Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:01:32 (3395763): wrapper (7.7.26015): starting
10:01:32 (3395763): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 10:01:32] Arguments: --nthreads 4
[2026-05-05 10:01:32] Threads: 4
[2026-05-05 10:01:32] Checking for CVMFS
[2026-05-05 10:01:32] No cvmfs_config command found, will try listing directly
[2026-05-05 10:01:32] CVMFS is ok
[2026-05-05 10:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 10:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 10:01:32] Further information can be found at the LHC@home message board.
[2026-05-05 10:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 10:01:32] Checking for apptainer binary...
[2026-05-05 10:01:32] which: no apptainer in ((null))
[2026-05-05 10:01:32] apptainer is not installed, using version from CVMFS
[2026-05-05 10:01:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 10:01:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-05 10:01:33] apptainer works
[2026-05-05 10:01:33] Set ATHENA_PROC_NUMBER=4
[2026-05-05 10:01:33] Set ATHENA_CORE_NUMBER=4
[2026-05-05 10:01:33] Starting ATLAS job with PandaID=7123293531
[2026-05-05 10:01:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 12:02:54]  *** The last 200 lines of the pilot log: ***
[2026-05-05 12:02:54] 2026-05-05 09:58:11,161 | INFO     | intersect: 2305551.3211009176
[2026-05-05 12:02:54] 2026-05-05 09:58:11,161 | INFO     | chi2: 1.1777786843498168
[2026-05-05 12:02:54] 2026-05-05 09:58:11,162 | INFO     | current chi2=1.1777786843498168 (change=-0.1597261211624465 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,162 | INFO     | right removable region: 108
[2026-05-05 12:02:54] 2026-05-05 09:58:11,162 | INFO     | sum of square deviations: 401533110.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,162 | INFO     | sum of deviations: -973052906.9999998
[2026-05-05 12:02:54] 2026-05-05 09:58:11,162 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,163 | INFO     | mean y: 2336920.009174312
[2026-05-05 12:02:54] 2026-05-05 09:58:11,163 | INFO     | intersect: 2336920.009174312
[2026-05-05 12:02:54] 2026-05-05 09:58:11,163 | INFO     | chi2: 0.005564950047868258
[2026-05-05 12:02:54] 2026-05-05 09:58:11,163 | INFO     | current chi2=0.005564950047868258 (change=99.52674990634584 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,163 | INFO     | sum of square deviations: 348769330.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | sum of deviations: -129064532.00000001
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | mean y: 2334474.8653846155
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | intersect: 2334474.8653846155
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | chi2: 0.003523788671510796
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | current chi2=0.003523788671510796 (change=36.67888047152123 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,164 | INFO     | sum of square deviations: 300842850.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,165 | INFO     | sum of deviations: 439781695.99999994
[2026-05-05 12:02:54] 2026-05-05 09:58:11,165 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,165 | INFO     | mean y: 2332714.3535353537
[2026-05-05 12:02:54] 2026-05-05 09:58:11,165 | INFO     | intersect: 2332714.3535353537
[2026-05-05 12:02:54] 2026-05-05 09:58:11,165 | INFO     | chi2: 0.00021740919151108827
[2026-05-05 12:02:54] 2026-05-05 09:58:11,165 | INFO     | current chi2=0.00021740919151108827 (change=93.83024319055218 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,166 | INFO     | sum of square deviations: 257521107.5
[2026-05-05 12:02:54] 2026-05-05 09:58:11,166 | INFO     | sum of deviations: 259597639.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,166 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,166 | INFO     | mean y: 2333346.2978723403
[2026-05-05 12:02:54] 2026-05-05 09:58:11,166 | INFO     | intersect: 2333346.2978723403
[2026-05-05 12:02:54] 2026-05-05 09:58:11,167 | INFO     | chi2: 0.00013119982366565174
[2026-05-05 12:02:54] 2026-05-05 09:58:11,167 | INFO     | current chi2=0.00013119982366565174 (change=39.65304651852297 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,167 | INFO     | sum of square deviations: 218571540.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,167 | INFO     | sum of deviations: 83014106.99999999
[2026-05-05 12:02:54] 2026-05-05 09:58:11,167 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,168 | INFO     | mean y: 2334035.6853932585
[2026-05-05 12:02:54] 2026-05-05 09:58:11,168 | INFO     | intersect: 2334035.6853932585
[2026-05-05 12:02:54] 2026-05-05 09:58:11,168 | INFO     | chi2: 2.3953365537040696e-05
[2026-05-05 12:02:54] 2026-05-05 09:58:11,168 | INFO     | current chi2=2.3953365537040696e-05 (change=81.74283709551074 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,168 | INFO     | sum of square deviations: 183761585.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | sum of deviations: 62757166.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | mean y: 2334120.761904762
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | intersect: 2334120.761904762
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | chi2: 1.9100536571222617e-05
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | current chi2=1.9100536571222617e-05 (change=20.25948695315413 %)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,169 | INFO     | left removable region: 30
[2026-05-05 12:02:54] 2026-05-05 09:58:11,170 | INFO     | sum of square deviations: 147126479.5
[2026-05-05 12:02:54] 2026-05-05 09:58:11,170 | INFO     | sum of deviations: 43765731.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,170 | INFO     | mean x (centered): 0.0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,170 | INFO     | mean y: 2334025.564102564
[2026-05-05 12:02:54] 2026-05-05 09:58:11,170 | INFO     | intersect: 2334025.564102564
[2026-05-05 12:02:54] 2026-05-05 09:58:11,171 | INFO     | chi2: 1.8825041171521562e-05
[2026-05-05 12:02:54] 2026-05-05 09:58:11,171 | INFO     | current memory leak: 0.30 B/s (using 78 data points, chi2=0.00)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,171 | INFO     | could have reported an average CPU frequency of 2754 MHz (7 samples)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,171 | INFO     | ..............................
[2026-05-05 12:02:54] 2026-05-05 09:58:11,171 | INFO     | . Timing measurements:
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . get job = 0 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . initial setup = 7 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . payload setup = 13 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . stage-in = 0 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . payload execution = 6942 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . stage-out = 0 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | . log creation = 0 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,172 | INFO     | ..............................
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | 
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | job summary report
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | --------------------------------------------------
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | PanDA job id: 7123293531
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | task id: 49263200
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | errors: (none)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,259 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | pilot state: finished 
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | transexitcode: 0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | exeerrorcode: 0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | exeerrordiag: 
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | exitcode: 0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | exitmsg: OK
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | cpuconsumptiontime: 26666 s
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | nevents: 400
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | neventsw: 0
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | pid: 3405286
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | pgrp: 3405286
[2026-05-05 12:02:54] 2026-05-05 09:58:11,260 | INFO     | corecount: 4
[2026-05-05 12:02:54] 2026-05-05 09:58:11,261 | INFO     | event service: False
[2026-05-05 12:02:54] 2026-05-05 09:58:11,261 | INFO     | sizes: {0: 2270399, 1: 2272228, 12: 2272228, 6959: 2299452, 6961: 2308472, 6962: 2308528, 6964: 2308850}
[2026-05-05 12:02:54] 2026-05-05 09:58:11,261 | INFO     | --------------------------------------------------
[2026-05-05 12:02:54] 2026-05-05 09:58:11,261 | INFO     | 
[2026-05-05 12:02:54] 2026-05-05 09:58:11,261 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/4
[2026-05-05 12:02:54] 2026-05-05 09:58:11,292 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | job 7123293531 has completed (purged errors)
[2026-05-05 12:02:54] 2026-05-05 09:58:11,294 | INFO     | overall cleanup function is called
[2026-05-05 12:02:54] 2026-05-05 09:58:12,302 | INFO     | --- collectZombieJob: --- 10, [3405286]
[2026-05-05 12:02:54] 2026-05-05 09:58:12,303 | INFO     | zombie collector waiting for pid 3405286
[2026-05-05 12:02:54] 2026-05-05 09:58:12,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 12:02:54] 2026-05-05 09:58:12,303 | INFO     | collected zombie processes
[2026-05-05 12:02:54] 2026-05-05 09:58:12,303 | INFO     | will attempt to kill all subprocesses of pid=3405286
[2026-05-05 12:02:54] 2026-05-05 09:58:12,722 | INFO     | process IDs to be killed: [3405286] (in reverse order)
[2026-05-05 12:02:54] 2026-05-05 09:58:12,979 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 12:02:54] 2026-05-05 09:58:12,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 12:02:54] 2026-05-05 09:58:13,007 | INFO     | did not find any defunct processes belonging to 3405286
[2026-05-05 12:02:54] 2026-05-05 09:58:13,031 | INFO     | did not find any defunct processes belonging to 3405286
[2026-05-05 12:02:54] 2026-05-05 09:58:13,031 | INFO     | Ready for new job
[2026-05-05 12:02:54] 2026-05-05 09:58:13,033 | INFO     | ***************************************
[2026-05-05 12:02:54] 2026-05-05 09:58:13,033 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 12:02:54] 2026-05-05 09:58:13,033 | INFO     | ***************************************
[2026-05-05 12:02:54] 2026-05-05 09:58:13,033 | INFO     | 
[2026-05-05 12:02:54] 2026-05-05 09:58:13,041 | INFO     | architecture information:
[2026-05-05 12:02:54] 2026-05-05 09:58:13,042 | INFO     | executing command: cat /etc/os-release
[2026-05-05 12:02:54] 2026-05-05 09:58:13,067 | INFO     | cat /etc/os-release:
[2026-05-05 12:02:54] NAME="CentOS Linux"
[2026-05-05 12:02:54] VERSION="7 (Core)"
[2026-05-05 12:02:54] ID="centos"
[2026-05-05 12:02:54] ID_LIKE="rhel fedora"
[2026-05-05 12:02:54] VERSION_ID="7"
[2026-05-05 12:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 12:02:54] ANSI_COLOR="0;31"
[2026-05-05 12:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 12:02:54] HOME_URL="https://www.centos.org/"
[2026-05-05 12:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 12:02:54] 
[2026-05-05 12:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 12:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 12:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 12:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 12:02:54] 
[2026-05-05 12:02:54] 2026-05-05 09:58:13,067 | INFO     | ***************************************
[2026-05-05 12:02:54] 2026-05-05 09:58:13,570 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/4
[2026-05-05 12:02:54] 2026-05-05 09:58:13,591 | INFO     | sufficient remaining disk space (259808821248 B)
[2026-05-05 12:02:54] 2026-05-05 09:58:13,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 12:02:54] 2026-05-05 09:58:13,591 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 12:02:54] 2026-05-05 09:58:13,591 | INFO     | update_server=False
[2026-05-05 12:02:54] 2026-05-05 09:58:13,592 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 12:02:54] 2026-05-05 09:58:13,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 12:02:54] 2026-05-05 09:58:13,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 12:02:54] 2026-05-05 09:58:13,849 | INFO     | aborting loop
[2026-05-05 12:02:54] 2026-05-05 09:58:14,083 | INFO     | all data control threads have been joined
[2026-05-05 12:02:54] 2026-05-05 09:58:14,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 12:02:54] 2026-05-05 09:58:14,597 | INFO     | [job] retrieve thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:14,766 | INFO     | all payload control threads have been joined
[2026-05-05 12:02:54] 2026-05-05 09:58:14,854 | INFO     | [job] job monitor thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:14,932 | INFO     | all job control threads have been joined
[2026-05-05 12:02:54] 2026-05-05 09:58:14,972 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:14,988 | INFO     | [payload] validate_post thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,089 | INFO     | [data] control thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,091 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,481 | INFO     | [data] copytool_in thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,598 | INFO     | [data] copytool_out thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,617 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,772 | INFO     | [payload] control thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,935 | INFO     | [job] validate thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,938 | INFO     | [job] control thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:15,993 | INFO     | [payload] failed_post thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:16,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 12:02:54] 2026-05-05 09:58:17,274 | INFO     | [job] queue monitor thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:18,490 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:23,932 | INFO     | job.realtimelogging is not enabled
[2026-05-05 12:02:54] 2026-05-05 09:58:24,938 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 12:02:54] 2026-05-05 09:58:43,719 | INFO     | PID=3400003 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 12:02:54] 2026-05-05 09:58:43,719 | INFO     | .. there are 12 such processes running
[2026-05-05 12:02:54] 2026-05-05 09:58:43,720 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 12:02:54] 2026-05-05 09:58:43,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 12:02:54] 2026-05-05 09:58:43,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 12:02:54] 2026-05-05 09:59:04,818 | INFO     | [monitor] cgroup control has ended
[2026-05-05 12:02:54] 2026-05-05 09:59:06,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22743539668800)>', '<ExcThread(monitor, started 22743235180288)>']
[2026-05-05 12:02:54] 2026-05-05 09:59:06,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 12:02:54] 2026-05-05 09:59:06,835 | INFO     | [monitor] control thread has ended
[2026-05-05 12:02:54] 2026-05-05 09:59:11,434 | INFO     | all workflow threads have been joined
[2026-05-05 12:02:54] 2026-05-05 09:59:11,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 12:02:54] 2026-05-05 09:59:11,435 | INFO     | traces error code: 0
[2026-05-05 12:02:54] 2026-05-05 09:59:11,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 12:02:54] 2026-05-05 09:59:11,595 [wrapper] ==== pilot stdout END ====
[2026-05-05 12:02:54] 2026-05-05 09:59:11,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 12:02:54] 2026-05-05 09:59:11,603 [wrapper] pilotpid: 3400003
[2026-05-05 12:02:54] 2026-05-05 09:59:11,607 [wrapper] Pilot exit status: 0
[2026-05-05 12:02:54] 2026-05-05 09:59:11,621 [wrapper] pandaids: 7123293531
[2026-05-05 12:02:54] 2026-05-05 09:59:11,801 [wrapper] cleanup supervisor_pilot 3638473 3400004
[2026-05-05 12:02:54] 2026-05-05 09:59:11,805 [wrapper] Test setup, not cleaning
[2026-05-05 12:02:54] 2026-05-05 09:59:11,810 [wrapper] apfmon messages muted
[2026-05-05 12:02:54] 2026-05-05 09:59:11,814 [wrapper] ==== wrapper stdout END ====
[2026-05-05 12:02:54] 2026-05-05 09:59:11,817 [wrapper] ==== wrapper stderr END ====
[2026-05-05 12:02:54]  *** Error codes and diagnostics ***
[2026-05-05 12:02:54]     "exeErrorCode": 0,
[2026-05-05 12:02:54]     "pilotErrorCode": 0,
[2026-05-05 12:02:54]  *** Listing of results directory ***
[2026-05-05 12:02:54] total 421648
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc      5631 May  2 00:55 queuedata.json
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc    683926 May  2 00:55 pilot3.tar.gz
[2026-05-05 12:02:54] -rwx------. 1 boinc boinc     36322 May  2 00:55 runpilot2-wrapper.sh
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc       100 May  5 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 12:02:54] -rwxr-xr-x. 1 boinc boinc      7986 May  5 09:18 run_atlas
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc       105 May  5 09:18 job.xml
[2026-05-05 12:02:54] -rw-r--r--. 2 boinc boinc 226651280 May  5 10:01 EVNT.49263198._001785.pool.root.1
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc      6540 May  5 10:01 init_data.xml
[2026-05-05 12:02:54] -rw-r--r--. 2 boinc boinc     15667 May  5 10:01 start_atlas.sh
[2026-05-05 12:02:54] drwxrwx--x. 2 boinc boinc      4096 May  5 10:01 shared
[2026-05-05 12:02:54] -rw-r--r--. 2 boinc boinc    697428 May  5 10:01 input.tar.gz
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc         0 May  5 10:01 boinc_lockfile
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc      2577 May  5 10:01 pandaJob.out
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc   1001025 May  5 10:01 agis_schedconf.cvmfs.json
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc   1505918 May  5 10:01 agis_ddmendpoints.agis.ALL.json
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc       443 May  5 10:01 workernode_map.json
[2026-05-05 12:02:54] drwx------. 5 boinc boinc      4096 May  5 10:01 pilot3
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc 199113415 May  5 11:57 HITS.49263200._085307.pool.root.1
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc        95 May  5 11:57 pilot_heartbeat.json
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc       487 May  5 11:57 boinc_task_state.xml
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc      1038 May  5 11:58 memory_monitor_summary.json
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc    272955 May  5 11:58 log.49263200._085307.job.log.tgz.1
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc      6380 May  5 11:58 heartbeat_new.json
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc      6271 May  5 11:58 heartbeat.json
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc      4905 May  5 11:59 pilotlog.txt
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc    661802 May  5 11:59 log.49263200._085307.job.log.1
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc       357 May  5 11:59 output.list
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc       410 May  5 11:59 runtime_log
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc    952320 May  5 11:59 result.tar.gz
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc      8827 May  5 11:59 runtime_log.err
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc       662 May  5 11:59 2f5462dc0051.diag
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc        27 May  5 12:02 wrapper_checkpoint.txt
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc      8192 May  5 12:02 boinc_mmap_file
[2026-05-05 12:02:54] -rw-r--r--. 1 boinc boinc     20613 May  5 12:02 stderr.txt
[2026-05-05 12:02:54] HITS file was successfully produced:
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc 199113415 May  5 11:57 shared/HITS.pool.root.1
[2026-05-05 12:02:54]  *** Contents of shared directory: ***
[2026-05-05 12:02:54] total 417428
[2026-05-05 12:02:54] -rw-r--r--. 2 boinc boinc 226651280 May  5 10:01 ATLAS.root_0
[2026-05-05 12:02:54] -rw-r--r--. 2 boinc boinc     15667 May  5 10:01 start_atlas.sh
[2026-05-05 12:02:54] -rw-r--r--. 2 boinc boinc    697428 May  5 10:01 input.tar.gz
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc 199113415 May  5 11:57 HITS.pool.root.1
[2026-05-05 12:02:54] -rw-------. 1 boinc boinc    952320 May  5 11:59 result.tar.gz
12:02:55 (3395763): run_atlas exited; CPU time 27042.666012
12:02:55 (3395763): called boinc_finish(0)

</stderr_txt>
]]>

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