Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:53:51 (1208): wrapper (7.7.26015): starting
04:53:51 (1208): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 04:53:51] Arguments: --nthreads 8
[2026-05-02 04:53:51] Threads: 8
[2026-05-02 04:53:51] Checking for CVMFS
[2026-05-02 04:53:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 04:53:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 04:53:55] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 04:53:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 04:53:56] 2.11.2.0 14708 23644 97868 159116 2 119 22542396 25165824 540 130560 0 10285991 99.843 8449277 3516 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 04:53:56] CVMFS is ok
[2026-05-02 04:53:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 04:53:56] Checking for apptainer binary...
[2026-05-02 04:53:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 04:53:56] Running /usr/bin/apptainer --version
[2026-05-02 04:53:57] apptainer version 1.3.2-1.el7
[2026-05-02 04:53:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 04:54:35] cg-vwn445.simple-grid.lan
[2026-05-02 04:54:35] apptainer works
[2026-05-02 04:54:35] Set ATHENA_PROC_NUMBER=8
[2026-05-02 04:54:35] Set ATHENA_CORE_NUMBER=8
[2026-05-02 04:54:35] Starting ATLAS job with PandaID=7122772023
[2026-05-02 04:54:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 07:57:50]  *** The last 200 lines of the pilot log: ***
[2026-05-02 07:57:50] 2026-05-02 05:56:51,366 | INFO     | monitor loop #841: job 0:7122772023 is in state 'finished'
[2026-05-02 07:57:50] 2026-05-02 05:56:51,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,122 | INFO     | job 7122772023 has state=finished
[2026-05-02 07:57:50] 2026-05-02 05:56:52,123 | INFO     | preparing for final server update for job 7122772023 in state='finished'
[2026-05-02 07:57:50] 2026-05-02 05:56:52,810 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,811 | INFO     | reading metadata from: /var/lib/boinc/slots/16/PanDA_Pilot-7122772023/jobReport.json
[2026-05-02 07:57:50] 2026-05-02 05:56:52,814 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/16/workernode_map.json
[2026-05-02 07:57:50] 2026-05-02 05:56:52,815 | INFO     | this job has now completed (state=finished)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,815 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,815 | INFO     | log transfer has been attempted: DONE
[2026-05-02 07:57:50] 2026-05-02 05:56:52,815 | INFO     | job 7122772023 has finished - writing final server update
[2026-05-02 07:57:50] 2026-05-02 05:56:52,815 | INFO     | total number of processed events: 400 (read)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,818 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7122772023/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,819 | INFO     | extracted standard info from prmon json
[2026-05-02 07:57:50] 2026-05-02 05:56:52,819 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 07:57:50] 2026-05-02 05:56:52,819 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 07:57:50] 2026-05-02 05:56:52,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 07:57:50] 2026-05-02 05:56:52,823 | INFO     | fitting pss+swap vs Time
[2026-05-02 07:57:50] 2026-05-02 05:56:52,824 | INFO     | sum of square deviations: 1496660620.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,825 | INFO     | sum of deviations: 40183820759.99999
[2026-05-02 07:57:50] 2026-05-02 05:56:52,826 | INFO     | mean x (centered): 0.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,826 | INFO     | mean y: 2437823.3609467456
[2026-05-02 07:57:50] 2026-05-02 05:56:52,826 | INFO     | intersect: 2437823.3609467456
[2026-05-02 07:57:50] 2026-05-02 05:56:52,826 | INFO     | chi2: 3.872996684933943
[2026-05-02 07:57:50] 2026-05-02 05:56:52,827 | INFO     | sum of square deviations: 1367709365.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,828 | INFO     | sum of deviations: 49878705547.5
[2026-05-02 07:57:50] 2026-05-02 05:56:52,828 | INFO     | mean x (centered): 0.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,828 | INFO     | mean y: 2448970.75
[2026-05-02 07:57:50] 2026-05-02 05:56:52,828 | INFO     | intersect: 2448970.75
[2026-05-02 07:57:50] 2026-05-02 05:56:52,829 | INFO     | chi2: 3.1266856316095457
[2026-05-02 07:57:50] 2026-05-02 05:56:52,829 | INFO     | current chi2=3.1266856316095457 (change=19.269602172074315 %)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,829 | INFO     | right removable region: 163
[2026-05-02 07:57:50] 2026-05-02 05:56:52,830 | INFO     | sum of square deviations: 1367709365.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,832 | INFO     | sum of deviations: -4904607949.000001
[2026-05-02 07:57:50] 2026-05-02 05:56:52,833 | INFO     | mean x (centered): 0.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,833 | INFO     | mean y: 2490872.93902439
[2026-05-02 07:57:50] 2026-05-02 05:56:52,833 | INFO     | intersect: 2490872.93902439
[2026-05-02 07:57:50] 2026-05-02 05:56:52,834 | INFO     | chi2: 0.8833495422595152
[2026-05-02 07:57:50] 2026-05-02 05:56:52,834 | INFO     | current chi2=0.8833495422595152 (change=77.19209144444228 %)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,834 | INFO     | sum of square deviations: 1246386160.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,835 | INFO     | sum of deviations: -9599472156.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,836 | INFO     | mean x (centered): 0.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,836 | INFO     | mean y: 2496704.257861635
[2026-05-02 07:57:50] 2026-05-02 05:56:52,836 | INFO     | intersect: 2496704.257861635
[2026-05-02 07:57:50] 2026-05-02 05:56:52,836 | INFO     | chi2: 0.8363503858543836
[2026-05-02 07:57:50] 2026-05-02 05:56:52,837 | INFO     | current chi2=0.8363503858543836 (change=5.320561584818704 %)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,837 | INFO     | left removable region: 10
[2026-05-02 07:57:50] 2026-05-02 05:56:52,837 | INFO     | sum of square deviations: 1110539892.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,838 | INFO     | sum of deviations: 933135909.9999992
[2026-05-02 07:57:50] 2026-05-02 05:56:52,838 | INFO     | mean x (centered): 0.0
[2026-05-02 07:57:50] 2026-05-02 05:56:52,838 | INFO     | mean y: 2510442.137254902
[2026-05-02 07:57:50] 2026-05-02 05:56:52,838 | INFO     | intersect: 2510442.137254902
[2026-05-02 07:57:50] 2026-05-02 05:56:52,839 | INFO     | chi2: 0.040322439146767336
[2026-05-02 07:57:50] 2026-05-02 05:56:52,839 | INFO     | current memory leak: 0.84 B/s (using 153 data points, chi2=0.04)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,839 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | ..............................
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | . Timing measurements:
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | . get job = 0 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | . initial setup = 121 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | . payload setup = 148 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | . stage-in = 0 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,840 | INFO     | . payload execution = 10414 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,841 | INFO     | . stage-out = 1 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,841 | INFO     | . log creation = 0 s
[2026-05-02 07:57:50] 2026-05-02 05:56:52,841 | INFO     | ..............................
[2026-05-02 07:57:50] 2026-05-02 05:56:53,302 | INFO     | 
[2026-05-02 07:57:50] 2026-05-02 05:56:53,302 | INFO     | job summary report
[2026-05-02 07:57:50] 2026-05-02 05:56:53,302 | INFO     | --------------------------------------------------
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | PanDA job id: 7122772023
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | task id: 49645815
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | errors: (none)
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | pilot state: finished 
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | transexitcode: 0
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | exeerrorcode: 0
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | exeerrordiag: 
[2026-05-02 07:57:50] 2026-05-02 05:56:53,303 | INFO     | exitcode: 0
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | exitmsg: OK
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | cpuconsumptiontime: 70879 s
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | nevents: 400
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | neventsw: 0
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | pid: 9900
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | pgrp: 9900
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | corecount: 8
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | event service: False
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | sizes: {0: 2274749, 1: 2275435, 2: 2277264, 13: 2277264, 10565: 2306226, 10566: 2315226, 10569: 2315410, 10573: 2315668}
[2026-05-02 07:57:50] 2026-05-02 05:56:53,304 | INFO     | --------------------------------------------------
[2026-05-02 07:57:50] 2026-05-02 05:56:53,305 | INFO     | 
[2026-05-02 07:57:50] 2026-05-02 05:56:53,305 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-05-02 07:57:50] 2026-05-02 05:56:53,352 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,352 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,354 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 07:57:50] 2026-05-02 05:56:53,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,355 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 07:57:50] 2026-05-02 05:56:53,355 | INFO     | job 7122772023 has completed (purged errors)
[2026-05-02 07:57:50] 2026-05-02 05:56:53,355 | INFO     | overall cleanup function is called
[2026-05-02 07:57:50] 2026-05-02 05:56:54,363 | INFO     | --- collectZombieJob: --- 10, [9900]
[2026-05-02 07:57:50] 2026-05-02 05:56:54,364 | INFO     | zombie collector waiting for pid 9900
[2026-05-02 07:57:50] 2026-05-02 05:56:54,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 07:57:50] 2026-05-02 05:56:54,364 | INFO     | collected zombie processes
[2026-05-02 07:57:50] 2026-05-02 05:56:54,364 | INFO     | will attempt to kill all subprocesses of pid=9900
[2026-05-02 07:57:50] 2026-05-02 05:56:54,415 | INFO     | process IDs to be killed: [9900] (in reverse order)
[2026-05-02 07:57:50] 2026-05-02 05:56:54,471 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 07:57:50] 2026-05-02 05:56:54,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 07:57:50] 2026-05-02 05:56:54,474 | INFO     | did not find any defunct processes belonging to 9900
[2026-05-02 07:57:50] 2026-05-02 05:56:54,475 | INFO     | did not find any defunct processes belonging to 9900
[2026-05-02 07:57:50] 2026-05-02 05:56:54,475 | INFO     | Ready for new job
[2026-05-02 07:57:50] 2026-05-02 05:56:54,477 | INFO     | ***************************************
[2026-05-02 07:57:50] 2026-05-02 05:56:54,477 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 07:57:50] 2026-05-02 05:56:54,478 | INFO     | ***************************************
[2026-05-02 07:57:50] 2026-05-02 05:56:54,478 | INFO     | 
[2026-05-02 07:57:50] 2026-05-02 05:56:54,478 | INFO     | pilot is running in a VM
[2026-05-02 07:57:50] 2026-05-02 05:56:54,478 | INFO     | architecture information:
[2026-05-02 07:57:50] 2026-05-02 05:56:54,479 | INFO     | executing command: cat /etc/os-release
[2026-05-02 07:57:50] 2026-05-02 05:56:54,497 | INFO     | cat /etc/os-release:
[2026-05-02 07:57:50] NAME="CentOS Linux"
[2026-05-02 07:57:50] VERSION="7 (Core)"
[2026-05-02 07:57:50] ID="centos"
[2026-05-02 07:57:50] ID_LIKE="rhel fedora"
[2026-05-02 07:57:50] VERSION_ID="7"
[2026-05-02 07:57:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 07:57:50] ANSI_COLOR="0;31"
[2026-05-02 07:57:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 07:57:50] HOME_URL="https://www.centos.org/"
[2026-05-02 07:57:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 07:57:50] 
[2026-05-02 07:57:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 07:57:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 07:57:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 07:57:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 07:57:50] 
[2026-05-02 07:57:50] 2026-05-02 05:56:54,498 | INFO     | ***************************************
[2026-05-02 07:57:50] 2026-05-02 05:56:55,001 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-05-02 07:57:50] 2026-05-02 05:56:55,023 | INFO     | sufficient remaining disk space (497356374016 B)
[2026-05-02 07:57:50] 2026-05-02 05:56:55,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 07:57:50] 2026-05-02 05:56:55,024 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 07:57:50] 2026-05-02 05:56:55,024 | INFO     | update_server=False
[2026-05-02 07:57:50] 2026-05-02 05:56:55,024 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 07:57:50] 2026-05-02 05:56:55,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 07:57:50] 2026-05-02 05:56:55,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:57:50] 2026-05-02 05:56:55,025 | INFO     | aborting loop
[2026-05-02 07:57:50] 2026-05-02 05:56:55,344 | INFO     | all data control threads have been joined
[2026-05-02 07:57:50] 2026-05-02 05:56:55,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 07:57:50] 2026-05-02 05:56:56,029 | INFO     | [job] retrieve thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,030 | INFO     | [job] job monitor thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,076 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,236 | INFO     | [payload] validate_post thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,350 | INFO     | [data] control thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,448 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,507 | INFO     | all job control threads have been joined
[2026-05-02 07:57:50] 2026-05-02 05:56:56,520 | INFO     | all payload control threads have been joined
[2026-05-02 07:57:50] 2026-05-02 05:56:56,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,572 | INFO     | [payload] failed_post thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:56,660 | INFO     | [data] copytool_in thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:57,020 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:57,028 | INFO     | [data] copytool_out thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:57,320 | INFO     | [job] validate thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:57,509 | INFO     | [job] control thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:57,525 | INFO     | [payload] control thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:57,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:57:50] 2026-05-02 05:56:58,976 | INFO     | [job] queue monitor thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:56:59,882 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 07:57:50] 2026-05-02 05:57:24,900 | INFO     | PID=5343 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 07:57:50] 2026-05-02 05:57:24,900 | INFO     | .. there are 2 such processes running
[2026-05-02 07:57:50] 2026-05-02 05:57:24,903 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 07:57:50] 2026-05-02 05:57:24,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 07:57:50] 2026-05-02 05:57:24,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 07:57:50] 2026-05-02 05:57:44,174 | INFO     | [monitor] cgroup control has ended
[2026-05-02 07:57:50] 2026-05-02 05:57:45,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840410638144)>', '<ExcThread(monitor, started 139840118191872)>']
[2026-05-02 07:57:50] 2026-05-02 05:57:46,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 07:57:50] 2026-05-02 05:57:46,008 | INFO     | [monitor] control thread has ended
[2026-05-02 07:57:50] 2026-05-02 05:57:50,180 | INFO     | all workflow threads have been joined
[2026-05-02 07:57:50] 2026-05-02 05:57:50,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 07:57:50] 2026-05-02 05:57:50,180 | INFO     | traces error code: 0
[2026-05-02 07:57:50] 2026-05-02 05:57:50,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 07:57:50] 2026-05-02 05:57:50,339 [wrapper] ==== pilot stdout END ====
[2026-05-02 07:57:50] 2026-05-02 05:57:50,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 07:57:50] 2026-05-02 05:57:50,352 [wrapper] pilotpid: 5343
[2026-05-02 07:57:50] 2026-05-02 05:57:50,356 [wrapper] Pilot exit status: 0
[2026-05-02 07:57:50] 2026-05-02 05:57:50,386 [wrapper] pandaids: 7122772023
[2026-05-02 07:57:50] 2026-05-02 05:57:50,436 [wrapper] cleanup supervisor_pilot 18742 5344
[2026-05-02 07:57:50] 2026-05-02 05:57:50,441 [wrapper] Test setup, not cleaning
[2026-05-02 07:57:50] 2026-05-02 05:57:50,453 [wrapper] apfmon messages muted
[2026-05-02 07:57:50] 2026-05-02 05:57:50,462 [wrapper] ==== wrapper stdout END ====
[2026-05-02 07:57:50] 2026-05-02 05:57:50,472 [wrapper] ==== wrapper stderr END ====
[2026-05-02 07:57:50]  *** Error codes and diagnostics ***
[2026-05-02 07:57:50]     "exeErrorCode": 0,
[2026-05-02 07:57:50]     "pilotErrorCode": 0,
[2026-05-02 07:57:50]  *** Listing of results directory ***
[2026-05-02 07:57:50] total 423712
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc      5631 May  1 22:27 queuedata.json
[2026-05-02 07:57:50] -rwx------. 1 boinc boinc     36322 May  1 22:27 runpilot2-wrapper.sh
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc       100 May  2 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 07:57:50] -rwxr-xr-x. 1 boinc boinc      7986 May  2 04:53 run_atlas
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc       105 May  2 04:53 job.xml
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc      6308 May  2 04:53 init_data.xml
[2026-05-02 07:57:50] -rw-r--r--. 2 boinc boinc 224554124 May  2 04:53 EVNT.48629115._000472.pool.root.1
[2026-05-02 07:57:50] -rw-r--r--. 2 boinc boinc     15667 May  2 04:53 start_atlas.sh
[2026-05-02 07:57:50] drwxrwx--x. 2 boinc boinc        68 May  2 04:53 shared
[2026-05-02 07:57:50] -rw-r--r--. 2 boinc boinc    697442 May  2 04:53 input.tar.gz
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc         0 May  2 04:53 boinc_lockfile
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc      2630 May  2 04:54 pandaJob.out
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc   1508687 May  2 04:58 agis_ddmendpoints.agis.ALL.json
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc       415 May  2 05:00 workernode_map.json
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc   1002984 May  2 05:00 agis_schedconf.cvmfs.json
[2026-05-02 07:57:50] drwx------. 5 boinc boinc      4096 May  2 05:00 pilot3
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc 202470424 May  2 07:56 HITS.49645815._025316.pool.root.1
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc       488 May  2 07:56 boinc_task_state.xml
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc      1024 May  2 07:56 memory_monitor_summary.json
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc    355069 May  2 07:56 log.49645815._025316.job.log.tgz.1
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc      6333 May  2 07:56 heartbeat_new.json
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc      6224 May  2 07:56 heartbeat.json
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc      8192 May  2 07:57 boinc_mmap_file
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc        28 May  2 07:57 wrapper_checkpoint.txt
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc        95 May  2 07:57 pilot_heartbeat.json
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc      4883 May  2 07:57 pilotlog.txt
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc   1008119 May  2 07:57 log.49645815._025316.job.log.1
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc       357 May  2 07:57 output.list
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc       410 May  2 07:57 runtime_log
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc   1382400 May  2 07:57 result.tar.gz
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc      8455 May  2 07:57 runtime_log.err
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc       655 May  2 07:57 0cb845da1335.diag
[2026-05-02 07:57:50] -rw-r--r--. 1 boinc boinc     20844 May  2 07:57 stderr.txt
[2026-05-02 07:57:50] HITS file was successfully produced:
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc 202470424 May  2 07:56 shared/HITS.pool.root.1
[2026-05-02 07:57:50]  *** Contents of shared directory: ***
[2026-05-02 07:57:50] total 419072
[2026-05-02 07:57:50] -rw-r--r--. 2 boinc boinc 224554124 May  2 04:53 ATLAS.root_0
[2026-05-02 07:57:50] -rw-r--r--. 2 boinc boinc     15667 May  2 04:53 start_atlas.sh
[2026-05-02 07:57:50] -rw-r--r--. 2 boinc boinc    697442 May  2 04:53 input.tar.gz
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc 202470424 May  2 07:56 HITS.pool.root.1
[2026-05-02 07:57:50] -rw-------. 1 boinc boinc   1382400 May  2 07:57 result.tar.gz
07:57:52 (1208): run_atlas exited; CPU time 70975.305850
07:57:52 (1208): called boinc_finish(0)

</stderr_txt>
]]>

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