 01:45:10]  *** Contents of shared directory: ***
[2026-05-03 01:45:10] total 407100
[2026-05-03 01:45:10] -rw-r--r--. 2 boinc boinc 223426626 May  3 01:14 ATLAS.root_0
[2026-05-03 01:45:10] -rw-r--r--. 2 boinc boinc     15667 May  3 01:14 start_atlas.sh
[2026-05-03 01:45:10] -rw-r--r--. 2 boinc boinc    697426 May  3 01:14 input.tar.gz
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc 192148197 May  3 01:44 HITS.pool.root.1
[2026-05-03 01:45:10] -rw-------. 1 boinc boinc    563200 May  3 01:45 result.tar.gz
01:45:12 (1437129): run_atlas exited; CPU time 18513.157627
01:45:12 (1437129): called boinc_finish(0)

</stderr_txt>
]]>

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