Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:50:51 (2093489): wrapper (7.7.26015): starting
23:50:51 (2093489): wrapper: running run_atlas (--nthreads 12)
[2026-05-03 23:50:51] Arguments: --nthreads 12
[2026-05-03 23:50:51] Threads: 12
[2026-05-03 23:50:51] Checking for CVMFS
[2026-05-03 23:50:51] No cvmfs_config command found, will try listing directly
[2026-05-03 23:50:51] CVMFS is ok
[2026-05-03 23:50:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 23:50:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 23:50:51] Further information can be found at the LHC@home message board.
[2026-05-03 23:50:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 23:50:51] Checking for apptainer binary...
[2026-05-03 23:50:51] which: no apptainer in ((null))
[2026-05-03 23:50:51] apptainer is not installed, using version from CVMFS
[2026-05-03 23:50:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 23:50:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/27/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-05-03 23:50:51] apptainer works
[2026-05-03 23:50:51] Set ATHENA_PROC_NUMBER=12
[2026-05-03 23:50:51] Set ATHENA_CORE_NUMBER=12
[2026-05-03 23:50:51] Starting ATLAS job with PandaID=7122780355
[2026-05-03 23:50:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 00:20:07]  *** The last 200 lines of the pilot log: ***
[2026-05-04 00:20:07]  filetype=log
[2026-05-04 00:20:07]  guid=d616f62f-5492-4a92-8b6e-d0e0ee8711c2
[2026-05-04 00:20:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-04 00:20:07]  is_altstaged=None
[2026-05-04 00:20:07]  is_tar=False
[2026-05-04 00:20:07]  lfn=log.49645815._026190.job.log.tgz.1
[2026-05-04 00:20:07]  mtime=0
[2026-05-04 00:20:07]  protocol_id=None
[2026-05-04 00:20:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-04 00:20:07]  replicas=None
[2026-05-04 00:20:07]  scope=mc23_13p6TeV
[2026-05-04 00:20:07]  status=None
[2026-05-04 00:20:07]  status_code=0
[2026-05-04 00:20:07]  storage_token=
[2026-05-04 00:20:07]  surl=/var/lib/boinc/var/slot60/slots/27/PanDA_Pilot-7122780355/log.49645815._026190.job.log.tgz.1
[2026-05-04 00:20:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/81/log.49645815._026190.job.log.tgz.1
[2026-05-04 00:20:07]  workdir=None
[2026-05-04 00:20:07] ]
[2026-05-04 00:20:07] 2026-05-03 22:19:12,960 | INFO     | transferring file log.49645815._026190.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/27/PanDA_Pilot-7122780355/log.49645815._026190.job.log.tgz.1 to /var/lib/
[2026-05-04 00:20:07] 2026-05-03 22:19:12,960 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/27/PanDA_Pilot-7122780355/log.49645815._026190.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/27/
[2026-05-04 00:20:07] 2026-05-03 22:19:12,972 | INFO     | adding to output.list: log.49645815._026190.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/81/log.49645815._026190.job.log.tg
[2026-05-04 00:20:07] 2026-05-03 22:19:12,972 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-04 00:20:07] 2026-05-03 22:19:12,972 | INFO     | summary of transferred files:
[2026-05-04 00:20:07] 2026-05-03 22:19:12,972 | INFO     |  -- lfn=log.49645815._026190.job.log.tgz.1, status_code=0, status=transferred
[2026-05-04 00:20:07] 2026-05-03 22:19:12,972 | INFO     | stage-out finished correctly
[2026-05-04 00:20:07] 2026-05-03 22:19:13,324 | INFO     | monitor loop #131: job 0:7122780355 is in state 'finished'
[2026-05-04 00:20:07] 2026-05-03 22:19:13,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 00:20:07] 2026-05-03 22:19:14,734 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 00:20:07] 2026-05-03 22:19:15,827 | INFO     | monitor loop #132: job 0:7122780355 is in state 'finished'
[2026-05-04 00:20:07] 2026-05-03 22:19:15,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,077 | INFO     | job 7122780355 has state=finished
[2026-05-04 00:20:07] 2026-05-03 22:19:16,077 | INFO     | preparing for final server update for job 7122780355 in state='finished'
[2026-05-04 00:20:07] 2026-05-03 22:19:16,077 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/27/PanDA_Pilot-7122780355/jobReport.json
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/27/workernode_map.json
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | INFO     | this job has now completed (state=finished)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | INFO     | log transfer has been attempted: DONE
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | INFO     | job 7122780355 has finished - writing final server update
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1321124/.job.ad'
[2026-05-04 00:20:07] 2026-05-03 22:19:16,079 | INFO     | total number of processed events: 400 (read)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,095 | INFO     | using path: /var/lib/boinc/var/slot60/slots/27/PanDA_Pilot-7122780355/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,096 | INFO     | extracted standard info from prmon json
[2026-05-04 00:20:07] 2026-05-03 22:19:16,096 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 00:20:07] 2026-05-03 22:19:16,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 00:20:07] 2026-05-03 22:19:16,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | fitting pss+swap vs Time
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | sum of square deviations: 2865170.0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | sum of deviations: -155946500.0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | mean x (centered): 0.0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | mean y: 2722782.714285714
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | intersect: 2722782.714285714
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | chi2: 0.001427983099481755
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | current memory leak: -54.43 B/s (using 21 data points, chi2=0.00)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,097 | INFO     | could have reported an average CPU frequency of 3635 MHz (4 samples)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | ..............................
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . Timing measurements:
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . get job = 0 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . initial setup = 3 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . payload setup = 5 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . stage-in = 0 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . payload execution = 1672 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . stage-out = 0 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | . log creation = 0 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,098 | INFO     | ..............................
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | 
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | job summary report
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | --------------------------------------------------
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | PanDA job id: 7122780355
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | task id: 49645815
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | errors: (none)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | pilot state: finished 
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | transexitcode: 0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,172 | INFO     | exeerrorcode: 0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | exeerrordiag: 
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | exitcode: 0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | exitmsg: OK
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | cpuconsumptiontime: 18039 s
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | nevents: 400
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | neventsw: 0
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | pid: 2103859
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | pgrp: 2103859
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | corecount: 12
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | event service: False
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | sizes: {0: 2275538, 1: 2277168, 11: 2277196, 1682: 2302062, 1683: 2311084, 1684: 2311140, 1686: 2311462}
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | --------------------------------------------------
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | 
[2026-05-04 00:20:07] 2026-05-03 22:19:16,173 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/27
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 00:20:07] 2026-05-03 22:19:16,190 | INFO     | job 7122780355 has completed (purged errors)
[2026-05-04 00:20:07] 2026-05-03 22:19:16,191 | INFO     | overall cleanup function is called
[2026-05-04 00:20:07] 2026-05-03 22:19:17,198 | INFO     | --- collectZombieJob: --- 10, [2103859]
[2026-05-04 00:20:07] 2026-05-03 22:19:17,198 | INFO     | zombie collector waiting for pid 2103859
[2026-05-04 00:20:07] 2026-05-03 22:19:17,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 00:20:07] 2026-05-03 22:19:17,198 | INFO     | collected zombie processes
[2026-05-04 00:20:07] 2026-05-03 22:19:17,198 | INFO     | will attempt to kill all subprocesses of pid=2103859
[2026-05-04 00:20:07] 2026-05-03 22:19:17,381 | INFO     | process IDs to be killed: [2103859] (in reverse order)
[2026-05-04 00:20:07] 2026-05-03 22:19:17,488 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 00:20:07] 2026-05-03 22:19:17,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 00:20:07] 2026-05-03 22:19:17,511 | INFO     | did not find any defunct processes belonging to 2103859
[2026-05-04 00:20:07] 2026-05-03 22:19:17,528 | INFO     | did not find any defunct processes belonging to 2103859
[2026-05-04 00:20:07] 2026-05-03 22:19:17,528 | INFO     | Ready for new job
[2026-05-04 00:20:07] 2026-05-03 22:19:17,529 | INFO     | ***************************************
[2026-05-04 00:20:07] 2026-05-03 22:19:17,529 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 00:20:07] 2026-05-03 22:19:17,529 | INFO     | ***************************************
[2026-05-04 00:20:07] 2026-05-03 22:19:17,529 | INFO     | 
[2026-05-04 00:20:07] 2026-05-03 22:19:17,533 | INFO     | architecture information:
[2026-05-04 00:20:07] 2026-05-03 22:19:17,533 | INFO     | executing command: cat /etc/os-release
[2026-05-04 00:20:07] 2026-05-03 22:19:17,542 | INFO     | cat /etc/os-release:
[2026-05-04 00:20:07] NAME="CentOS Linux"
[2026-05-04 00:20:07] VERSION="7 (Core)"
[2026-05-04 00:20:07] ID="centos"
[2026-05-04 00:20:07] ID_LIKE="rhel fedora"
[2026-05-04 00:20:07] VERSION_ID="7"
[2026-05-04 00:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 00:20:07] ANSI_COLOR="0;31"
[2026-05-04 00:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 00:20:07] HOME_URL="https://www.centos.org/"
[2026-05-04 00:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 00:20:07] 
[2026-05-04 00:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 00:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 00:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 00:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 00:20:07] 
[2026-05-04 00:20:07] 2026-05-03 22:19:17,542 | INFO     | ***************************************
[2026-05-04 00:20:07] 2026-05-03 22:19:18,045 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/27
[2026-05-04 00:20:07] 2026-05-03 22:19:18,059 | INFO     | sufficient remaining disk space (267375345664 B)
[2026-05-04 00:20:07] 2026-05-03 22:19:18,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 00:20:07] 2026-05-03 22:19:18,059 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 00:20:07] 2026-05-03 22:19:18,059 | INFO     | update_server=False
[2026-05-04 00:20:07] 2026-05-03 22:19:18,059 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 00:20:07] 2026-05-03 22:19:18,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 00:20:07] 2026-05-03 22:19:18,069 | INFO     | all payload control threads have been joined
[2026-05-04 00:20:07] 2026-05-03 22:19:18,092 | INFO     | all data control threads have been joined
[2026-05-04 00:20:07] 2026-05-03 22:19:18,331 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-04 00:20:07] 2026-05-03 22:19:18,331 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-04 00:20:07] 2026-05-03 22:19:18,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 00:20:07] 2026-05-03 22:19:18,331 | INFO     | will abort loop
[2026-05-04 00:20:07] 2026-05-03 22:19:18,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 00:20:07] 2026-05-03 22:19:19,063 | INFO     | [job] queue monitor thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,065 | INFO     | [job] retrieve thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,074 | INFO     | [payload] control thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,098 | INFO     | [data] control thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,261 | INFO     | [payload] validate_post thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,337 | INFO     | [job] job monitor thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,425 | INFO     | [payload] failed_post thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:19,598 | INFO     | all job control threads have been joined
[2026-05-04 00:20:07] 2026-05-03 22:19:20,182 | INFO     | [job] validate thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,295 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,319 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,335 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,408 | INFO     | [data] copytool_in thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,531 | INFO     | [data] copytool_out thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,604 | INFO     | [job] control thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:20,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 00:20:07] 2026-05-03 22:19:24,790 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 00:20:07] 2026-05-03 22:19:47,637 | INFO     | PID=2098031 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 00:20:07] 2026-05-03 22:19:47,637 | INFO     | .. there are 8 such processes running
[2026-05-04 00:20:07] 2026-05-03 22:19:47,639 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 00:20:07] 2026-05-03 22:19:47,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 00:20:07] 2026-05-03 22:19:47,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 00:20:07] 2026-05-03 22:20:01,132 | INFO     | [monitor] cgroup control has ended
[2026-05-04 00:20:07] 2026-05-03 22:20:02,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22389114509120)>', '<ExcThread(monitor, started 22388877305600)>']
[2026-05-04 00:20:07] 2026-05-03 22:20:02,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 00:20:07] 2026-05-03 22:20:02,715 | INFO     | [monitor] control thread has ended
[2026-05-04 00:20:07] 2026-05-03 22:20:07,222 | INFO     | all workflow threads have been joined
[2026-05-04 00:20:07] 2026-05-03 22:20:07,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 00:20:07] 2026-05-03 22:20:07,222 | INFO     | traces error code: 0
[2026-05-04 00:20:07] 2026-05-03 22:20:07,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 00:20:07] 2026-05-03 22:20:07,331 [wrapper] ==== pilot stdout END ====
[2026-05-04 00:20:07] 2026-05-03 22:20:07,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 00:20:07] 2026-05-03 22:20:07,335 [wrapper] pilotpid: 2098031
[2026-05-04 00:20:07] 2026-05-03 22:20:07,337 [wrapper] Pilot exit status: 0
[2026-05-04 00:20:07] 2026-05-03 22:20:07,343 [wrapper] pandaids: 7122780355
[2026-05-04 00:20:07] 2026-05-03 22:20:07,403 [wrapper] cleanup supervisor_pilot 2198253 2098032
[2026-05-04 00:20:07] 2026-05-03 22:20:07,405 [wrapper] Test setup, not cleaning
[2026-05-04 00:20:07] 2026-05-03 22:20:07,406 [wrapper] apfmon messages muted
[2026-05-04 00:20:07] 2026-05-03 22:20:07,407 [wrapper] ==== wrapper stdout END ====
[2026-05-04 00:20:07] 2026-05-03 22:20:07,409 [wrapper] ==== wrapper stderr END ====
[2026-05-04 00:20:07]  *** Error codes and diagnostics ***
[2026-05-04 00:20:07]     "exeErrorCode": 0,
[2026-05-04 00:20:07]     "pilotErrorCode": 0,
[2026-05-04 00:20:07]  *** Listing of results directory ***
[2026-05-04 00:20:07] total 422072
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-04 00:20:07] -rwx------. 1 boinc boinc     36322 May  1 22:30 runpilot2-wrapper.sh
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc      5631 May  1 22:30 queuedata.json
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc       100 May  3 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 00:20:07] -rwxr-xr-x. 1 boinc boinc      7986 May  3 23:50 run_atlas
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc       105 May  3 23:50 job.xml
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc      6629 May  3 23:50 init_data.xml
[2026-05-04 00:20:07] -rw-r--r--. 2 boinc boinc 224810525 May  3 23:50 EVNT.48629115._000547.pool.root.1
[2026-05-04 00:20:07] -rw-r--r--. 2 boinc boinc     15667 May  3 23:50 start_atlas.sh
[2026-05-04 00:20:07] drwxrwx--x. 2 boinc boinc      4096 May  3 23:50 shared
[2026-05-04 00:20:07] -rw-r--r--. 2 boinc boinc    697443 May  3 23:50 input.tar.gz
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc         0 May  3 23:50 boinc_lockfile
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc      2629 May  3 23:50 pandaJob.out
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc   1003003 May  3 23:50 agis_schedconf.cvmfs.json
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc   1508687 May  3 23:50 agis_ddmendpoints.agis.ALL.json
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc       444 May  3 23:50 workernode_map.json
[2026-05-04 00:20:07] drwx------. 5 boinc boinc      4096 May  3 23:50 pilot3
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc       487 May  4 00:18 boinc_task_state.xml
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc 202175683 May  4 00:18 HITS.49645815._026190.pool.root.1
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc      1027 May  4 00:19 memory_monitor_summary.json
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc    332144 May  4 00:19 log.49645815._026190.job.log.tgz.1
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc      6384 May  4 00:19 heartbeat_new.json
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc      6275 May  4 00:19 heartbeat.json
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc        95 May  4 00:19 pilot_heartbeat.json
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc      8192 May  4 00:20 boinc_mmap_file
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc        27 May  4 00:20 wrapper_checkpoint.txt
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc      5019 May  4 00:20 pilotlog.txt
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc    205803 May  4 00:20 log.49645815._026190.job.log.1
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc       357 May  4 00:20 output.list
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc       410 May  4 00:20 runtime_log
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc    552960 May  4 00:20 result.tar.gz
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc      8846 May  4 00:20 runtime_log.err
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc       660 May  4 00:20 0d5f9ee4b271.diag
[2026-05-04 00:20:07] -rw-r--r--. 1 boinc boinc     21128 May  4 00:20 stderr.txt
[2026-05-04 00:20:07] HITS file was successfully produced:
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc 202175683 May  4 00:18 shared/HITS.pool.root.1
[2026-05-04 00:20:07]  *** Contents of shared directory: ***
[2026-05-04 00:20:07] total 418232
[2026-05-04 00:20:07] -rw-r--r--. 2 boinc boinc 224810525 May  3 23:50 ATLAS.root_0
[2026-05-04 00:20:07] -rw-r--r--. 2 boinc boinc     15667 May  3 23:50 start_atlas.sh
[2026-05-04 00:20:07] -rw-r--r--. 2 boinc boinc    697443 May  3 23:50 input.tar.gz
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc 202175683 May  4 00:18 HITS.pool.root.1
[2026-05-04 00:20:07] -rw-------. 1 boinc boinc    552960 May  4 00:20 result.tar.gz
00:20:09 (2093489): run_atlas exited; CPU time 18075.061194
00:20:09 (2093489): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN