Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:46:57 (27182): wrapper (7.7.26015): starting
08:46:57 (27182): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 08:46:57] Arguments: --nthreads 8
[2026-05-02 08:46:57] Threads: 8
[2026-05-02 08:46:57] Checking for CVMFS
[2026-05-02 08:46:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 08:46:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 08:46:58] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 08:46:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 08:46:58] 2.11.2.0 31558 23863 94072 159122 1 263 21960391 25165825 365 130560 0 121657531 99.984 12720128 6891 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 08:46:58] CVMFS is ok
[2026-05-02 08:46:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 08:46:58] Checking for apptainer binary...
[2026-05-02 08:46:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 08:46:58] Running /usr/bin/apptainer --version
[2026-05-02 08:46:58] apptainer version 1.3.2-1.el7
[2026-05-02 08:46:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 08:46:59] cg-vwn422.simple-grid.lan
[2026-05-02 08:46:59] apptainer works
[2026-05-02 08:46:59] Set ATHENA_PROC_NUMBER=8
[2026-05-02 08:46:59] Set ATHENA_CORE_NUMBER=8
[2026-05-02 08:46:59] Starting ATLAS job with PandaID=7122770734
[2026-05-02 08:46:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 12:03:55]  *** The last 200 lines of the pilot log: ***
[2026-05-02 12:03:55] 2026-05-02 10:03:04,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 12:03:55] 2026-05-02 10:03:05,402 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 12:03:55] 2026-05-02 10:03:05,642 | INFO     | job 7122770734 has state=finished
[2026-05-02 12:03:55] 2026-05-02 10:03:05,642 | INFO     | preparing for final server update for job 7122770734 in state='finished'
[2026-05-02 12:03:55] 2026-05-02 10:03:06,325 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,326 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-7122770734/jobReport.json
[2026-05-02 12:03:55] 2026-05-02 10:03:06,328 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-05-02 12:03:55] 2026-05-02 10:03:06,329 | INFO     | this job has now completed (state=finished)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,329 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,329 | INFO     | log transfer has been attempted: DONE
[2026-05-02 12:03:55] 2026-05-02 10:03:06,329 | INFO     | job 7122770734 has finished - writing final server update
[2026-05-02 12:03:55] 2026-05-02 10:03:06,330 | INFO     | total number of processed events: 400 (read)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,332 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7122770734/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,332 | INFO     | extracted standard info from prmon json
[2026-05-02 12:03:55] 2026-05-02 10:03:06,332 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 12:03:55] 2026-05-02 10:03:06,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 12:03:55] 2026-05-02 10:03:06,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 12:03:55] 2026-05-02 10:03:06,337 | INFO     | fitting pss+swap vs Time
[2026-05-02 12:03:55] 2026-05-02 10:03:06,337 | INFO     | sum of square deviations: 2194675568.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,339 | INFO     | sum of deviations: 7150848890.999992
[2026-05-02 12:03:55] 2026-05-02 10:03:06,339 | INFO     | mean x (centered): 0.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,339 | INFO     | mean y: 2508517.2604166665
[2026-05-02 12:03:55] 2026-05-02 10:03:06,339 | INFO     | intersect: 2508517.2604166665
[2026-05-02 12:03:55] 2026-05-02 10:03:06,340 | INFO     | chi2: 1.7248603505472866
[2026-05-02 12:03:55] 2026-05-02 10:03:06,340 | INFO     | sum of square deviations: 2027639878.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,342 | INFO     | sum of deviations: 7001982356.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,342 | INFO     | mean x (centered): 0.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,342 | INFO     | mean y: 2508381.320855615
[2026-05-02 12:03:55] 2026-05-02 10:03:06,342 | INFO     | intersect: 2508381.320855615
[2026-05-02 12:03:55] 2026-05-02 10:03:06,342 | INFO     | chi2: 1.7256772930380664
[2026-05-02 12:03:55] 2026-05-02 10:03:06,343 | INFO     | current chi2=1.7256772930380664 (change=-0.04736281928682415 %)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,343 | INFO     | right removable region: 186
[2026-05-02 12:03:55] 2026-05-02 10:03:06,343 | INFO     | sum of square deviations: 2027639878.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,345 | INFO     | sum of deviations: -23441875928.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,345 | INFO     | mean x (centered): 0.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,345 | INFO     | mean y: 2536124.7914438504
[2026-05-02 12:03:55] 2026-05-02 10:03:06,345 | INFO     | intersect: 2536124.7914438504
[2026-05-02 12:03:55] 2026-05-02 10:03:06,345 | INFO     | chi2: 0.15634106137904916
[2026-05-02 12:03:55] 2026-05-02 10:03:06,346 | INFO     | current chi2=0.15634106137904916 (change=90.93601627926323 %)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,346 | INFO     | sum of square deviations: 1869302025.5
[2026-05-02 12:03:55] 2026-05-02 10:03:06,347 | INFO     | sum of deviations: -19905978872.499992
[2026-05-02 12:03:55] 2026-05-02 10:03:06,348 | INFO     | mean x (centered): 0.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,348 | INFO     | mean y: 2532677.0934065934
[2026-05-02 12:03:55] 2026-05-02 10:03:06,348 | INFO     | intersect: 2532677.0934065934
[2026-05-02 12:03:55] 2026-05-02 10:03:06,348 | INFO     | chi2: 0.14206811121533133
[2026-05-02 12:03:55] 2026-05-02 10:03:06,348 | INFO     | current chi2=0.14206811121533133 (change=9.129367574851646 %)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,348 | INFO     | left removable region: 10
[2026-05-02 12:03:55] 2026-05-02 10:03:06,349 | INFO     | sum of square deviations: 1690450300.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,350 | INFO     | sum of deviations: -19270612205.5
[2026-05-02 12:03:55] 2026-05-02 10:03:06,350 | INFO     | mean x (centered): 0.0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,350 | INFO     | mean y: 2533327.4375
[2026-05-02 12:03:55] 2026-05-02 10:03:06,350 | INFO     | intersect: 2533327.4375
[2026-05-02 12:03:55] 2026-05-02 10:03:06,351 | INFO     | chi2: 0.1404085403867875
[2026-05-02 12:03:55] 2026-05-02 10:03:06,351 | INFO     | current memory leak: -11.40 B/s (using 176 data points, chi2=0.14)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | ..............................
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . Timing measurements:
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . get job = 0 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . initial setup = 8 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . payload setup = 18 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . stage-in = 0 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . payload execution = 11706 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,352 | INFO     | . stage-out = 1 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,353 | INFO     | . log creation = 0 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,353 | INFO     | ..............................
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | 
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | job summary report
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | --------------------------------------------------
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | PanDA job id: 7122770734
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | task id: 49645815
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | errors: (none)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,466 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | pilot state: finished 
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | transexitcode: 0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | exeerrorcode: 0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | exeerrordiag: 
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | exitcode: 0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | exitmsg: OK
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | cpuconsumptiontime: 70212 s
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | nevents: 400
[2026-05-02 12:03:55] 2026-05-02 10:03:06,467 | INFO     | neventsw: 0
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | pid: 3533
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | pgrp: 3533
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | corecount: 8
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | event service: False
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | sizes: {0: 2275344, 1: 2277229, 2: 2277229, 11729: 2306739, 11732: 2315737, 11735: 2315793, 11736: 2316115}
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | --------------------------------------------------
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | 
[2026-05-02 12:03:55] 2026-05-02 10:03:06,468 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 12:03:55] 2026-05-02 10:03:06,512 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,512 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,512 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 12:03:55] 2026-05-02 10:03:06,514 | INFO     | job 7122770734 has completed (purged errors)
[2026-05-02 12:03:55] 2026-05-02 10:03:06,515 | INFO     | overall cleanup function is called
[2026-05-02 12:03:55] 2026-05-02 10:03:07,523 | INFO     | --- collectZombieJob: --- 10, [3533]
[2026-05-02 12:03:55] 2026-05-02 10:03:07,523 | INFO     | zombie collector waiting for pid 3533
[2026-05-02 12:03:55] 2026-05-02 10:03:07,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 12:03:55] 2026-05-02 10:03:07,524 | INFO     | collected zombie processes
[2026-05-02 12:03:55] 2026-05-02 10:03:07,524 | INFO     | will attempt to kill all subprocesses of pid=3533
[2026-05-02 12:03:55] 2026-05-02 10:03:07,581 | INFO     | process IDs to be killed: [3533] (in reverse order)
[2026-05-02 12:03:55] 2026-05-02 10:03:07,643 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 12:03:55] 2026-05-02 10:03:07,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 12:03:55] 2026-05-02 10:03:07,646 | INFO     | did not find any defunct processes belonging to 3533
[2026-05-02 12:03:55] 2026-05-02 10:03:07,648 | INFO     | did not find any defunct processes belonging to 3533
[2026-05-02 12:03:55] 2026-05-02 10:03:07,648 | INFO     | Ready for new job
[2026-05-02 12:03:55] 2026-05-02 10:03:07,650 | INFO     | ***************************************
[2026-05-02 12:03:55] 2026-05-02 10:03:07,650 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 12:03:55] 2026-05-02 10:03:07,650 | INFO     | ***************************************
[2026-05-02 12:03:55] 2026-05-02 10:03:07,650 | INFO     | 
[2026-05-02 12:03:55] 2026-05-02 10:03:07,651 | INFO     | pilot is running in a VM
[2026-05-02 12:03:55] 2026-05-02 10:03:07,651 | INFO     | architecture information:
[2026-05-02 12:03:55] 2026-05-02 10:03:07,652 | INFO     | executing command: cat /etc/os-release
[2026-05-02 12:03:55] 2026-05-02 10:03:07,682 | INFO     | cat /etc/os-release:
[2026-05-02 12:03:55] NAME="CentOS Linux"
[2026-05-02 12:03:55] VERSION="7 (Core)"
[2026-05-02 12:03:55] ID="centos"
[2026-05-02 12:03:55] ID_LIKE="rhel fedora"
[2026-05-02 12:03:55] VERSION_ID="7"
[2026-05-02 12:03:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 12:03:55] ANSI_COLOR="0;31"
[2026-05-02 12:03:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 12:03:55] HOME_URL="https://www.centos.org/"
[2026-05-02 12:03:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 12:03:55] 
[2026-05-02 12:03:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 12:03:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 12:03:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 12:03:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 12:03:55] 
[2026-05-02 12:03:55] 2026-05-02 10:03:07,682 | INFO     | ***************************************
[2026-05-02 12:03:55] 2026-05-02 10:03:08,184 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 12:03:55] 2026-05-02 10:03:08,205 | INFO     | sufficient remaining disk space (497376296960 B)
[2026-05-02 12:03:55] 2026-05-02 10:03:08,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 12:03:55] 2026-05-02 10:03:08,206 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 12:03:55] 2026-05-02 10:03:08,206 | INFO     | update_server=False
[2026-05-02 12:03:55] 2026-05-02 10:03:08,206 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 12:03:55] 2026-05-02 10:03:08,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 12:03:55] 2026-05-02 10:03:08,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 12:03:55] 2026-05-02 10:03:08,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 12:03:55] 2026-05-02 10:03:08,208 | INFO     | aborting loop
[2026-05-02 12:03:55] 2026-05-02 10:03:08,535 | INFO     | all data control threads have been joined
[2026-05-02 12:03:55] 2026-05-02 10:03:08,934 | INFO     | all payload control threads have been joined
[2026-05-02 12:03:55] 2026-05-02 10:03:09,207 | INFO     | [job] retrieve thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,213 | INFO     | [job] queue monitor thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,214 | INFO     | [job] job monitor thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,290 | INFO     | [job] validate thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,541 | INFO     | [data] control thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,543 | INFO     | all job control threads have been joined
[2026-05-02 12:03:55] 2026-05-02 10:03:09,733 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,770 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,817 | INFO     | [payload] validate_post thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,891 | INFO     | [payload] failed_post thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:09,940 | INFO     | [payload] control thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:10,204 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:10,213 | INFO     | [data] copytool_out thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:10,272 | INFO     | [data] copytool_in thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:10,548 | INFO     | [job] control thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:10,589 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:11,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 12:03:55] 2026-05-02 10:03:15,528 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 12:03:55] 2026-05-02 10:03:37,626 | INFO     | PID=31304 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 12:03:55] 2026-05-02 10:03:37,626 | INFO     | .. there are 2 such processes running
[2026-05-02 12:03:55] 2026-05-02 10:03:37,628 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 12:03:55] 2026-05-02 10:03:37,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 12:03:55] 2026-05-02 10:03:37,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 12:03:55] 2026-05-02 10:03:48,317 | INFO     | [monitor] cgroup control has ended
[2026-05-02 12:03:55] 2026-05-02 10:03:50,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659539085120)>', '<ExcThread(monitor, started 140658350216960)>']
[2026-05-02 12:03:55] 2026-05-02 10:03:50,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 12:03:55] 2026-05-02 10:03:50,691 | INFO     | [monitor] control thread has ended
[2026-05-02 12:03:55] 2026-05-02 10:03:55,136 | INFO     | all workflow threads have been joined
[2026-05-02 12:03:55] 2026-05-02 10:03:55,136 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 12:03:55] 2026-05-02 10:03:55,136 | INFO     | traces error code: 0
[2026-05-02 12:03:55] 2026-05-02 10:03:55,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 12:03:55] 2026-05-02 10:03:55,289 [wrapper] ==== pilot stdout END ====
[2026-05-02 12:03:55] 2026-05-02 10:03:55,293 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 12:03:55] 2026-05-02 10:03:55,297 [wrapper] pilotpid: 31304
[2026-05-02 12:03:55] 2026-05-02 10:03:55,302 [wrapper] Pilot exit status: 0
[2026-05-02 12:03:55] 2026-05-02 10:03:55,339 [wrapper] pandaids: 7122770734
[2026-05-02 12:03:55] 2026-05-02 10:03:55,418 [wrapper] cleanup supervisor_pilot 19879 31305
[2026-05-02 12:03:55] 2026-05-02 10:03:55,426 [wrapper] Test setup, not cleaning
[2026-05-02 12:03:55] 2026-05-02 10:03:55,443 [wrapper] apfmon messages muted
[2026-05-02 12:03:55] 2026-05-02 10:03:55,449 [wrapper] ==== wrapper stdout END ====
[2026-05-02 12:03:55] 2026-05-02 10:03:55,454 [wrapper] ==== wrapper stderr END ====
[2026-05-02 12:03:55]  *** Error codes and diagnostics ***
[2026-05-02 12:03:55]     "exeErrorCode": 0,
[2026-05-02 12:03:55]     "pilotErrorCode": 0,
[2026-05-02 12:03:55]  *** Listing of results directory ***
[2026-05-02 12:03:55] total 416688
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc      5631 May  1 22:27 queuedata.json
[2026-05-02 12:03:55] -rwx------. 1 boinc boinc     36322 May  1 22:27 runpilot2-wrapper.sh
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc       100 May  2 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 12:03:55] -rwxr-xr-x. 1 boinc boinc      7986 May  2 08:46 run_atlas
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc       105 May  2 08:46 job.xml
[2026-05-02 12:03:55] -rw-r--r--. 2 boinc boinc 223539415 May  2 08:46 EVNT.48629115._000416.pool.root.1
[2026-05-02 12:03:55] -rw-r--r--. 2 boinc boinc    697441 May  2 08:46 input.tar.gz
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc      6306 May  2 08:46 init_data.xml
[2026-05-02 12:03:55] -rw-r--r--. 2 boinc boinc     15667 May  2 08:46 start_atlas.sh
[2026-05-02 12:03:55] drwxrwx--x. 2 boinc boinc        68 May  2 08:46 shared
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc         0 May  2 08:46 boinc_lockfile
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc      2627 May  2 08:46 pandaJob.out
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc   1002976 May  2 08:47 agis_schedconf.cvmfs.json
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc       415 May  2 08:47 workernode_map.json
[2026-05-02 12:03:55] drwx------. 5 boinc boinc      4096 May  2 08:47 pilot3
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc 196114117 May  2 12:02 HITS.49645815._024985.pool.root.1
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc       488 May  2 12:02 boinc_task_state.xml
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc      1016 May  2 12:02 memory_monitor_summary.json
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc   1508687 May  2 12:03 agis_ddmendpoints.agis.ALL.json
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc    355795 May  2 12:03 log.49645815._024985.job.log.tgz.1
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc      6333 May  2 12:03 heartbeat_new.json
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc      6224 May  2 12:03 heartbeat.json
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc      8192 May  2 12:03 boinc_mmap_file
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc        28 May  2 12:03 wrapper_checkpoint.txt
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc        95 May  2 12:03 pilot_heartbeat.json
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc      4883 May  2 12:03 pilotlog.txt
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc   1101169 May  2 12:03 log.49645815._024985.job.log.1
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc       357 May  2 12:03 output.list
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc       410 May  2 12:03 runtime_log
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc   1474560 May  2 12:03 result.tar.gz
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc      8439 May  2 12:03 runtime_log.err
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc       655 May  2 12:03 0cb66f85f9fd.diag
[2026-05-02 12:03:55] -rw-r--r--. 1 boinc boinc     20860 May  2 12:03 stderr.txt
[2026-05-02 12:03:55] HITS file was successfully produced:
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc 196114117 May  2 12:02 shared/HITS.pool.root.1
[2026-05-02 12:03:55]  *** Contents of shared directory: ***
[2026-05-02 12:03:55] total 411964
[2026-05-02 12:03:55] -rw-r--r--. 2 boinc boinc 223539415 May  2 08:46 ATLAS.root_0
[2026-05-02 12:03:55] -rw-r--r--. 2 boinc boinc    697441 May  2 08:46 input.tar.gz
[2026-05-02 12:03:55] -rw-r--r--. 2 boinc boinc     15667 May  2 08:46 start_atlas.sh
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc 196114117 May  2 12:02 HITS.pool.root.1
[2026-05-02 12:03:55] -rw-------. 1 boinc boinc   1474560 May  2 12:03 result.tar.gz
12:03:57 (27182): run_atlas exited; CPU time 70309.023247
12:03:57 (27182): called boinc_finish(0)

</stderr_txt>
]]>

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