Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:16 (1731910): wrapper (7.7.26015): starting
05:18:16 (1731910): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 05:18:16] Arguments: --nthreads 4
[2026-05-03 05:18:16] Threads: 4
[2026-05-03 05:18:16] Checking for CVMFS
[2026-05-03 05:18:16] No cvmfs_config command found, will try listing directly
[2026-05-03 05:18:16] CVMFS is ok
[2026-05-03 05:18:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 05:18:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 05:18:16] Further information can be found at the LHC@home message board.
[2026-05-03 05:18:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 05:18:16] Checking for apptainer binary...
[2026-05-03 05:18:16] which: no apptainer in ((null))
[2026-05-03 05:18:16] apptainer is not installed, using version from CVMFS
[2026-05-03 05:18:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 05:18:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-03 05:18:17] apptainer works
[2026-05-03 05:18:17] Set ATHENA_PROC_NUMBER=4
[2026-05-03 05:18:17] Set ATHENA_CORE_NUMBER=4
[2026-05-03 05:18:17] Starting ATLAS job with PandaID=7125349574
[2026-05-03 05:18:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 09:11:46]  *** The last 200 lines of the pilot log: ***
[2026-05-03 09:11:46] 2026-05-03 07:11:00,566 | INFO     | number of running child processes to parent process 1741589: 1
[2026-05-03 09:11:46] 2026-05-03 07:11:00,566 | INFO     | maximum number of monitored processes: 6
[2026-05-03 09:11:46] 2026-05-03 07:11:01,885 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 09:11:46] 2026-05-03 07:11:02,420 | INFO     | job 7125349574 has state=finished
[2026-05-03 09:11:46] 2026-05-03 07:11:02,421 | INFO     | preparing for final server update for job 7125349574 in state='finished'
[2026-05-03 09:11:46] 2026-05-03 07:11:02,421 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7125349574/jobReport.json
[2026-05-03 09:11:46] 2026-05-03 07:11:02,423 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/0/workernode_map.json
[2026-05-03 09:11:46] 2026-05-03 07:11:02,424 | INFO     | this job has now completed (state=finished)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,424 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,424 | INFO     | log transfer has been attempted: DONE
[2026-05-03 09:11:46] 2026-05-03 07:11:02,424 | INFO     | job 7125349574 has finished - writing final server update
[2026-05-03 09:11:46] 2026-05-03 07:11:02,425 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_888092/.job.ad'
[2026-05-03 09:11:46] 2026-05-03 07:11:02,425 | INFO     | total number of processed events: 400 (read)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,438 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7125349574/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,439 | INFO     | extracted standard info from prmon json
[2026-05-03 09:11:46] 2026-05-03 07:11:02,439 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 09:11:46] 2026-05-03 07:11:02,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 09:11:46] 2026-05-03 07:11:02,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 09:11:46] 2026-05-03 07:11:02,444 | INFO     | fitting pss+swap vs Time
[2026-05-03 09:11:46] 2026-05-03 07:11:02,444 | INFO     | sum of square deviations: 3627013396.9955883
[2026-05-03 09:11:46] 2026-05-03 07:11:02,446 | INFO     | sum of deviations: -10009494807.550661
[2026-05-03 09:11:46] 2026-05-03 07:11:02,446 | INFO     | mean x (centered): 0.0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,446 | INFO     | mean y: 2362951.5506607927
[2026-05-03 09:11:46] 2026-05-03 07:11:02,446 | INFO     | intersect: 2362951.5506607927
[2026-05-03 09:11:46] 2026-05-03 07:11:02,447 | INFO     | chi2: 1.4155779951944527
[2026-05-03 09:11:46] 2026-05-03 07:11:02,447 | INFO     | sum of square deviations: 3392567795.5
[2026-05-03 09:11:46] 2026-05-03 07:11:02,449 | INFO     | sum of deviations: -9807064549.999994
[2026-05-03 09:11:46] 2026-05-03 07:11:02,449 | INFO     | mean x (centered): 0.0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,449 | INFO     | mean y: 2363083.4324324327
[2026-05-03 09:11:46] 2026-05-03 07:11:02,449 | INFO     | intersect: 2363083.4324324327
[2026-05-03 09:11:46] 2026-05-03 07:11:02,450 | INFO     | chi2: 1.4147315142248964
[2026-05-03 09:11:46] 2026-05-03 07:11:02,450 | INFO     | current chi2=1.4147315142248964 (change=0.05979755071284709 %)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,450 | INFO     | right removable region: 221
[2026-05-03 09:11:46] 2026-05-03 07:11:02,450 | INFO     | sum of square deviations: 3392580789.4954906
[2026-05-03 09:11:46] 2026-05-03 07:11:02,452 | INFO     | sum of deviations: -36515019864.97297
[2026-05-03 09:11:46] 2026-05-03 07:11:02,452 | INFO     | mean x (centered): 0.0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,452 | INFO     | mean y: 2379953.472972973
[2026-05-03 09:11:46] 2026-05-03 07:11:02,452 | INFO     | intersect: 2379953.472972973
[2026-05-03 09:11:46] 2026-05-03 07:11:02,453 | INFO     | chi2: 0.08595134344462793
[2026-05-03 09:11:46] 2026-05-03 07:11:02,453 | INFO     | current chi2=0.08595134344462793 (change=93.92818030963944 %)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,453 | INFO     | sum of square deviations: 3168473956.9953957
[2026-05-03 09:11:46] 2026-05-03 07:11:02,454 | INFO     | sum of deviations: -31813793609.23964
[2026-05-03 09:11:46] 2026-05-03 07:11:02,455 | INFO     | mean x (centered): 0.0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,455 | INFO     | mean y: 2376758.239631336
[2026-05-03 09:11:46] 2026-05-03 07:11:02,455 | INFO     | intersect: 2376758.239631336
[2026-05-03 09:11:46] 2026-05-03 07:11:02,455 | INFO     | chi2: 0.08049079513140411
[2026-05-03 09:11:46] 2026-05-03 07:11:02,455 | INFO     | current chi2=0.08049079513140411 (change=6.353069183545274 %)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,456 | INFO     | left removable region: 10
[2026-05-03 09:11:46] 2026-05-03 07:11:02,456 | INFO     | sum of square deviations: 2912836010.0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,457 | INFO     | sum of deviations: -31026561028.000004
[2026-05-03 09:11:46] 2026-05-03 07:11:02,457 | INFO     | mean x (centered): 0.0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,458 | INFO     | mean y: 2377322.255924171
[2026-05-03 09:11:46] 2026-05-03 07:11:02,458 | INFO     | intersect: 2377322.255924171
[2026-05-03 09:11:46] 2026-05-03 07:11:02,458 | INFO     | chi2: 0.07810855786529415
[2026-05-03 09:11:46] 2026-05-03 07:11:02,458 | INFO     | current memory leak: -10.65 B/s (using 211 data points, chi2=0.08)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | could have reported an average CPU frequency of 2512 MHz (11 samples)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | ..............................
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | . Timing measurements:
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | . get job = 0 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | . initial setup = 18 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | . payload setup = 29 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | . stage-in = 0 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,459 | INFO     | . payload execution = 13856 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,460 | INFO     | . stage-out = 1 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,460 | INFO     | . log creation = 0 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,460 | INFO     | ..............................
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | 
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | job summary report
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | --------------------------------------------------
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | PanDA job id: 7125349574
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | task id: 50016906
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | errors: (none)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,560 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | pilot state: finished 
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | transexitcode: 0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | exeerrorcode: 0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | exeerrordiag: 
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | exitcode: 0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | exitmsg: OK
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | cpuconsumptiontime: 50869 s
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | nevents: 400
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | neventsw: 0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | pid: 1741589
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | pgrp: 1741589
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | corecount: 4
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | event service: False
[2026-05-03 09:11:46] 2026-05-03 07:11:02,561 | INFO     | sizes: {0: 2275281, 1: 2277082, 12: 2277110, 13889: 2307349, 13890: 2307348, 13891: 2316424, 13893: 2316802}
[2026-05-03 09:11:46] 2026-05-03 07:11:02,562 | INFO     | --------------------------------------------------
[2026-05-03 09:11:46] 2026-05-03 07:11:02,562 | INFO     | 
[2026-05-03 09:11:46] 2026-05-03 07:11:02,562 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-05-03 09:11:46] 2026-05-03 07:11:02,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,588 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,588 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,588 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,590 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,590 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 09:11:46] 2026-05-03 07:11:02,590 | INFO     | job 7125349574 has completed (purged errors)
[2026-05-03 09:11:46] 2026-05-03 07:11:02,590 | INFO     | overall cleanup function is called
[2026-05-03 09:11:46] 2026-05-03 07:11:03,598 | INFO     | --- collectZombieJob: --- 10, [1741589]
[2026-05-03 09:11:46] 2026-05-03 07:11:03,599 | INFO     | zombie collector waiting for pid 1741589
[2026-05-03 09:11:46] 2026-05-03 07:11:03,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 09:11:46] 2026-05-03 07:11:03,599 | INFO     | collected zombie processes
[2026-05-03 09:11:46] 2026-05-03 07:11:03,599 | INFO     | will attempt to kill all subprocesses of pid=1741589
[2026-05-03 09:11:46] 2026-05-03 07:11:03,970 | INFO     | process IDs to be killed: [1741589] (in reverse order)
[2026-05-03 09:11:46] 2026-05-03 07:11:04,123 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 09:11:46] 2026-05-03 07:11:04,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 09:11:46] 2026-05-03 07:11:04,138 | INFO     | did not find any defunct processes belonging to 1741589
[2026-05-03 09:11:46] 2026-05-03 07:11:04,151 | INFO     | did not find any defunct processes belonging to 1741589
[2026-05-03 09:11:46] 2026-05-03 07:11:04,151 | INFO     | Ready for new job
[2026-05-03 09:11:46] 2026-05-03 07:11:04,153 | INFO     | ***************************************
[2026-05-03 09:11:46] 2026-05-03 07:11:04,154 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 09:11:46] 2026-05-03 07:11:04,154 | INFO     | ***************************************
[2026-05-03 09:11:46] 2026-05-03 07:11:04,154 | INFO     | 
[2026-05-03 09:11:46] 2026-05-03 07:11:04,158 | INFO     | architecture information:
[2026-05-03 09:11:46] 2026-05-03 07:11:04,158 | INFO     | executing command: cat /etc/os-release
[2026-05-03 09:11:46] 2026-05-03 07:11:04,177 | INFO     | cat /etc/os-release:
[2026-05-03 09:11:46] NAME="CentOS Linux"
[2026-05-03 09:11:46] VERSION="7 (Core)"
[2026-05-03 09:11:46] ID="centos"
[2026-05-03 09:11:46] ID_LIKE="rhel fedora"
[2026-05-03 09:11:46] VERSION_ID="7"
[2026-05-03 09:11:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 09:11:46] ANSI_COLOR="0;31"
[2026-05-03 09:11:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 09:11:46] HOME_URL="https://www.centos.org/"
[2026-05-03 09:11:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 09:11:46] 
[2026-05-03 09:11:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 09:11:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 09:11:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 09:11:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 09:11:46] 
[2026-05-03 09:11:46] 2026-05-03 07:11:04,177 | INFO     | ***************************************
[2026-05-03 09:11:46] 2026-05-03 07:11:04,679 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-05-03 09:11:46] 2026-05-03 07:11:04,702 | INFO     | sufficient remaining disk space (52768538624 B)
[2026-05-03 09:11:46] 2026-05-03 07:11:04,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 09:11:46] 2026-05-03 07:11:04,703 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 09:11:46] 2026-05-03 07:11:04,703 | INFO     | update_server=False
[2026-05-03 09:11:46] 2026-05-03 07:11:04,703 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 09:11:46] 2026-05-03 07:11:04,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 09:11:46] 2026-05-03 07:11:04,703 | INFO     | aborting loop
[2026-05-03 09:11:46] 2026-05-03 07:11:04,944 | INFO     | all data control threads have been joined
[2026-05-03 09:11:46] 2026-05-03 07:11:05,629 | INFO     | all payload control threads have been joined
[2026-05-03 09:11:46] 2026-05-03 07:11:05,707 | INFO     | [job] retrieve thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:05,711 | INFO     | [job] job monitor thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:05,847 | INFO     | [payload] failed_post thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:05,933 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:05,949 | INFO     | [data] control thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:05,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 09:11:46] 2026-05-03 07:11:06,166 | INFO     | all job control threads have been joined
[2026-05-03 09:11:46] 2026-05-03 07:11:06,267 | INFO     | [data] copytool_in thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:06,450 | INFO     | [payload] validate_post thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:06,634 | INFO     | [payload] control thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:06,717 | INFO     | [job] validate thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:06,842 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:06,934 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:07,030 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:07,171 | INFO     | [job] control thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:07,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 09:11:46] 2026-05-03 07:11:07,983 | INFO     | [data] copytool_out thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:07,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 09:11:46] 2026-05-03 07:11:08,575 | INFO     | [job] queue monitor thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:12,008 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 09:11:46] 2026-05-03 07:11:35,978 | INFO     | PID=1736115 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 09:11:46] 2026-05-03 07:11:35,979 | INFO     | .. there are 13 such processes running
[2026-05-03 09:11:46] 2026-05-03 07:11:35,979 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 09:11:46] 2026-05-03 07:11:35,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 09:11:46] 2026-05-03 07:11:35,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 09:11:46] 2026-05-03 07:11:39,671 | INFO     | [monitor] cgroup control has ended
[2026-05-03 09:11:46] 2026-05-03 07:11:40,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22411728934720)>', '<ExcThread(monitor, started 22411482490624)>']
[2026-05-03 09:11:46] 2026-05-03 07:11:41,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 09:11:46] 2026-05-03 07:11:41,005 | INFO     | [monitor] control thread has ended
[2026-05-03 09:11:46] 2026-05-03 07:11:45,702 | INFO     | all workflow threads have been joined
[2026-05-03 09:11:46] 2026-05-03 07:11:45,703 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 09:11:46] 2026-05-03 07:11:45,703 | INFO     | traces error code: 0
[2026-05-03 09:11:46] 2026-05-03 07:11:45,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 09:11:46] 2026-05-03 07:11:45,897 [wrapper] ==== pilot stdout END ====
[2026-05-03 09:11:46] 2026-05-03 07:11:45,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 09:11:46] 2026-05-03 07:11:45,902 [wrapper] pilotpid: 1736115
[2026-05-03 09:11:46] 2026-05-03 07:11:45,904 [wrapper] Pilot exit status: 0
[2026-05-03 09:11:46] 2026-05-03 07:11:45,918 [wrapper] pandaids: 7125349574
[2026-05-03 09:11:46] 2026-05-03 07:11:46,005 [wrapper] cleanup supervisor_pilot 1991582 1736116
[2026-05-03 09:11:46] 2026-05-03 07:11:46,009 [wrapper] Test setup, not cleaning
[2026-05-03 09:11:46] 2026-05-03 07:11:46,011 [wrapper] apfmon messages muted
[2026-05-03 09:11:46] 2026-05-03 07:11:46,014 [wrapper] ==== wrapper stdout END ====
[2026-05-03 09:11:46] 2026-05-03 07:11:46,016 [wrapper] ==== wrapper stderr END ====
[2026-05-03 09:11:46]  *** Error codes and diagnostics ***
[2026-05-03 09:11:46]     "exeErrorCode": 0,
[2026-05-03 09:11:46]     "pilotErrorCode": 0,
[2026-05-03 09:11:46]  *** Listing of results directory ***
[2026-05-03 09:11:46] total 493712
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc      5631 May  1 22:27 queuedata.json
[2026-05-03 09:11:46] -rwx------. 1 boinc boinc     36322 May  1 22:27 runpilot2-wrapper.sh
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc       100 May  3 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 09:11:46] -rwxr-xr-x. 1 boinc boinc      7986 May  3 05:18 run_atlas
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc       105 May  3 05:18 job.xml
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc      6482 May  3 05:18 init_data.xml
[2026-05-03 09:11:46] -rw-r--r--. 2 boinc boinc 319882111 May  3 05:18 EVNT.50016902._000041.pool.root.1
[2026-05-03 09:11:46] -rw-r--r--. 2 boinc boinc     15667 May  3 05:18 start_atlas.sh
[2026-05-03 09:11:46] drwxrwx--x. 2 boinc boinc      4096 May  3 05:18 shared
[2026-05-03 09:11:46] -rw-r--r--. 2 boinc boinc    697407 May  3 05:18 input.tar.gz
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc         0 May  3 05:18 boinc_lockfile
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc      2561 May  3 05:18 pandaJob.out
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc   1002964 May  3 05:18 agis_schedconf.cvmfs.json
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc       448 May  3 05:19 workernode_map.json
[2026-05-03 09:11:46] drwx------. 5 boinc boinc      4096 May  3 05:19 pilot3
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc 178291145 May  3 09:10 HITS.50016906._001049.pool.root.1
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc       488 May  3 09:10 boinc_task_state.xml
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc        95 May  3 09:10 pilot_heartbeat.json
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc      1033 May  3 09:10 memory_monitor_summary.json
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc   1508687 May  3 09:10 agis_ddmendpoints.agis.ALL.json
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc    341721 May  3 09:11 log.50016906._001049.job.log.tgz.1
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc      6418 May  3 09:11 heartbeat_new.json
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc      6309 May  3 09:11 heartbeat.json
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc      8192 May  3 09:11 boinc_mmap_file
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc        28 May  3 09:11 wrapper_checkpoint.txt
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc      4832 May  3 09:11 pilotlog.txt
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc   1282152 May  3 09:11 log.50016906._001049.job.log.1
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc       357 May  3 09:11 output.list
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc       410 May  3 09:11 runtime_log
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc   1638400 May  3 09:11 result.tar.gz
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc      8828 May  3 09:11 runtime_log.err
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc       665 May  3 09:11 0ca89b39c86f.diag
[2026-05-03 09:11:46] -rw-r--r--. 1 boinc boinc     21098 May  3 09:11 stderr.txt
[2026-05-03 09:11:46] HITS file was successfully produced:
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc 178291145 May  3 09:10 shared/HITS.pool.root.1
[2026-05-03 09:11:46]  *** Contents of shared directory: ***
[2026-05-03 09:11:46] total 488812
[2026-05-03 09:11:46] -rw-r--r--. 2 boinc boinc 319882111 May  3 05:18 ATLAS.root_0
[2026-05-03 09:11:46] -rw-r--r--. 2 boinc boinc     15667 May  3 05:18 start_atlas.sh
[2026-05-03 09:11:46] -rw-r--r--. 2 boinc boinc    697407 May  3 05:18 input.tar.gz
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc 178291145 May  3 09:10 HITS.pool.root.1
[2026-05-03 09:11:46] -rw-------. 1 boinc boinc   1638400 May  3 09:11 result.tar.gz
09:11:47 (1731910): run_atlas exited; CPU time 51390.525890
09:11:47 (1731910): called boinc_finish(0)

</stderr_txt>
]]>

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