Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-02 00:11:18 (3000667): vboxwrapper version 26210
2026-05-02 00:11:18 (3000667): BOINC client version: 8.2.9
2026-05-02 00:11:18 (3000667): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-05-02 00:11:18 (3000667): Successfully copied 'init_data.xml' to the shared directory.
2026-05-02 00:11:18 (3000667): Create VM. (boinc_1a6918e6f6439704, slot#185)
2026-05-02 00:11:19 (3000667): Setting Memory Size for VM. (4300MB)
2026-05-02 00:11:19 (3000667): Setting CPU Count for VM. (3)
2026-05-02 00:11:19 (3000667): Setting Chipset Options for VM.
2026-05-02 00:11:19 (3000667): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-02 00:11:19 (3000667): Setting Boot Options for VM.
2026-05-02 00:11:19 (3000667): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-02 00:11:19 (3000667): Enabling VM Network Access.
2026-05-02 00:11:19 (3000667): Disabling USB Support for VM.
2026-05-02 00:11:19 (3000667): Disabling COM Port Support for VM.
2026-05-02 00:11:19 (3000667): Disabling LPT Port Support for VM.
2026-05-02 00:11:19 (3000667): Disabling Audio Support for VM.
2026-05-02 00:11:19 (3000667): Disabling Clipboard Support for VM.
2026-05-02 00:11:20 (3000667): Disabling Drag and Drop Support for VM.
2026-05-02 00:11:20 (3000667): Adding storage controller(s) to VM.
2026-05-02 00:11:20 (3000667): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-02 00:11:20 (3000667): Adding VirtualBox Guest Additions to VM.
2026-05-02 00:11:21 (3000667): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-02 00:11:21 (3000667): forwarding host port 45863 to guest port 80
2026-05-02 00:11:21 (3000667): Enabling remote desktop for VM.
2026-05-02 00:11:21 (3000667): Required extension pack not installed, remote desktop not enabled.
2026-05-02 00:11:21 (3000667): Enabling shared directory for VM.
2026-05-02 00:11:21 (3000667): Starting VM using VBoxManage interface. (boinc_1a6918e6f6439704, slot#185)
2026-05-02 00:11:22 (3000667): Successfully started VM. (PID = '3001285')
2026-05-02 00:11:22 (3000667): Reporting VM Process ID to BOINC.
2026-05-02 00:11:22 (3000667): Guest Log: BIOS: VirtualBox 7.1.6
2026-05-02 00:11:22 (3000667): Guest Log: CPUID EDX: 0x178bfbff
2026-05-02 00:11:22 (3000667): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-02 00:11:22 (3000667): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-02 00:11:22 (3000667): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-02 00:11:22 (3000667): Detected: Web Application Enabled (http://localhost:45863)
2026-05-02 00:11:22 (3000667): Preference change detected
2026-05-02 00:11:22 (3000667): Setting CPU throttle for VM. (50%)
2026-05-02 00:11:22 (3000667): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-02 00:11:24 (3000667): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-02 00:11:24 (3000667): Guest Log: BIOS: Booting from Hard Disk...
2026-05-02 00:11:28 (3000667): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-02 00:11:28 (3000667): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-02 00:11:28 (3000667): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-02 00:11:36 (3000667): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-02 00:11:36 (3000667): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-02 00:11:44 (3000667): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000148 main     Log opened 2026-05-02T04:11:41.922408000Z
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000219 main     OS Product: Linux
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000234 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000252 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000263 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000263 main     Process ID: 1295
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000263 main     Package type: LINUX_64BITS_GENERIC
2026-05-02 00:11:44 (3000667): Guest Log: 00:00:00.000980 main     5.2.32 r132073 started. Verbose level = 0
2026-05-02 00:11:44 (3000667): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-02 00:11:44 (3000667): Guest Log: [INFO] Mounting shared directory
2026-05-02 00:11:44 (3000667): Guest Log: [INFO] Checking for init_data.xml
2026-05-02 00:11:47 (3000667): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-02 00:11:47 (3000667): Guest Log: [INFO] Detected branch: prod
2026-05-02 00:11:47 (3000667): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-02 00:11:47 (3000667): Guest Log: Copying input files
2026-05-02 00:11:48 (3000667): Guest Log: Copied input files into RunAtlas.
2026-05-02 00:11:48 (3000667): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-02 00:11:48 (3000667): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-02 00:11:48 (3000667): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-02 00:11:48 (3000667): Guest Log: Further information can be found at the LHC@home message board.
2026-05-02 00:11:59 (3000667): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-02 00:11:59 (3000667): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-02 00:11:59 (3000667): Guest Log: 2.6.3.0 1569 0 30316 159119 4 1 3120541 4096001 0 65024 0 0 n/a 1282 391 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-02 00:11:59 (3000667): Guest Log: copied the webapp to /var/www
2026-05-02 00:11:59 (3000667): Guest Log: ATHENA_PROC_NUMBER=3
2026-05-02 00:11:59 (3000667): Guest Log: ATHENA_CORE_NUMBER=3
2026-05-02 00:12:00 (3000667): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-02 00:12:00 (3000667): Guest Log:  *** Starting ATLAS job. (PandaID=7122772509 taskID=49645815) ***
2026-05-02 01:21:36 (3000667): Preference change detected
2026-05-02 01:21:36 (3000667): Setting CPU throttle for VM. (50%)
2026-05-02 01:21:36 (3000667): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-02 01:50:23 (3000667): Status Report: Elapsed Time: '6000.000000'
2026-05-02 01:50:23 (3000667): Status Report: CPU Time: '8176.200000'
2026-05-02 03:13:45 (3000667): VM state change detected. (old = 'running', new = 'paused')
2026-05-02 07:05:13 (3000667): VM state change detected. (old = 'paused', new = 'running')
2026-05-02 07:05:20 (3000667): Guest Log: 03:02:10.739971 timesync vgsvcTimeSyncWorker: Radical host time change: 13 897 316 000 000ns (HostNow=1 777 719 919 836 000 000 ns HostLast=1 777 706 022 520 000 000 ns)
2026-05-02 07:05:29 (3000667): Guest Log: 03:02:20.769149 timesync vgsvcTimeSyncWorker: Radical guest time change: 13 897 335 989 000ns (GuestNow=1 777 719 929 931 494 000 ns GuestLast=1 777 706 032 595 505 000 ns fSetTimeLastLoop=true )
2026-05-02 07:20:51 (3000667): Status Report: Elapsed Time: '12000.000000'
2026-05-02 07:20:51 (3000667): Status Report: CPU Time: '16778.330000'
2026-05-02 08:59:52 (3000667): Status Report: Elapsed Time: '18000.000000'
2026-05-02 08:59:52 (3000667): Status Report: CPU Time: '25392.280000'
2026-05-02 09:56:13 (3000667): Guest Log:  *** Job finished ***
2026-05-02 09:56:13 (3000667): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:00,377 | INFO     | all workflow threads have been joined
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:00,377 | INFO     | end of generic workflow (traces error code: 0)
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:00,377 | INFO     | traces error code: 0
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:00,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,568 | INFO     | PID=5964 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,568 | INFO     | found 0 job(s) in 20 queues
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,569 | INFO     | [monitor] control thread has ended
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,660 [wrapper] ==== pilot stdout END ====
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,664 [wrapper] ==== wrapper stdout RESUME ====
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,667 [wrapper] pilotpid: 5964
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,670 [wrapper] Pilot exit status: 0
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,751 [wrapper] pandaids: 7122772509
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,772 [wrapper] cleanup supervisor_pilot 30926 5965
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,775 [wrapper] Test setup, not cleaning
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,781 [wrapper] apfmon messages muted
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,784 [wrapper] ==== wrapper stdout END ====
2026-05-02 09:56:13 (3000667): Guest Log: 2026-05-02 13:56:12,787 [wrapper] ==== wrapper stderr END ====
2026-05-02 09:56:13 (3000667): Guest Log:  *** Error codes and diagnostics ***
2026-05-02 09:56:13 (3000667): Guest Log:     "exeErrorCode": 0,
2026-05-02 09:56:13 (3000667): Guest Log:     "pilotErrorCode": 0,
2026-05-02 09:56:13 (3000667): Guest Log:  *** Listing of results directory ***
2026-05-02 09:56:13 (3000667): Guest Log: total 198688
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May  1 20:25 pilot3.tar.gz
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May  1 20:27 queuedata.json
2026-05-02 09:56:13 (3000667): Guest Log: -rwx------. 1 atlas atlas     36322 May  1 20:27 runpilot2-wrapper.sh
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas    697444 May  2 04:11 input.tar.gz
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas     15667 May  2 04:11 start_atlas.sh
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas      8859 May  2 04:11 init_data.xml
2026-05-02 09:56:13 (3000667): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  2 04:11 EVNT.48629115._000527.pool.root.1 -> /data/./ATLAS.root_0
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas      2629 May  2 04:11 pandaJob.out
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas   1002976 May  2 04:12 agis_schedconf.cvmfs.json
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas       408 May  2 04:12 workernode_map.json
2026-05-02 09:56:13 (3000667): Guest Log: drwx------. 5 atlas atlas      4096 May  2 04:12 pilot3
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas 194918639 May  2 13:54 HITS.49645815._025723.pool.root.1
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas        98 May  2 13:55 pilot_heartbeat.json
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas      1027 May  2 13:55 memory_monitor_summary.json
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas   1508687 May  2 13:55 agis_ddmendpoints.agis.ALL.json
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas    366718 May  2 13:55 log.49645815._025723.job.log.tgz.1
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas      6333 May  2 13:55 heartbeat_new.json
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas      6224 May  2 13:55 heartbeat.json
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas       744 May  2 13:56 pilotlog.txt
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas   1872292 May  2 13:56 log.49645815._025723.job.log.1
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas       357 May  2 13:56 output.list
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas       410 May  2 13:56 runtime_log
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas   2252800 May  2 13:56 result.tar.gz
2026-05-02 09:56:13 (3000667): Guest Log: -rw-r--r--. 1 atlas atlas      8380 May  2 13:56 runtime_log.err
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas       663 May  2 13:56 0cc62a209a92.diag
2026-05-02 09:56:13 (3000667): Guest Log: Looking for outputfile HITS.49645815._025723.pool.root.1
2026-05-02 09:56:13 (3000667): Guest Log: HITS file was successfully produced
2026-05-02 09:56:13 (3000667): Guest Log: -rw-------. 1 atlas atlas 194918639 May  2 13:54 /home/atlas/RunAtlas/HITS.49645815._025723.pool.root.1
2026-05-02 09:56:14 (3000667): Guest Log: Successfully finished the ATLAS job!
2026-05-02 09:56:14 (3000667): Guest Log: Copying the results back to the shared directory!
2026-05-02 09:56:14 (3000667): Guest Log:  *** Contents of shared directory: ***
2026-05-02 09:56:14 (3000667): Guest Log: total 220508
2026-05-02 09:56:14 (3000667): Guest Log: -rw-r--r--. 1 root root 222813726 May  2 04:11 ATLAS.root_0
2026-05-02 09:56:14 (3000667): Guest Log: -rw-r--r--. 1 root root      8859 May  2 04:11 init_data.xml
2026-05-02 09:56:14 (3000667): Guest Log: -rw-r--r--. 1 root root    697444 May  2 04:11 input.tar.gz
2026-05-02 09:56:14 (3000667): Guest Log: -rw-r--r--. 1 root root   2252800 May  2 13:56 result.tar.gz
2026-05-02 09:56:14 (3000667): Guest Log: -rw-r--r--. 1 root root     15667 May  2 04:11 start_atlas.sh
2026-05-02 09:56:14 (3000667): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-02 09:56:14 (3000667): VM Completion File Detected.
2026-05-02 09:56:14 (3000667): Powering off VM.
2026-05-02 09:56:14 (3000667): Successfully stopped VM.
2026-05-02 09:56:14 (3000667): Deregistering VM. (boinc_1a6918e6f6439704, slot#185)
2026-05-02 09:56:14 (3000667): Removing network bandwidth throttle group from VM.
2026-05-02 09:56:14 (3000667): Removing VM from VirtualBox.
2026-05-02 09:56:19 (3000667): called boinc_finish(0)

</stderr_txt>
]]>

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