Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:48:13 (28401): wrapper (7.7.26015): starting
08:48:13 (28401): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 08:48:13] Arguments: --nthreads 8
[2026-05-02 08:48:13] Threads: 8
[2026-05-02 08:48:13] Checking for CVMFS
[2026-05-02 08:48:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 08:48:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 08:48:17] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 08:48:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 08:48:19] 2.11.2.0 26242 23849 100732 159122 3 54 22765414 25165825 96 130560 0 7676153 99.866 6303226 8732 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 08:48:19] CVMFS is ok
[2026-05-02 08:48:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 08:48:19] Checking for apptainer binary...
[2026-05-02 08:48:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 08:48:19] Running /usr/bin/apptainer --version
[2026-05-02 08:48:19] apptainer version 1.3.2-1.el7
[2026-05-02 08:48:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 08:48:57] cg-vwn414.simple-grid.lan
[2026-05-02 08:48:57] apptainer works
[2026-05-02 08:48:57] Set ATHENA_PROC_NUMBER=8
[2026-05-02 08:48:57] Set ATHENA_CORE_NUMBER=8
[2026-05-02 08:48:58] Starting ATLAS job with PandaID=7125349640
[2026-05-02 08:48:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 13:42:01]  *** The last 200 lines of the pilot log: ***
[2026-05-02 13:42:01] 2026-05-02 11:41:22,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 13:42:01] 2026-05-02 11:41:22,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 13:42:01] 2026-05-02 11:41:22,145 | INFO     | fitting pss+swap vs Time
[2026-05-02 13:42:01] 2026-05-02 11:41:22,146 | INFO     | sum of square deviations: 6448679050.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,148 | INFO     | sum of deviations: 193620303191.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,149 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,149 | INFO     | mean y: 2427420.1272727274
[2026-05-02 13:42:01] 2026-05-02 11:41:22,149 | INFO     | intersect: 2427420.1272727274
[2026-05-02 13:42:01] 2026-05-02 11:41:22,149 | INFO     | chi2: 9.96878196164325
[2026-05-02 13:42:01] 2026-05-02 11:41:22,150 | INFO     | sum of square deviations: 6103286527.5
[2026-05-02 13:42:01] 2026-05-02 11:41:22,153 | INFO     | sum of deviations: 208637778999.00003
[2026-05-02 13:42:01] 2026-05-02 11:41:22,153 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,153 | INFO     | mean y: 2433927.577777778
[2026-05-02 13:42:01] 2026-05-02 11:41:22,153 | INFO     | intersect: 2433927.577777778
[2026-05-02 13:42:01] 2026-05-02 11:41:22,154 | INFO     | chi2: 9.230344858608353
[2026-05-02 13:42:01] 2026-05-02 11:41:22,154 | INFO     | current chi2=9.230344858608353 (change=7.407495779084866 %)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,154 | INFO     | right removable region: 269
[2026-05-02 13:42:01] 2026-05-02 11:41:22,155 | INFO     | sum of square deviations: 6103286527.5
[2026-05-02 13:42:01] 2026-05-02 11:41:22,157 | INFO     | sum of deviations: 95146900707.5
[2026-05-02 13:42:01] 2026-05-02 11:41:22,158 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,158 | INFO     | mean y: 2470884.1222222224
[2026-05-02 13:42:01] 2026-05-02 11:41:22,158 | INFO     | intersect: 2470884.1222222224
[2026-05-02 13:42:01] 2026-05-02 11:41:22,158 | INFO     | chi2: 4.600129231406336
[2026-05-02 13:42:01] 2026-05-02 11:41:22,158 | INFO     | current chi2=4.600129231406336 (change=53.8546509582997 %)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,159 | INFO     | sum of square deviations: 5770452380.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,162 | INFO     | sum of deviations: 17159093271.000004
[2026-05-02 13:42:01] 2026-05-02 11:41:22,162 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,162 | INFO     | mean y: 2506587.196226415
[2026-05-02 13:42:01] 2026-05-02 11:41:22,162 | INFO     | intersect: 2506587.196226415
[2026-05-02 13:42:01] 2026-05-02 11:41:22,162 | INFO     | chi2: 1.5019098524897407
[2026-05-02 13:42:01] 2026-05-02 11:41:22,163 | INFO     | current chi2=1.5019098524897407 (change=67.35070305773601 %)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,163 | INFO     | sum of square deviations: 5449944045.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,165 | INFO     | sum of deviations: -12033423030.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,166 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,166 | INFO     | mean y: 2520371.1
[2026-05-02 13:42:01] 2026-05-02 11:41:22,166 | INFO     | intersect: 2520371.1
[2026-05-02 13:42:01] 2026-05-02 11:41:22,166 | INFO     | chi2: 0.8651716362634274
[2026-05-02 13:42:01] 2026-05-02 11:41:22,167 | INFO     | current chi2=0.8651716362634274 (change=42.395235317937484 %)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,167 | INFO     | sum of square deviations: 5141528960.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,169 | INFO     | sum of deviations: -16882015167.000004
[2026-05-02 13:42:01] 2026-05-02 11:41:22,170 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,170 | INFO     | mean y: 2522746.529411765
[2026-05-02 13:42:01] 2026-05-02 11:41:22,170 | INFO     | intersect: 2522746.529411765
[2026-05-02 13:42:01] 2026-05-02 11:41:22,170 | INFO     | chi2: 0.8367538089921384
[2026-05-02 13:42:01] 2026-05-02 11:41:22,171 | INFO     | current chi2=0.8367538089921384 (change=3.284646199686139 %)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,171 | INFO     | left removable region: 20
[2026-05-02 13:42:01] 2026-05-02 11:41:22,171 | INFO     | sum of square deviations: 4787066500.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,174 | INFO     | sum of deviations: 735111548.9999998
[2026-05-02 13:42:01] 2026-05-02 11:41:22,174 | INFO     | mean x (centered): 0.0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,174 | INFO     | mean y: 2531662.3654618473
[2026-05-02 13:42:01] 2026-05-02 11:41:22,174 | INFO     | intersect: 2531662.3654618473
[2026-05-02 13:42:01] 2026-05-02 11:41:22,175 | INFO     | chi2: 0.004074474626814353
[2026-05-02 13:42:01] 2026-05-02 11:41:22,175 | INFO     | current memory leak: 0.15 B/s (using 249 data points, chi2=0.00)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,175 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | ..............................
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . Timing measurements:
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . get job = 0 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . initial setup = 116 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . payload setup = 241 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . stage-in = 0 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . payload execution = 16897 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,176 | INFO     | . stage-out = 4 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,177 | INFO     | . log creation = 1 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,177 | INFO     | ..............................
[2026-05-02 13:42:01] 2026-05-02 11:41:22,305 | INFO     | 
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | job summary report
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | --------------------------------------------------
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | PanDA job id: 7125349640
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | task id: 50016906
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | errors: (none)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 13:42:01] 2026-05-02 11:41:22,306 | INFO     | pilot state: finished 
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | transexitcode: 0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | exeerrorcode: 0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | exeerrordiag: 
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | exitcode: 0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | exitmsg: OK
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | cpuconsumptiontime: 63633 s
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | nevents: 400
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | neventsw: 0
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | pid: 4433
[2026-05-02 13:42:01] 2026-05-02 11:41:22,307 | INFO     | pgrp: 4433
[2026-05-02 13:42:01] 2026-05-02 11:41:22,308 | INFO     | corecount: 8
[2026-05-02 13:42:01] 2026-05-02 11:41:22,308 | INFO     | event service: False
[2026-05-02 13:42:01] 2026-05-02 11:41:22,308 | INFO     | sizes: {0: 2274613, 1: 2239684, 2: 2277099, 13: 2277127, 17142: 2309134, 17147: 2318132, 17151: 2318316, 17152: 2318510}
[2026-05-02 13:42:01] 2026-05-02 11:41:22,308 | INFO     | --------------------------------------------------
[2026-05-02 13:42:01] 2026-05-02 11:41:22,308 | INFO     | 
[2026-05-02 13:42:01] 2026-05-02 11:41:22,308 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 13:42:01] 2026-05-02 11:41:22,759 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,759 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,759 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,759 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | job 7125349640 has completed (purged errors)
[2026-05-02 13:42:01] 2026-05-02 11:41:22,761 | INFO     | overall cleanup function is called
[2026-05-02 13:42:01] 2026-05-02 11:41:23,770 | INFO     | --- collectZombieJob: --- 10, [4433]
[2026-05-02 13:42:01] 2026-05-02 11:41:23,770 | INFO     | zombie collector waiting for pid 4433
[2026-05-02 13:42:01] 2026-05-02 11:41:23,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 13:42:01] 2026-05-02 11:41:23,770 | INFO     | collected zombie processes
[2026-05-02 13:42:01] 2026-05-02 11:41:23,771 | INFO     | will attempt to kill all subprocesses of pid=4433
[2026-05-02 13:42:01] 2026-05-02 11:41:23,824 | INFO     | process IDs to be killed: [4433] (in reverse order)
[2026-05-02 13:42:01] 2026-05-02 11:41:24,622 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 13:42:01] 2026-05-02 11:41:24,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 13:42:01] 2026-05-02 11:41:24,624 | INFO     | did not find any defunct processes belonging to 4433
[2026-05-02 13:42:01] 2026-05-02 11:41:24,626 | INFO     | did not find any defunct processes belonging to 4433
[2026-05-02 13:42:01] 2026-05-02 11:41:24,626 | INFO     | Ready for new job
[2026-05-02 13:42:01] 2026-05-02 11:41:24,628 | INFO     | ***************************************
[2026-05-02 13:42:01] 2026-05-02 11:41:24,628 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 13:42:01] 2026-05-02 11:41:24,628 | INFO     | ***************************************
[2026-05-02 13:42:01] 2026-05-02 11:41:24,628 | INFO     | 
[2026-05-02 13:42:01] 2026-05-02 11:41:24,629 | INFO     | pilot is running in a VM
[2026-05-02 13:42:01] 2026-05-02 11:41:24,629 | INFO     | architecture information:
[2026-05-02 13:42:01] 2026-05-02 11:41:24,630 | INFO     | executing command: cat /etc/os-release
[2026-05-02 13:42:01] 2026-05-02 11:41:24,912 | INFO     | cat /etc/os-release:
[2026-05-02 13:42:01] NAME="CentOS Linux"
[2026-05-02 13:42:01] VERSION="7 (Core)"
[2026-05-02 13:42:01] ID="centos"
[2026-05-02 13:42:01] ID_LIKE="rhel fedora"
[2026-05-02 13:42:01] VERSION_ID="7"
[2026-05-02 13:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 13:42:01] ANSI_COLOR="0;31"
[2026-05-02 13:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 13:42:01] HOME_URL="https://www.centos.org/"
[2026-05-02 13:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 13:42:01] 
[2026-05-02 13:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 13:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 13:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 13:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 13:42:01] 
[2026-05-02 13:42:01] 2026-05-02 11:41:24,912 | INFO     | ***************************************
[2026-05-02 13:42:01] 2026-05-02 11:41:25,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 13:42:01] 2026-05-02 11:41:25,642 | INFO     | sufficient remaining disk space (496149463040 B)
[2026-05-02 13:42:01] 2026-05-02 11:41:25,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 13:42:01] 2026-05-02 11:41:25,642 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 13:42:01] 2026-05-02 11:41:25,642 | INFO     | update_server=False
[2026-05-02 13:42:01] 2026-05-02 11:41:25,642 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 13:42:01] 2026-05-02 11:41:25,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 13:42:01] 2026-05-02 11:41:25,643 | INFO     | aborting loop
[2026-05-02 13:42:01] 2026-05-02 11:41:25,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 13:42:01] 2026-05-02 11:41:25,954 | INFO     | all payload control threads have been joined
[2026-05-02 13:42:01] 2026-05-02 11:41:26,563 | INFO     | all data control threads have been joined
[2026-05-02 13:42:01] 2026-05-02 11:41:26,648 | INFO     | [job] retrieve thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:26,649 | INFO     | [job] job monitor thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:26,960 | INFO     | [payload] control thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 13:42:01] 2026-05-02 11:41:27,144 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,302 | INFO     | all job control threads have been joined
[2026-05-02 13:42:01] 2026-05-02 11:41:27,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 13:42:01] 2026-05-02 11:41:27,354 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,433 | INFO     | [payload] validate_post thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,510 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,569 | INFO     | [data] control thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,664 | INFO     | [payload] failed_post thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,799 | INFO     | [data] copytool_out thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:27,899 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:28,071 | INFO     | [job] validate thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:28,130 | INFO     | [data] copytool_in thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:28,308 | INFO     | [job] control thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:28,326 | INFO     | [job] queue monitor thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:31,060 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 13:42:01] 2026-05-02 11:41:45,421 | INFO     | [monitor] cgroup control has ended
[2026-05-02 13:42:01] 2026-05-02 11:41:46,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697018808128)>', '<ExcThread(monitor, started 139696260757248)>']
[2026-05-02 13:42:01] 2026-05-02 11:41:51,631 | INFO     | all workflow threads have been joined
[2026-05-02 13:42:01] 2026-05-02 11:41:51,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 13:42:01] 2026-05-02 11:41:51,631 | INFO     | traces error code: 0
[2026-05-02 13:42:01] 2026-05-02 11:41:51,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 13:42:01] 2026-05-02 11:41:55,640 | INFO     | PID=32381 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 13:42:01] 2026-05-02 11:41:55,640 | INFO     | .. there are 2 such processes running
[2026-05-02 13:42:01] 2026-05-02 11:41:55,641 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 13:42:01] 2026-05-02 11:41:55,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 13:42:01] 2026-05-02 11:41:55,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 13:42:01] 2026-05-02 11:41:55,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 13:42:01] 2026-05-02 11:41:55,641 | CRITICAL | thread 'MainThread' is not alive
[2026-05-02 13:42:01] 2026-05-02 11:41:55,641 | INFO     | [monitor] control thread has ended
[2026-05-02 13:42:01] 2026-05-02 11:41:56,043 [wrapper] ==== pilot stdout END ====
[2026-05-02 13:42:01] 2026-05-02 11:41:56,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 13:42:01] 2026-05-02 11:41:56,205 [wrapper] pilotpid: 32381
[2026-05-02 13:42:01] 2026-05-02 11:41:56,337 [wrapper] Pilot exit status: 0
[2026-05-02 13:42:01] 2026-05-02 11:41:56,932 [wrapper] pandaids: 7125349640
[2026-05-02 13:42:01] 2026-05-02 11:41:58,231 [wrapper] cleanup supervisor_pilot 11967 32382
[2026-05-02 13:42:01] 2026-05-02 11:41:58,321 [wrapper] Test setup, not cleaning
[2026-05-02 13:42:01] 2026-05-02 11:41:58,407 [wrapper] apfmon messages muted
[2026-05-02 13:42:01] 2026-05-02 11:41:58,495 [wrapper] ==== wrapper stdout END ====
[2026-05-02 13:42:01] 2026-05-02 11:41:58,586 [wrapper] ==== wrapper stderr END ====
[2026-05-02 13:42:01]  *** Error codes and diagnostics ***
[2026-05-02 13:42:01]     "exeErrorCode": 0,
[2026-05-02 13:42:01]     "pilotErrorCode": 0,
[2026-05-02 13:42:01]  *** Listing of results directory ***
[2026-05-02 13:42:01] total 490444
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc    683926 May  1 22:25 pilot3.tar.gz
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc      5631 May  1 22:27 queuedata.json
[2026-05-02 13:42:01] -rwx------. 1 boinc boinc     36322 May  1 22:27 runpilot2-wrapper.sh
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc       100 May  2 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 13:42:01] -rwxr-xr-x. 1 boinc boinc      7986 May  2 08:48 run_atlas
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc       105 May  2 08:48 job.xml
[2026-05-02 13:42:01] -rw-r--r--. 2 boinc boinc 319479137 May  2 08:48 EVNT.50016902._000044.pool.root.1
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc      6307 May  2 08:48 init_data.xml
[2026-05-02 13:42:01] -rw-r--r--. 2 boinc boinc     15667 May  2 08:48 start_atlas.sh
[2026-05-02 13:42:01] drwxrwx--x. 2 boinc boinc        68 May  2 08:48 shared
[2026-05-02 13:42:01] -rw-r--r--. 2 boinc boinc    697412 May  2 08:48 input.tar.gz
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc         0 May  2 08:48 boinc_lockfile
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc      2561 May  2 08:48 pandaJob.out
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc       415 May  2 08:55 workernode_map.json
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc   1002976 May  2 08:55 agis_schedconf.cvmfs.json
[2026-05-02 13:42:01] drwx------. 5 boinc boinc      4096 May  2 08:55 pilot3
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc 174618058 May  2 13:39 HITS.50016906._001115.pool.root.1
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc       489 May  2 13:40 boinc_task_state.xml
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc      1011 May  2 13:41 memory_monitor_summary.json
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc   1508687 May  2 13:41 agis_ddmendpoints.agis.ALL.json
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc        95 May  2 13:41 pilot_heartbeat.json
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc    417002 May  2 13:41 log.50016906._001115.job.log.tgz.1
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc      6333 May  2 13:41 heartbeat_new.json
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc      6224 May  2 13:41 heartbeat.json
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc      8192 May  2 13:41 boinc_mmap_file
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc        28 May  2 13:41 wrapper_checkpoint.txt
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc       890 May  2 13:41 pilotlog.txt
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc   1587601 May  2 13:41 log.50016906._001115.job.log.1
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc       357 May  2 13:42 output.list
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc       410 May  2 13:42 runtime_log
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc   2017280 May  2 13:42 result.tar.gz
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc      8439 May  2 13:42 runtime_log.err
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc       656 May  2 13:42 0ca843d715f4.diag
[2026-05-02 13:42:01] -rw-r--r--. 1 boinc boinc     20429 May  2 13:42 stderr.txt
[2026-05-02 13:42:01] HITS file was successfully produced:
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc 174618058 May  2 13:39 shared/HITS.pool.root.1
[2026-05-02 13:42:01]  *** Contents of shared directory: ***
[2026-05-02 13:42:01] total 485192
[2026-05-02 13:42:01] -rw-r--r--. 2 boinc boinc 319479137 May  2 08:48 ATLAS.root_0
[2026-05-02 13:42:01] -rw-r--r--. 2 boinc boinc     15667 May  2 08:48 start_atlas.sh
[2026-05-02 13:42:01] -rw-r--r--. 2 boinc boinc    697412 May  2 08:48 input.tar.gz
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc 174618058 May  2 13:39 HITS.pool.root.1
[2026-05-02 13:42:01] -rw-------. 1 boinc boinc   2017280 May  2 13:42 result.tar.gz
13:42:03 (28401): run_atlas exited; CPU time 63798.460015
13:42:03 (28401): called boinc_finish(0)

</stderr_txt>
]]>

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