Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:53 (323304): wrapper (7.7.26015): starting
09:43:53 (323304): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 09:43:53] Arguments: --nthreads 4
[2026-05-03 09:43:53] Threads: 4
[2026-05-03 09:43:53] Checking for CVMFS
[2026-05-03 09:43:53] No cvmfs_config command found, will try listing directly
[2026-05-03 09:43:53] CVMFS is ok
[2026-05-03 09:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 09:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 09:43:53] Further information can be found at the LHC@home message board.
[2026-05-03 09:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 09:43:53] Checking for apptainer binary...
[2026-05-03 09:43:53] which: no apptainer in ((null))
[2026-05-03 09:43:53] apptainer is not installed, using version from CVMFS
[2026-05-03 09:43:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 09:43:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-03 09:43:53] apptainer works
[2026-05-03 09:43:53] Set ATHENA_PROC_NUMBER=4
[2026-05-03 09:43:53] Set ATHENA_CORE_NUMBER=4
[2026-05-03 09:43:53] Starting ATLAS job with PandaID=7123281601
[2026-05-03 09:43:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 13:44:00]  *** The last 200 lines of the pilot log: ***
[2026-05-03 13:44:00] 2026-05-03 11:37:41,907 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,907 | INFO     | log transfer has been attempted: DONE
[2026-05-03 13:44:00] 2026-05-03 11:37:41,907 | INFO     | job 7123281601 has finished - writing final server update
[2026-05-03 13:44:00] 2026-05-03 11:37:41,908 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2297467/.job.ad'
[2026-05-03 13:44:00] 2026-05-03 11:37:41,908 | INFO     | total number of processed events: 400 (read)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,921 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7123281601/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,922 | INFO     | extracted standard info from prmon json
[2026-05-03 13:44:00] 2026-05-03 11:37:41,922 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 13:44:00] 2026-05-03 11:37:41,923 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 13:44:00] 2026-05-03 11:37:41,923 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 13:44:00] 2026-05-03 11:37:41,927 | INFO     | fitting pss+swap vs Time
[2026-05-03 13:44:00] 2026-05-03 11:37:41,928 | INFO     | sum of square deviations: 3772712597.5
[2026-05-03 13:44:00] 2026-05-03 11:37:41,929 | INFO     | sum of deviations: 14605477812.499996
[2026-05-03 13:44:00] 2026-05-03 11:37:41,929 | INFO     | mean x (centered): 0.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,930 | INFO     | mean y: 2308400.013043478
[2026-05-03 13:44:00] 2026-05-03 11:37:41,930 | INFO     | intersect: 2308400.013043478
[2026-05-03 13:44:00] 2026-05-03 11:37:41,930 | INFO     | chi2: 2.016732020341113
[2026-05-03 13:44:00] 2026-05-03 11:37:41,930 | INFO     | sum of square deviations: 3531973200.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,932 | INFO     | sum of deviations: 27236840441.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,932 | INFO     | mean x (centered): 0.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,932 | INFO     | mean y: 2316254.311111111
[2026-05-03 13:44:00] 2026-05-03 11:37:41,932 | INFO     | intersect: 2316254.311111111
[2026-05-03 13:44:00] 2026-05-03 11:37:41,933 | INFO     | chi2: 1.3499717332932075
[2026-05-03 13:44:00] 2026-05-03 11:37:41,933 | INFO     | current chi2=1.3499717332932075 (change=33.061422158365325 %)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,933 | INFO     | sum of square deviations: 3301699115.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,935 | INFO     | sum of deviations: 26469288603.999996
[2026-05-03 13:44:00] 2026-05-03 11:37:41,935 | INFO     | mean x (centered): 0.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,935 | INFO     | mean y: 2315746.0545454547
[2026-05-03 13:44:00] 2026-05-03 11:37:41,935 | INFO     | intersect: 2315746.0545454547
[2026-05-03 13:44:00] 2026-05-03 11:37:41,935 | INFO     | chi2: 1.3506253981239036
[2026-05-03 13:44:00] 2026-05-03 11:37:41,936 | INFO     | current chi2=1.3506253981239036 (change=-0.048420630934358444 %)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,936 | INFO     | right removable region: 219
[2026-05-03 13:44:00] 2026-05-03 11:37:41,936 | INFO     | sum of square deviations: 3531973200.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,937 | INFO     | sum of deviations: -15569472188.999998
[2026-05-03 13:44:00] 2026-05-03 11:37:41,938 | INFO     | mean x (centered): 0.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,938 | INFO     | mean y: 2327310.728888889
[2026-05-03 13:44:00] 2026-05-03 11:37:41,938 | INFO     | intersect: 2327310.728888889
[2026-05-03 13:44:00] 2026-05-03 11:37:41,938 | INFO     | chi2: 0.6925736674522462
[2026-05-03 13:44:00] 2026-05-03 11:37:41,938 | INFO     | current chi2=0.6925736674522462 (change=65.65861698694587 %)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,939 | INFO     | sum of square deviations: 3301699115.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,940 | INFO     | sum of deviations: -15629775294.5
[2026-05-03 13:44:00] 2026-05-03 11:37:41,940 | INFO     | mean x (centered): 0.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,940 | INFO     | mean y: 2327339.977272727
[2026-05-03 13:44:00] 2026-05-03 11:37:41,940 | INFO     | intersect: 2327339.977272727
[2026-05-03 13:44:00] 2026-05-03 11:37:41,941 | INFO     | chi2: 0.6905408101955998
[2026-05-03 13:44:00] 2026-05-03 11:37:41,941 | INFO     | current chi2=0.6905408101955998 (change=0.29352216986890406 %)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,941 | INFO     | left removable region: 10
[2026-05-03 13:44:00] 2026-05-03 11:37:41,941 | INFO     | sum of square deviations: 2830787960.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,943 | INFO     | sum of deviations: -3000292380.9999995
[2026-05-03 13:44:00] 2026-05-03 11:37:41,943 | INFO     | mean x (centered): 0.0
[2026-05-03 13:44:00] 2026-05-03 11:37:41,943 | INFO     | mean y: 2335928.5598086123
[2026-05-03 13:44:00] 2026-05-03 11:37:41,943 | INFO     | intersect: 2335928.5598086123
[2026-05-03 13:44:00] 2026-05-03 11:37:41,943 | INFO     | chi2: 0.009456719293930013
[2026-05-03 13:44:00] 2026-05-03 11:37:41,944 | INFO     | current memory leak: -1.06 B/s (using 209 data points, chi2=0.01)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,944 | INFO     | could have reported an average CPU frequency of 2605 MHz (11 samples)
[2026-05-03 13:44:00] 2026-05-03 11:37:41,944 | INFO     | ..............................
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . Timing measurements:
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . get job = 0 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . initial setup = 5 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . payload setup = 10 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . stage-in = 0 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . payload execution = 13982 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . stage-out = 1 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | . log creation = 0 s
[2026-05-03 13:44:00] 2026-05-03 11:37:41,945 | INFO     | ..............................
[2026-05-03 13:44:00] 2026-05-03 11:37:42,357 | INFO     | 
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | job summary report
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | --------------------------------------------------
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | PanDA job id: 7123281601
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | task id: 49645815
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | errors: (none)
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | pilot state: finished 
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | transexitcode: 0
[2026-05-03 13:44:00] 2026-05-03 11:37:42,359 | INFO     | exeerrorcode: 0
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | exeerrordiag: 
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | exitcode: 0
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | exitmsg: OK
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | cpuconsumptiontime: 53614 s
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | nevents: 400
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | neventsw: 0
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | pid: 332225
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | pgrp: 332225
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | corecount: 4
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | event service: False
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | sizes: {0: 2274748, 1: 2277245, 12: 2277245, 13996: 2307576, 13998: 2316596, 14000: 2316974}
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | --------------------------------------------------
[2026-05-03 13:44:00] 2026-05-03 11:37:42,360 | INFO     | 
[2026-05-03 13:44:00] 2026-05-03 11:37:42,361 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-05-03 13:44:00] 2026-05-03 11:37:42,383 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 13:44:00] 2026-05-03 11:37:42,385 | INFO     | job 7123281601 has completed (purged errors)
[2026-05-03 13:44:00] 2026-05-03 11:37:42,386 | INFO     | overall cleanup function is called
[2026-05-03 13:44:00] 2026-05-03 11:37:43,391 | INFO     | --- collectZombieJob: --- 10, [332225]
[2026-05-03 13:44:00] 2026-05-03 11:37:43,392 | INFO     | zombie collector waiting for pid 332225
[2026-05-03 13:44:00] 2026-05-03 11:37:43,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 13:44:00] 2026-05-03 11:37:43,392 | INFO     | collected zombie processes
[2026-05-03 13:44:00] 2026-05-03 11:37:43,392 | INFO     | will attempt to kill all subprocesses of pid=332225
[2026-05-03 13:44:00] 2026-05-03 11:37:43,696 | INFO     | process IDs to be killed: [332225] (in reverse order)
[2026-05-03 13:44:00] 2026-05-03 11:37:43,825 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 13:44:00] 2026-05-03 11:37:43,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 13:44:00] 2026-05-03 11:37:43,838 | INFO     | did not find any defunct processes belonging to 332225
[2026-05-03 13:44:00] 2026-05-03 11:37:43,850 | INFO     | did not find any defunct processes belonging to 332225
[2026-05-03 13:44:00] 2026-05-03 11:37:43,851 | INFO     | Ready for new job
[2026-05-03 13:44:00] 2026-05-03 11:37:43,853 | INFO     | ***************************************
[2026-05-03 13:44:00] 2026-05-03 11:37:43,853 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 13:44:00] 2026-05-03 11:37:43,853 | INFO     | ***************************************
[2026-05-03 13:44:00] 2026-05-03 11:37:43,854 | INFO     | 
[2026-05-03 13:44:00] 2026-05-03 11:37:43,857 | INFO     | architecture information:
[2026-05-03 13:44:00] 2026-05-03 11:37:43,858 | INFO     | executing command: cat /etc/os-release
[2026-05-03 13:44:00] 2026-05-03 11:37:43,876 | INFO     | cat /etc/os-release:
[2026-05-03 13:44:00] NAME="CentOS Linux"
[2026-05-03 13:44:00] VERSION="7 (Core)"
[2026-05-03 13:44:00] ID="centos"
[2026-05-03 13:44:00] ID_LIKE="rhel fedora"
[2026-05-03 13:44:00] VERSION_ID="7"
[2026-05-03 13:44:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 13:44:00] ANSI_COLOR="0;31"
[2026-05-03 13:44:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 13:44:00] HOME_URL="https://www.centos.org/"
[2026-05-03 13:44:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 13:44:00] 
[2026-05-03 13:44:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 13:44:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 13:44:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 13:44:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 13:44:00] 
[2026-05-03 13:44:00] 2026-05-03 11:37:43,877 | INFO     | ***************************************
[2026-05-03 13:44:00] 2026-05-03 11:37:44,380 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-05-03 13:44:00] 2026-05-03 11:37:44,396 | INFO     | sufficient remaining disk space (54287925248 B)
[2026-05-03 13:44:00] 2026-05-03 11:37:44,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 13:44:00] 2026-05-03 11:37:44,397 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 13:44:00] 2026-05-03 11:37:44,397 | INFO     | update_server=False
[2026-05-03 13:44:00] 2026-05-03 11:37:44,397 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 13:44:00] 2026-05-03 11:37:44,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 13:44:00] 2026-05-03 11:37:44,824 | INFO     | all data control threads have been joined
[2026-05-03 13:44:00] 2026-05-03 11:37:45,049 | INFO     | all job control threads have been joined
[2026-05-03 13:44:00] 2026-05-03 11:37:45,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 13:44:00] 2026-05-03 11:37:45,261 | INFO     | aborting loop
[2026-05-03 13:44:00] 2026-05-03 11:37:45,403 | INFO     | [job] retrieve thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:45,611 | INFO     | [job] validate thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:45,719 | INFO     | all payload control threads have been joined
[2026-05-03 13:44:00] 2026-05-03 11:37:45,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 13:44:00] 2026-05-03 11:37:45,752 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:45,779 | INFO     | [payload] validate_post thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:45,830 | INFO     | [data] control thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:45,988 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:46,055 | INFO     | [job] control thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:46,266 | INFO     | [job] job monitor thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:46,350 | INFO     | [data] copytool_in thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:46,714 | INFO     | [payload] failed_post thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:46,726 | INFO     | [payload] control thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:46,762 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:47,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 13:44:00] 2026-05-03 11:37:47,749 | INFO     | [data] copytool_out thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:48,053 | INFO     | [job] queue monitor thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:48,403 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:37:55,425 | INFO     | job.realtimelogging is not enabled
[2026-05-03 13:44:00] 2026-05-03 11:37:56,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 13:44:00] 2026-05-03 11:38:15,232 | INFO     | PID=327168 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-03 13:44:00] 2026-05-03 11:38:15,232 | INFO     | .. there are 10 such processes running
[2026-05-03 13:44:00] 2026-05-03 11:38:15,234 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 13:44:00] 2026-05-03 11:38:15,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 13:44:00] 2026-05-03 11:38:15,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 13:44:00] 2026-05-03 11:38:33,152 | INFO     | [monitor] cgroup control has ended
[2026-05-03 13:44:00] 2026-05-03 11:38:35,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22836393428800)>', '<ExcThread(monitor, started 22836157888256)>']
[2026-05-03 13:44:00] 2026-05-03 11:38:35,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 13:44:00] 2026-05-03 11:38:35,322 | INFO     | [monitor] control thread has ended
[2026-05-03 13:44:00] 2026-05-03 11:38:40,164 | INFO     | all workflow threads have been joined
[2026-05-03 13:44:00] 2026-05-03 11:38:40,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 13:44:00] 2026-05-03 11:38:40,164 | INFO     | traces error code: 0
[2026-05-03 13:44:00] 2026-05-03 11:38:40,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 13:44:00] 2026-05-03 11:38:40,339 [wrapper] ==== pilot stdout END ====
[2026-05-03 13:44:00] 2026-05-03 11:38:40,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 13:44:00] 2026-05-03 11:38:40,346 [wrapper] pilotpid: 327168
[2026-05-03 13:44:00] 2026-05-03 11:38:40,349 [wrapper] Pilot exit status: 0
[2026-05-03 13:44:00] 2026-05-03 11:38:40,362 [wrapper] pandaids: 7123281601
[2026-05-03 13:44:00] 2026-05-03 11:38:40,443 [wrapper] cleanup supervisor_pilot  624896 327169
[2026-05-03 13:44:00] 2026-05-03 11:38:40,446 [wrapper] Test setup, not cleaning
[2026-05-03 13:44:00] 2026-05-03 11:38:40,450 [wrapper] apfmon messages muted
[2026-05-03 13:44:00] 2026-05-03 11:38:40,453 [wrapper] ==== wrapper stdout END ====
[2026-05-03 13:44:00] 2026-05-03 11:38:40,456 [wrapper] ==== wrapper stderr END ====
[2026-05-03 13:44:00]  *** Error codes and diagnostics ***
[2026-05-03 13:44:00]     "exeErrorCode": 0,
[2026-05-03 13:44:00]     "pilotErrorCode": 0,
[2026-05-03 13:44:00]  *** Listing of results directory ***
[2026-05-03 13:44:00] total 417448
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc    683926 May  1 23:37 pilot3.tar.gz
[2026-05-03 13:44:00] -rwx------. 1 boinc boinc     36322 May  1 23:41 runpilot2-wrapper.sh
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc      5631 May  1 23:43 queuedata.json
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc       100 May  3 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 13:44:00] -rwxr-xr-x. 1 boinc boinc      7986 May  3 09:43 run_atlas
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc       105 May  3 09:43 job.xml
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc      6483 May  3 09:43 init_data.xml
[2026-05-03 13:44:00] -rw-r--r--. 2 boinc boinc 223184903 May  3 09:43 EVNT.48629115._000593.pool.root.1
[2026-05-03 13:44:00] -rw-r--r--. 2 boinc boinc     15667 May  3 09:43 start_atlas.sh
[2026-05-03 13:44:00] drwxrwx--x. 2 boinc boinc      4096 May  3 09:43 shared
[2026-05-03 13:44:00] -rw-r--r--. 2 boinc boinc    697444 May  3 09:43 input.tar.gz
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc         0 May  3 09:43 boinc_lockfile
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc      2629 May  3 09:43 pandaJob.out
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc   1003022 May  3 09:44 agis_schedconf.cvmfs.json
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc       452 May  3 09:44 workernode_map.json
[2026-05-03 13:44:00] drwx------. 5 boinc boinc      4096 May  3 09:44 pilot3
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc 196868970 May  3 13:37 HITS.49645815._027068.pool.root.1
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc       488 May  3 13:37 boinc_task_state.xml
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc      1035 May  3 13:37 memory_monitor_summary.json
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc   1508687 May  3 13:37 agis_ddmendpoints.agis.ALL.json
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc    331603 May  3 13:37 log.49645815._027068.job.log.tgz.1
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc      6428 May  3 13:37 heartbeat_new.json
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc      6319 May  3 13:37 heartbeat.json
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc        95 May  3 13:38 pilot_heartbeat.json
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc      4903 May  3 13:38 pilotlog.txt
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc   1305947 May  3 13:38 log.49645815._027068.job.log.1
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc       357 May  3 13:38 output.list
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc       410 May  3 13:38 runtime_log
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc   1658880 May  3 13:38 result.tar.gz
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc      8828 May  3 13:38 runtime_log.err
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc       665 May  3 13:38 1e076ad9e918.diag
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc        27 May  3 13:43 wrapper_checkpoint.txt
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc      8192 May  3 13:43 boinc_mmap_file
[2026-05-03 13:44:00] -rw-r--r--. 1 boinc boinc     20805 May  3 13:44 stderr.txt
[2026-05-03 13:44:00] HITS file was successfully produced:
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc 196868970 May  3 13:37 shared/HITS.pool.root.1
[2026-05-03 13:44:00]  *** Contents of shared directory: ***
[2026-05-03 13:44:00] total 412540
[2026-05-03 13:44:00] -rw-r--r--. 2 boinc boinc 223184903 May  3 09:43 ATLAS.root_0
[2026-05-03 13:44:00] -rw-r--r--. 2 boinc boinc     15667 May  3 09:43 start_atlas.sh
[2026-05-03 13:44:00] -rw-r--r--. 2 boinc boinc    697444 May  3 09:43 input.tar.gz
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc 196868970 May  3 13:37 HITS.pool.root.1
[2026-05-03 13:44:00] -rw-------. 1 boinc boinc   1658880 May  3 13:38 result.tar.gz
13:44:02 (323304): run_atlas exited; CPU time 54154.169906
13:44:02 (323304): called boinc_finish(0)

</stderr_txt>
]]>

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