Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:11 (25248): wrapper (7.7.26015): starting
09:41:11 (25248): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 09:41:11] Arguments: --nthreads 8
[2026-05-02 09:41:11] Threads: 8
[2026-05-02 09:41:11] Checking for CVMFS
[2026-05-02 09:41:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 09:41:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 09:41:15] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 09:41:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 09:41:16] 2.11.2.0 2888 23917 101272 159123 2 53 13731797 25165825 96 130560 0 72116665 99.982 9443179 5942 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 09:41:16] CVMFS is ok
[2026-05-02 09:41:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 09:41:16] Checking for apptainer binary...
[2026-05-02 09:41:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 09:41:16] Running /usr/bin/apptainer --version
[2026-05-02 09:41:17] apptainer version 1.3.2-1.el7
[2026-05-02 09:41:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 09:41:22] cg-vwn421.simple-grid.lan
[2026-05-02 09:41:22] apptainer works
[2026-05-02 09:41:22] Set ATHENA_PROC_NUMBER=8
[2026-05-02 09:41:22] Set ATHENA_CORE_NUMBER=8
[2026-05-02 09:41:22] Starting ATLAS job with PandaID=7122773132
[2026-05-02 09:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 15:07:33]  *** The last 200 lines of the pilot log: ***
[2026-05-02 15:07:33] 2026-05-02 13:06:27,619 | INFO     | this job has now completed (state=finished)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,619 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,619 | INFO     | log transfer has been attempted: DONE
[2026-05-02 15:07:33] 2026-05-02 13:06:27,620 | INFO     | job 7122773132 has finished - writing final server update
[2026-05-02 15:07:33] 2026-05-02 13:06:27,620 | INFO     | total number of processed events: 400 (read)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,622 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-7122773132/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,622 | INFO     | extracted standard info from prmon json
[2026-05-02 15:07:33] 2026-05-02 13:06:27,623 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 15:07:33] 2026-05-02 13:06:27,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 15:07:33] 2026-05-02 13:06:27,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 15:07:33] 2026-05-02 13:06:27,629 | INFO     | fitting pss+swap vs Time
[2026-05-02 15:07:33] 2026-05-02 13:06:27,630 | INFO     | sum of square deviations: 8884603792.5
[2026-05-02 15:07:33] 2026-05-02 13:06:27,633 | INFO     | sum of deviations: 145184493412.5
[2026-05-02 15:07:33] 2026-05-02 13:06:27,633 | INFO     | mean x (centered): 0.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,633 | INFO     | mean y: 2437924.7418300654
[2026-05-02 15:07:33] 2026-05-02 13:06:27,633 | INFO     | intersect: 2437924.7418300654
[2026-05-02 15:07:33] 2026-05-02 13:06:27,634 | INFO     | chi2: 7.43363458116429
[2026-05-02 15:07:33] 2026-05-02 13:06:27,634 | INFO     | sum of square deviations: 8456158550.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,641 | INFO     | sum of deviations: 162727437937.00003
[2026-05-02 15:07:33] 2026-05-02 13:06:27,642 | INFO     | mean x (centered): 0.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,642 | INFO     | mean y: 2444073.096345515
[2026-05-02 15:07:33] 2026-05-02 13:06:27,642 | INFO     | intersect: 2444073.096345515
[2026-05-02 15:07:33] 2026-05-02 13:06:27,642 | INFO     | chi2: 6.710785339712125
[2026-05-02 15:07:33] 2026-05-02 13:06:27,642 | INFO     | current chi2=6.710785339712125 (change=9.724035174983662 %)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,643 | INFO     | right removable region: 300
[2026-05-02 15:07:33] 2026-05-02 13:06:27,643 | INFO     | sum of square deviations: 8456158550.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,646 | INFO     | sum of deviations: 36107409506.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,646 | INFO     | mean x (centered): 0.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,646 | INFO     | mean y: 2476735.2757475083
[2026-05-02 15:07:33] 2026-05-02 13:06:27,646 | INFO     | intersect: 2476735.2757475083
[2026-05-02 15:07:33] 2026-05-02 13:06:27,647 | INFO     | chi2: 2.414421842082267
[2026-05-02 15:07:33] 2026-05-02 13:06:27,647 | INFO     | current chi2=2.414421842082267 (change=67.52030496360356 %)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,648 | INFO     | sum of square deviations: 8041713570.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,650 | INFO     | sum of deviations: -21156678372.999996
[2026-05-02 15:07:33] 2026-05-02 13:06:27,651 | INFO     | mean x (centered): 0.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,651 | INFO     | mean y: 2497723.2364864866
[2026-05-02 15:07:33] 2026-05-02 13:06:27,651 | INFO     | intersect: 2497723.2364864866
[2026-05-02 15:07:33] 2026-05-02 13:06:27,651 | INFO     | chi2: 0.8734064195787975
[2026-05-02 15:07:33] 2026-05-02 13:06:27,651 | INFO     | current chi2=0.8734064195787975 (change=63.82544241624542 %)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,652 | INFO     | sum of square deviations: 7641036290.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,655 | INFO     | sum of deviations: -21357980508.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,655 | INFO     | mean x (centered): 0.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,655 | INFO     | mean y: 2497770.5738831614
[2026-05-02 15:07:33] 2026-05-02 13:06:27,655 | INFO     | intersect: 2497770.5738831614
[2026-05-02 15:07:33] 2026-05-02 13:06:27,656 | INFO     | chi2: 0.8458645450210751
[2026-05-02 15:07:33] 2026-05-02 13:06:27,656 | INFO     | current chi2=0.8458645450210751 (change=3.1533858625637916 %)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,656 | INFO     | left removable region: 15
[2026-05-02 15:07:33] 2026-05-02 13:06:27,656 | INFO     | sum of square deviations: 7178069470.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,659 | INFO     | sum of deviations: -2061793412.0000002
[2026-05-02 15:07:33] 2026-05-02 13:06:27,659 | INFO     | mean x (centered): 0.0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,659 | INFO     | mean y: 2505265.168421053
[2026-05-02 15:07:33] 2026-05-02 13:06:27,659 | INFO     | intersect: 2505265.168421053
[2026-05-02 15:07:33] 2026-05-02 13:06:27,660 | INFO     | chi2: 0.057940604100577185
[2026-05-02 15:07:33] 2026-05-02 13:06:27,660 | INFO     | current memory leak: -0.29 B/s (using 285 data points, chi2=0.06)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,661 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,661 | INFO     | ..............................
[2026-05-02 15:07:33] 2026-05-02 13:06:27,661 | INFO     | . Timing measurements:
[2026-05-02 15:07:33] 2026-05-02 13:06:27,661 | INFO     | . get job = 0 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,661 | INFO     | . initial setup = 125 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,661 | INFO     | . payload setup = 333 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,662 | INFO     | . stage-in = 0 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,662 | INFO     | . payload execution = 18761 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,662 | INFO     | . stage-out = 3 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,662 | INFO     | . log creation = 1 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,662 | INFO     | ..............................
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | 
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | job summary report
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | --------------------------------------------------
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | PanDA job id: 7122773132
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | task id: 49645815
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | errors: (none)
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 15:07:33] 2026-05-02 13:06:27,772 | INFO     | pilot state: finished 
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | transexitcode: 0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | exeerrorcode: 0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | exeerrordiag: 
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | exitcode: 0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | exitmsg: OK
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | cpuconsumptiontime: 72020 s
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | nevents: 400
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | neventsw: 0
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | pid: 1290
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | pgrp: 1290
[2026-05-02 15:07:33] 2026-05-02 13:06:27,773 | INFO     | corecount: 8
[2026-05-02 15:07:33] 2026-05-02 13:06:27,774 | INFO     | event service: False
[2026-05-02 15:07:33] 2026-05-02 13:06:27,774 | INFO     | sizes: {0: 2274698, 1: 2275384, 2: 2277213, 13: 2277213, 19098: 2309967, 19103: 2319151, 19106: 2319289}
[2026-05-02 15:07:33] 2026-05-02 13:06:27,774 | INFO     | --------------------------------------------------
[2026-05-02 15:07:33] 2026-05-02 13:06:27,774 | INFO     | 
[2026-05-02 15:07:33] 2026-05-02 13:06:27,774 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-05-02 15:07:33] 2026-05-02 13:06:28,291 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,291 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 15:07:33] 2026-05-02 13:06:28,293 | INFO     | job 7122773132 has completed (purged errors)
[2026-05-02 15:07:33] 2026-05-02 13:06:28,294 | INFO     | overall cleanup function is called
[2026-05-02 15:07:33] 2026-05-02 13:06:29,306 | INFO     | --- collectZombieJob: --- 10, [1290]
[2026-05-02 15:07:33] 2026-05-02 13:06:29,306 | INFO     | zombie collector waiting for pid 1290
[2026-05-02 15:07:33] 2026-05-02 13:06:29,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 15:07:33] 2026-05-02 13:06:29,306 | INFO     | collected zombie processes
[2026-05-02 15:07:33] 2026-05-02 13:06:29,306 | INFO     | will attempt to kill all subprocesses of pid=1290
[2026-05-02 15:07:33] 2026-05-02 13:06:29,354 | INFO     | process IDs to be killed: [1290] (in reverse order)
[2026-05-02 15:07:33] 2026-05-02 13:06:30,207 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 15:07:33] 2026-05-02 13:06:30,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 15:07:33] 2026-05-02 13:06:30,210 | INFO     | did not find any defunct processes belonging to 1290
[2026-05-02 15:07:33] 2026-05-02 13:06:30,211 | INFO     | did not find any defunct processes belonging to 1290
[2026-05-02 15:07:33] 2026-05-02 13:06:30,212 | INFO     | Ready for new job
[2026-05-02 15:07:33] 2026-05-02 13:06:30,213 | INFO     | ***************************************
[2026-05-02 15:07:33] 2026-05-02 13:06:30,214 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 15:07:33] 2026-05-02 13:06:30,214 | INFO     | ***************************************
[2026-05-02 15:07:33] 2026-05-02 13:06:30,214 | INFO     | 
[2026-05-02 15:07:33] 2026-05-02 13:06:30,215 | INFO     | pilot is running in a VM
[2026-05-02 15:07:33] 2026-05-02 13:06:30,215 | INFO     | architecture information:
[2026-05-02 15:07:33] 2026-05-02 13:06:30,215 | INFO     | executing command: cat /etc/os-release
[2026-05-02 15:07:33] 2026-05-02 13:06:30,559 | INFO     | cat /etc/os-release:
[2026-05-02 15:07:33] NAME="CentOS Linux"
[2026-05-02 15:07:33] VERSION="7 (Core)"
[2026-05-02 15:07:33] ID="centos"
[2026-05-02 15:07:33] ID_LIKE="rhel fedora"
[2026-05-02 15:07:33] VERSION_ID="7"
[2026-05-02 15:07:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 15:07:33] ANSI_COLOR="0;31"
[2026-05-02 15:07:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 15:07:33] HOME_URL="https://www.centos.org/"
[2026-05-02 15:07:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 15:07:33] 
[2026-05-02 15:07:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 15:07:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 15:07:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 15:07:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 15:07:33] 
[2026-05-02 15:07:33] 2026-05-02 13:06:30,559 | INFO     | ***************************************
[2026-05-02 15:07:33] 2026-05-02 13:06:31,063 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-05-02 15:07:33] 2026-05-02 13:06:31,296 | INFO     | sufficient remaining disk space (495903047680 B)
[2026-05-02 15:07:33] 2026-05-02 13:06:31,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 15:07:33] 2026-05-02 13:06:31,297 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 15:07:33] 2026-05-02 13:06:31,297 | INFO     | update_server=False
[2026-05-02 15:07:33] 2026-05-02 13:06:31,297 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 15:07:33] 2026-05-02 13:06:31,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 15:07:33] 2026-05-02 13:06:31,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 15:07:33] 2026-05-02 13:06:31,458 | INFO     | all payload control threads have been joined
[2026-05-02 15:07:33] 2026-05-02 13:06:31,659 | INFO     | all job control threads have been joined
[2026-05-02 15:07:33] 2026-05-02 13:06:31,937 | INFO     | all data control threads have been joined
[2026-05-02 15:07:33] 2026-05-02 13:06:31,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 15:07:33] 2026-05-02 13:06:31,963 | INFO     | aborting loop
[2026-05-02 15:07:33] 2026-05-02 13:06:32,303 | INFO     | [job] retrieve thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,464 | INFO     | [payload] control thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,665 | INFO     | [job] control thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,711 | INFO     | [job] validate thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 15:07:33] 2026-05-02 13:06:32,799 | INFO     | [payload] validate_post thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,800 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,878 | INFO     | [data] copytool_in thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,938 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,943 | INFO     | [data] control thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:32,969 | INFO     | [job] job monitor thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:33,306 | INFO     | [data] copytool_out thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:33,492 | INFO     | [payload] failed_post thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:33,508 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:33,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:33,793 | INFO     | [job] queue monitor thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:06:35,306 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 15:07:33] 2026-05-02 13:07:00,665 | INFO     | PID=29221 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 15:07:33] 2026-05-02 13:07:00,665 | INFO     | .. there are 2 such processes running
[2026-05-02 15:07:33] 2026-05-02 13:07:00,665 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 15:07:33] 2026-05-02 13:07:00,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 15:07:33] 2026-05-02 13:07:00,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 15:07:33] 2026-05-02 13:07:21,809 | INFO     | [monitor] cgroup control has ended
[2026-05-02 15:07:33] 2026-05-02 13:07:23,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830692837184)>', '<ExcThread(monitor, started 139830402983680)>']
[2026-05-02 15:07:33] 2026-05-02 13:07:23,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 15:07:33] 2026-05-02 13:07:23,804 | INFO     | [monitor] control thread has ended
[2026-05-02 15:07:33] 2026-05-02 13:07:28,176 | INFO     | all workflow threads have been joined
[2026-05-02 15:07:33] 2026-05-02 13:07:28,176 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 15:07:33] 2026-05-02 13:07:28,176 | INFO     | traces error code: 0
[2026-05-02 15:07:33] 2026-05-02 13:07:28,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 15:07:33] 2026-05-02 13:07:28,693 [wrapper] ==== pilot stdout END ====
[2026-05-02 15:07:33] 2026-05-02 13:07:28,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 15:07:33] 2026-05-02 13:07:28,875 [wrapper] pilotpid: 29221
[2026-05-02 15:07:33] 2026-05-02 13:07:28,926 [wrapper] Pilot exit status: 0
[2026-05-02 15:07:33] 2026-05-02 13:07:29,414 [wrapper] pandaids: 7122773132
[2026-05-02 15:07:33] 2026-05-02 13:07:30,419 [wrapper] cleanup supervisor_pilot  9017 29222
[2026-05-02 15:07:33] 2026-05-02 13:07:30,514 [wrapper] Test setup, not cleaning
[2026-05-02 15:07:33] 2026-05-02 13:07:30,626 [wrapper] apfmon messages muted
[2026-05-02 15:07:33] 2026-05-02 13:07:30,682 [wrapper] ==== wrapper stdout END ====
[2026-05-02 15:07:33] 2026-05-02 13:07:30,734 [wrapper] ==== wrapper stderr END ====
[2026-05-02 15:07:33]  *** Error codes and diagnostics ***
[2026-05-02 15:07:33]     "exeErrorCode": 0,
[2026-05-02 15:07:33]     "pilotErrorCode": 0,
[2026-05-02 15:07:33]  *** Listing of results directory ***
[2026-05-02 15:07:33] total 418308
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-02 15:07:33] -rwx------. 1 boinc boinc     36322 May  1 22:30 runpilot2-wrapper.sh
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc      5631 May  1 22:30 queuedata.json
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc       100 May  2 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 15:07:33] -rwxr-xr-x. 1 boinc boinc      7986 May  2 09:41 run_atlas
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc       105 May  2 09:41 job.xml
[2026-05-02 15:07:33] -rw-r--r--. 2 boinc boinc 222641421 May  2 09:41 EVNT.48629115._000544.pool.root.1
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc      6307 May  2 09:41 init_data.xml
[2026-05-02 15:07:33] -rw-r--r--. 2 boinc boinc     15667 May  2 09:41 start_atlas.sh
[2026-05-02 15:07:33] drwxrwx--x. 2 boinc boinc        68 May  2 09:41 shared
[2026-05-02 15:07:33] -rw-r--r--. 2 boinc boinc    697441 May  2 09:41 input.tar.gz
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc         0 May  2 09:41 boinc_lockfile
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc      2629 May  2 09:41 pandaJob.out
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc       415 May  2 09:47 workernode_map.json
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc   1002952 May  2 09:47 agis_schedconf.cvmfs.json
[2026-05-02 15:07:33] drwx------. 5 boinc boinc      4096 May  2 09:47 pilot3
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc 197172419 May  2 15:05 HITS.49645815._026040.pool.root.1
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc       488 May  2 15:05 boinc_task_state.xml
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc      1011 May  2 15:06 memory_monitor_summary.json
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc   1508687 May  2 15:06 agis_ddmendpoints.agis.ALL.json
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc    437544 May  2 15:06 log.49645815._026040.job.log.tgz.1
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc      6335 May  2 15:06 heartbeat_new.json
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc      6226 May  2 15:06 heartbeat.json
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc        95 May  2 15:06 pilot_heartbeat.json
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc      8192 May  2 15:07 boinc_mmap_file
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc        28 May  2 15:07 wrapper_checkpoint.txt
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc      4884 May  2 15:07 pilotlog.txt
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc   1771773 May  2 15:07 log.49645815._026040.job.log.1
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc       357 May  2 15:07 output.list
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc       410 May  2 15:07 runtime_log
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc   2222080 May  2 15:07 result.tar.gz
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc      8455 May  2 15:07 runtime_log.err
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc       655 May  2 15:07 0d5fe537e249.diag
[2026-05-02 15:07:33] -rw-r--r--. 1 boinc boinc     20619 May  2 15:07 stderr.txt
[2026-05-02 15:07:33] HITS file was successfully produced:
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc 197172419 May  2 15:05 shared/HITS.pool.root.1
[2026-05-02 15:07:33]  *** Contents of shared directory: ***
[2026-05-02 15:07:33] total 412848
[2026-05-02 15:07:33] -rw-r--r--. 2 boinc boinc 222641421 May  2 09:41 ATLAS.root_0
[2026-05-02 15:07:33] -rw-r--r--. 2 boinc boinc     15667 May  2 09:41 start_atlas.sh
[2026-05-02 15:07:33] -rw-r--r--. 2 boinc boinc    697441 May  2 09:41 input.tar.gz
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc 197172419 May  2 15:05 HITS.pool.root.1
[2026-05-02 15:07:33] -rw-------. 1 boinc boinc   2222080 May  2 15:07 result.tar.gz
15:07:35 (25248): run_atlas exited; CPU time 72193.619581
15:07:35 (25248): called boinc_finish(0)

</stderr_txt>
]]>

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