Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:18 (3784): wrapper (7.7.26015): starting
08:27:18 (3784): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 08:27:18] Arguments: --nthreads 8
[2026-05-02 08:27:18] Threads: 8
[2026-05-02 08:27:18] Checking for CVMFS
[2026-05-02 08:27:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 08:27:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 08:27:23] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 08:27:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 08:27:25] 2.11.2.0 8583 23843 99180 159122 1 105 18997839 25165825 540 130560 0 9101495 99.920 2634654 3007 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 08:27:25] CVMFS is ok
[2026-05-02 08:27:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 08:27:25] Checking for apptainer binary...
[2026-05-02 08:27:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 08:27:25] Running /usr/bin/apptainer --version
[2026-05-02 08:27:25] apptainer version 1.3.2-1.el7
[2026-05-02 08:27:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 08:27:39] cg-vwn390.simple-grid.lan
[2026-05-02 08:27:39] apptainer works
[2026-05-02 08:27:39] Set ATHENA_PROC_NUMBER=8
[2026-05-02 08:27:39] Set ATHENA_CORE_NUMBER=8
[2026-05-02 08:27:39] Starting ATLAS job with PandaID=7125348771
[2026-05-02 08:27:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 11:16:09]  *** The last 200 lines of the pilot log: ***
[2026-05-02 11:16:09] 2026-05-02 09:15:31,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 11:16:09] 2026-05-02 09:15:31,213 | INFO     | job 7125348771 has state=finished
[2026-05-02 11:16:09] 2026-05-02 09:15:31,214 | INFO     | preparing for final server update for job 7125348771 in state='finished'
[2026-05-02 11:16:09] 2026-05-02 09:15:31,214 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-7125348771/jobReport.json
[2026-05-02 11:16:09] 2026-05-02 09:15:31,217 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-05-02 11:16:09] 2026-05-02 09:15:31,217 | INFO     | this job has now completed (state=finished)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,219 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,219 | INFO     | log transfer has been attempted: DONE
[2026-05-02 11:16:09] 2026-05-02 09:15:31,219 | INFO     | job 7125348771 has finished - writing final server update
[2026-05-02 11:16:09] 2026-05-02 09:15:31,219 | INFO     | total number of processed events: 400 (read)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,221 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7125348771/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,222 | INFO     | extracted standard info from prmon json
[2026-05-02 11:16:09] 2026-05-02 09:15:31,222 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 11:16:09] 2026-05-02 09:15:31,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 11:16:09] 2026-05-02 09:15:31,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 11:16:09] 2026-05-02 09:15:31,226 | INFO     | fitting pss+swap vs Time
[2026-05-02 11:16:09] 2026-05-02 09:15:31,226 | INFO     | sum of square deviations: 1132458442.5
[2026-05-02 11:16:09] 2026-05-02 09:15:31,227 | INFO     | sum of deviations: 24270061673.500027
[2026-05-02 11:16:09] 2026-05-02 09:15:31,227 | INFO     | mean x (centered): 0.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,228 | INFO     | mean y: 2488903.0584415584
[2026-05-02 11:16:09] 2026-05-02 09:15:31,228 | INFO     | intersect: 2488903.0584415584
[2026-05-02 11:16:09] 2026-05-02 09:15:31,228 | INFO     | chi2: 5.4141471195513775
[2026-05-02 11:16:09] 2026-05-02 09:15:31,228 | INFO     | sum of square deviations: 1025693650.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,229 | INFO     | sum of deviations: 33861080968.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,229 | INFO     | mean x (centered): 0.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,230 | INFO     | mean y: 2502214.912751678
[2026-05-02 11:16:09] 2026-05-02 09:15:31,230 | INFO     | intersect: 2502214.912751678
[2026-05-02 11:16:09] 2026-05-02 09:15:31,230 | INFO     | chi2: 4.708872677241763
[2026-05-02 11:16:09] 2026-05-02 09:15:31,230 | INFO     | current chi2=4.708872677241763 (change=13.026510486993468 %)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,230 | INFO     | right removable region: 148
[2026-05-02 11:16:09] 2026-05-02 09:15:31,231 | INFO     | sum of square deviations: 1025693650.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,231 | INFO     | sum of deviations: -26220764234.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,232 | INFO     | mean x (centered): 0.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,232 | INFO     | mean y: 2560849.409395973
[2026-05-02 11:16:09] 2026-05-02 09:15:31,232 | INFO     | intersect: 2560849.409395973
[2026-05-02 11:16:09] 2026-05-02 09:15:31,232 | INFO     | chi2: 1.1651876214713026
[2026-05-02 11:16:09] 2026-05-02 09:15:31,232 | INFO     | current chi2=1.1651876214713026 (change=78.47883340178146 %)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,233 | INFO     | sum of square deviations: 925859220.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,233 | INFO     | sum of deviations: -35319233294.5
[2026-05-02 11:16:09] 2026-05-02 09:15:31,234 | INFO     | mean x (centered): 0.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,234 | INFO     | mean y: 2574588.0625
[2026-05-02 11:16:09] 2026-05-02 09:15:31,234 | INFO     | intersect: 2574588.0625
[2026-05-02 11:16:09] 2026-05-02 09:15:31,234 | INFO     | chi2: 0.9288888765947689
[2026-05-02 11:16:09] 2026-05-02 09:15:31,234 | INFO     | current chi2=0.9288888765947689 (change=20.27988802165227 %)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,234 | INFO     | left removable region: 10
[2026-05-02 11:16:09] 2026-05-02 09:15:31,235 | INFO     | sum of square deviations: 814878534.5
[2026-05-02 11:16:09] 2026-05-02 09:15:31,236 | INFO     | sum of deviations: -24241000053.500004
[2026-05-02 11:16:09] 2026-05-02 09:15:31,236 | INFO     | mean x (centered): 0.0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,236 | INFO     | mean y: 2592299.644927536
[2026-05-02 11:16:09] 2026-05-02 09:15:31,236 | INFO     | intersect: 2592299.644927536
[2026-05-02 11:16:09] 2026-05-02 09:15:31,236 | INFO     | chi2: 0.12719918586413553
[2026-05-02 11:16:09] 2026-05-02 09:15:31,236 | INFO     | current memory leak: -29.75 B/s (using 138 data points, chi2=0.13)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,237 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,237 | INFO     | ..............................
[2026-05-02 11:16:09] 2026-05-02 09:15:31,237 | INFO     | . Timing measurements:
[2026-05-02 11:16:09] 2026-05-02 09:15:31,237 | INFO     | . get job = 0 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,237 | INFO     | . initial setup = 119 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,237 | INFO     | . payload setup = 206 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,238 | INFO     | . stage-in = 0 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,238 | INFO     | . payload execution = 9478 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,238 | INFO     | . stage-out = 0 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,238 | INFO     | . log creation = 0 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,238 | INFO     | ..............................
[2026-05-02 11:16:09] 2026-05-02 09:15:31,350 | INFO     | 
[2026-05-02 11:16:09] 2026-05-02 09:15:31,351 | INFO     | job summary report
[2026-05-02 11:16:09] 2026-05-02 09:15:31,351 | INFO     | --------------------------------------------------
[2026-05-02 11:16:09] 2026-05-02 09:15:31,351 | INFO     | PanDA job id: 7125348771
[2026-05-02 11:16:09] 2026-05-02 09:15:31,351 | INFO     | task id: 50016906
[2026-05-02 11:16:09] 2026-05-02 09:15:31,351 | INFO     | errors: (none)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | pilot state: finished 
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | transexitcode: 0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | exeerrorcode: 0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | exeerrordiag: 
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | exitcode: 0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | exitmsg: OK
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | cpuconsumptiontime: 64691 s
[2026-05-02 11:16:09] 2026-05-02 09:15:31,352 | INFO     | nevents: 400
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | neventsw: 0
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | pid: 12520
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | pgrp: 12520
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | corecount: 8
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | event service: False
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | sizes: {0: 2275210, 1: 2275667, 2: 2277123, 13: 2277123, 9687: 2305637, 9688: 2314635, 9691: 2315077}
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | --------------------------------------------------
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | 
[2026-05-02 11:16:09] 2026-05-02 09:15:31,353 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 11:16:09] 2026-05-02 09:15:31,388 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,388 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,388 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,388 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 11:16:09] 2026-05-02 09:15:31,390 | INFO     | job 7125348771 has completed (purged errors)
[2026-05-02 11:16:09] 2026-05-02 09:15:31,391 | INFO     | overall cleanup function is called
[2026-05-02 11:16:09] 2026-05-02 09:15:32,399 | INFO     | --- collectZombieJob: --- 10, [12520]
[2026-05-02 11:16:09] 2026-05-02 09:15:32,399 | INFO     | zombie collector waiting for pid 12520
[2026-05-02 11:16:09] 2026-05-02 09:15:32,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 11:16:09] 2026-05-02 09:15:32,399 | INFO     | collected zombie processes
[2026-05-02 11:16:09] 2026-05-02 09:15:32,399 | INFO     | will attempt to kill all subprocesses of pid=12520
[2026-05-02 11:16:09] 2026-05-02 09:15:32,470 | INFO     | process IDs to be killed: [12520] (in reverse order)
[2026-05-02 11:16:09] 2026-05-02 09:15:32,530 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 11:16:09] 2026-05-02 09:15:32,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 11:16:09] 2026-05-02 09:15:32,533 | INFO     | did not find any defunct processes belonging to 12520
[2026-05-02 11:16:09] 2026-05-02 09:15:32,535 | INFO     | did not find any defunct processes belonging to 12520
[2026-05-02 11:16:09] 2026-05-02 09:15:32,535 | INFO     | Ready for new job
[2026-05-02 11:16:09] 2026-05-02 09:15:32,537 | INFO     | ***************************************
[2026-05-02 11:16:09] 2026-05-02 09:15:32,537 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 11:16:09] 2026-05-02 09:15:32,537 | INFO     | ***************************************
[2026-05-02 11:16:09] 2026-05-02 09:15:32,537 | INFO     | 
[2026-05-02 11:16:09] 2026-05-02 09:15:32,538 | INFO     | pilot is running in a VM
[2026-05-02 11:16:09] 2026-05-02 09:15:32,538 | INFO     | architecture information:
[2026-05-02 11:16:09] 2026-05-02 09:15:32,539 | INFO     | executing command: cat /etc/os-release
[2026-05-02 11:16:09] 2026-05-02 09:15:32,559 | INFO     | cat /etc/os-release:
[2026-05-02 11:16:09] NAME="CentOS Linux"
[2026-05-02 11:16:09] VERSION="7 (Core)"
[2026-05-02 11:16:09] ID="centos"
[2026-05-02 11:16:09] ID_LIKE="rhel fedora"
[2026-05-02 11:16:09] VERSION_ID="7"
[2026-05-02 11:16:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 11:16:09] ANSI_COLOR="0;31"
[2026-05-02 11:16:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 11:16:09] HOME_URL="https://www.centos.org/"
[2026-05-02 11:16:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 11:16:09] 
[2026-05-02 11:16:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 11:16:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 11:16:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 11:16:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 11:16:09] 
[2026-05-02 11:16:09] 2026-05-02 09:15:32,559 | INFO     | ***************************************
[2026-05-02 11:16:09] 2026-05-02 09:15:33,062 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 11:16:09] 2026-05-02 09:15:33,102 | INFO     | sufficient remaining disk space (497296605184 B)
[2026-05-02 11:16:09] 2026-05-02 09:15:33,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 11:16:09] 2026-05-02 09:15:33,103 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 11:16:09] 2026-05-02 09:15:33,103 | INFO     | update_server=False
[2026-05-02 11:16:09] 2026-05-02 09:15:33,103 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 11:16:09] 2026-05-02 09:15:33,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 11:16:09] 2026-05-02 09:15:33,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 11:16:09] 2026-05-02 09:15:33,350 | INFO     | all data control threads have been joined
[2026-05-02 11:16:09] 2026-05-02 09:15:33,409 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 11:16:09] 2026-05-02 09:15:33,409 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 11:16:09] 2026-05-02 09:15:33,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 11:16:09] 2026-05-02 09:15:33,409 | INFO     | will abort loop
[2026-05-02 11:16:09] 2026-05-02 09:15:33,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 11:16:09] 2026-05-02 09:15:34,108 | INFO     | [job] retrieve thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,110 | INFO     | [job] queue monitor thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,234 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,263 | INFO     | all payload control threads have been joined
[2026-05-02 11:16:09] 2026-05-02 09:15:34,356 | INFO     | [data] control thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,415 | INFO     | [job] job monitor thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,433 | INFO     | all job control threads have been joined
[2026-05-02 11:16:09] 2026-05-02 09:15:34,690 | INFO     | [payload] validate_post thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,857 | INFO     | [data] copytool_in thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:34,915 | INFO     | [job] validate thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:35,198 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:35,198 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:35,266 | INFO     | [payload] failed_post thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:35,268 | INFO     | [payload] control thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:35,439 | INFO     | [job] control thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:35,867 | INFO     | [data] copytool_out thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:15:37,110 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 11:16:09] 2026-05-02 09:16:02,371 | INFO     | [monitor] cgroup control has ended
[2026-05-02 11:16:09] 2026-05-02 09:16:03,184 | INFO     | PID=7938 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 11:16:09] 2026-05-02 09:16:03,184 | INFO     | .. there are 2 such processes running
[2026-05-02 11:16:09] 2026-05-02 09:16:03,184 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 11:16:09] 2026-05-02 09:16:03,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 11:16:09] 2026-05-02 09:16:03,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 11:16:09] 2026-05-02 09:16:03,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034376120128)>', '<ExcThread(monitor, started 140034078385920)>']
[2026-05-02 11:16:09] 2026-05-02 09:16:04,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 11:16:09] 2026-05-02 09:16:04,190 | INFO     | [monitor] control thread has ended
[2026-05-02 11:16:09] 2026-05-02 09:16:08,930 | INFO     | all workflow threads have been joined
[2026-05-02 11:16:09] 2026-05-02 09:16:08,930 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 11:16:09] 2026-05-02 09:16:08,931 | INFO     | traces error code: 0
[2026-05-02 11:16:09] 2026-05-02 09:16:08,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 11:16:09] 2026-05-02 09:16:09,073 [wrapper] ==== pilot stdout END ====
[2026-05-02 11:16:09] 2026-05-02 09:16:09,078 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 11:16:09] 2026-05-02 09:16:09,082 [wrapper] pilotpid: 7938
[2026-05-02 11:16:09] 2026-05-02 09:16:09,085 [wrapper] Pilot exit status: 0
[2026-05-02 11:16:09] 2026-05-02 09:16:09,109 [wrapper] pandaids: 7125348771
[2026-05-02 11:16:09] 2026-05-02 09:16:09,143 [wrapper] cleanup supervisor_pilot 20768 7939
[2026-05-02 11:16:09] 2026-05-02 09:16:09,153 [wrapper] Test setup, not cleaning
[2026-05-02 11:16:09] 2026-05-02 09:16:09,160 [wrapper] apfmon messages muted
[2026-05-02 11:16:09] 2026-05-02 09:16:09,166 [wrapper] ==== wrapper stdout END ====
[2026-05-02 11:16:09] 2026-05-02 09:16:09,174 [wrapper] ==== wrapper stderr END ====
[2026-05-02 11:16:09]  *** Error codes and diagnostics ***
[2026-05-02 11:16:09]     "exeErrorCode": 0,
[2026-05-02 11:16:09]     "pilotErrorCode": 0,
[2026-05-02 11:16:09]  *** Listing of results directory ***
[2026-05-02 11:16:09] total 490140
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc      5631 May  1 22:27 queuedata.json
[2026-05-02 11:16:09] -rwx------. 1 boinc boinc     36322 May  1 22:29 runpilot2-wrapper.sh
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc       100 May  2 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 11:16:09] -rwxr-xr-x. 1 boinc boinc      7986 May  2 08:27 run_atlas
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc       105 May  2 08:27 job.xml
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc      6307 May  2 08:27 init_data.xml
[2026-05-02 11:16:09] -rw-r--r--. 2 boinc boinc 315986965 May  2 08:27 EVNT.50016902._000031.pool.root.1
[2026-05-02 11:16:09] -rw-r--r--. 2 boinc boinc     15667 May  2 08:27 start_atlas.sh
[2026-05-02 11:16:09] drwxrwx--x. 2 boinc boinc        68 May  2 08:27 shared
[2026-05-02 11:16:09] -rw-r--r--. 2 boinc boinc    697398 May  2 08:27 input.tar.gz
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc         0 May  2 08:27 boinc_lockfile
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc      2559 May  2 08:27 pandaJob.out
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc   1508687 May  2 08:31 agis_ddmendpoints.agis.ALL.json
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc       415 May  2 08:33 workernode_map.json
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc   1002976 May  2 08:33 agis_schedconf.cvmfs.json
[2026-05-02 11:16:09] drwx------. 5 boinc boinc      4096 May  2 08:33 pilot3
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc 179249061 May  2 11:14 HITS.50016906._000791.pool.root.1
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc       489 May  2 11:15 boinc_task_state.xml
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc        95 May  2 11:15 pilot_heartbeat.json
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc      1009 May  2 11:15 memory_monitor_summary.json
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc    350021 May  2 11:15 log.50016906._000791.job.log.tgz.1
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc      6329 May  2 11:15 heartbeat_new.json
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc      6220 May  2 11:15 heartbeat.json
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc      8192 May  2 11:16 boinc_mmap_file
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc        28 May  2 11:16 wrapper_checkpoint.txt
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc      5068 May  2 11:16 pilotlog.txt
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc    923928 May  2 11:16 log.50016906._000791.job.log.1
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc       357 May  2 11:16 output.list
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc       410 May  2 11:16 runtime_log
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc   1290240 May  2 11:16 result.tar.gz
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc      8439 May  2 11:16 runtime_log.err
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc       654 May  2 11:16 0d208b88ba3c.diag
[2026-05-02 11:16:09] -rw-r--r--. 1 boinc boinc     20814 May  2 11:16 stderr.txt
[2026-05-02 11:16:09] HITS file was successfully produced:
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc 179249061 May  2 11:14 shared/HITS.pool.root.1
[2026-05-02 11:16:09]  *** Contents of shared directory: ***
[2026-05-02 11:16:09] total 485592
[2026-05-02 11:16:09] -rw-r--r--. 2 boinc boinc 315986965 May  2 08:27 ATLAS.root_0
[2026-05-02 11:16:09] -rw-r--r--. 2 boinc boinc     15667 May  2 08:27 start_atlas.sh
[2026-05-02 11:16:09] -rw-r--r--. 2 boinc boinc    697398 May  2 08:27 input.tar.gz
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc 179249061 May  2 11:14 HITS.pool.root.1
[2026-05-02 11:16:09] -rw-------. 1 boinc boinc   1290240 May  2 11:16 result.tar.gz
11:16:11 (3784): run_atlas exited; CPU time 64776.597284
11:16:11 (3784): called boinc_finish(0)

</stderr_txt>
]]>

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