Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:34:50 (1931646): wrapper (7.7.26015): starting
22:34:50 (1931646): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 22:34:50] Arguments: --nthreads 4
[2026-05-04 22:34:50] Threads: 4
[2026-05-04 22:34:50] Checking for CVMFS
[2026-05-04 22:34:50] No cvmfs_config command found, will try listing directly
[2026-05-04 22:34:50] CVMFS is ok
[2026-05-04 22:34:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 22:34:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 22:34:50] Further information can be found at the LHC@home message board.
[2026-05-04 22:34:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 22:34:50] Checking for apptainer binary...
[2026-05-04 22:34:50] which: no apptainer in ((null))
[2026-05-04 22:34:50] apptainer is not installed, using version from CVMFS
[2026-05-04 22:34:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 22:34:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-04 22:34:50] apptainer works
[2026-05-04 22:34:50] Set ATHENA_PROC_NUMBER=4
[2026-05-04 22:34:50] Set ATHENA_CORE_NUMBER=4
[2026-05-04 22:34:50] Starting ATLAS job with PandaID=7122742656
[2026-05-04 22:34:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 02:21:43]  *** The last 200 lines of the pilot log: ***
[2026-05-05 02:21:43] 2026-05-05 00:20:37,059 | INFO     | log transfer has been attempted: DONE
[2026-05-05 02:21:43] 2026-05-05 00:20:37,059 | INFO     | job 7122742656 has finished - writing final server update
[2026-05-05 02:21:43] 2026-05-05 00:20:37,059 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3050777/.job.ad'
[2026-05-05 02:21:43] 2026-05-05 00:20:37,060 | INFO     | total number of processed events: 400 (read)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,091 | INFO     | using path: /var/lib/boinc/var/slot100/slots/0/PanDA_Pilot-7122742656/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,092 | INFO     | extracted standard info from prmon json
[2026-05-05 02:21:43] 2026-05-05 00:20:37,092 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 02:21:43] 2026-05-05 00:20:37,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 02:21:43] 2026-05-05 00:20:37,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 02:21:43] 2026-05-05 00:20:37,097 | INFO     | fitting pss+swap vs Time
[2026-05-05 02:21:43] 2026-05-05 00:20:37,098 | INFO     | sum of square deviations: 3392565905.4954906
[2026-05-05 02:21:43] 2026-05-05 00:20:37,099 | INFO     | sum of deviations: -5568228529.927925
[2026-05-05 02:21:43] 2026-05-05 00:20:37,100 | INFO     | mean x (centered): 0.0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,100 | INFO     | mean y: 2318380.427927928
[2026-05-05 02:21:43] 2026-05-05 00:20:37,100 | INFO     | intersect: 2318380.427927928
[2026-05-05 02:21:43] 2026-05-05 00:20:37,100 | INFO     | chi2: 2.148295420561082
[2026-05-05 02:21:43] 2026-05-05 00:20:37,100 | INFO     | sum of square deviations: 3168459682.9953957
[2026-05-05 02:21:43] 2026-05-05 00:20:37,102 | INFO     | sum of deviations: 8165130490.105993
[2026-05-05 02:21:43] 2026-05-05 00:20:37,102 | INFO     | mean x (centered): 0.0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,102 | INFO     | mean y: 2327553.8940092167
[2026-05-05 02:21:43] 2026-05-05 00:20:37,102 | INFO     | intersect: 2327553.8940092167
[2026-05-05 02:21:43] 2026-05-05 00:20:37,103 | INFO     | chi2: 1.359290374606123
[2026-05-05 02:21:43] 2026-05-05 00:20:37,103 | INFO     | current chi2=1.359290374606123 (change=36.72702731679661 %)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,103 | INFO     | sum of square deviations: 2954446672.9952765
[2026-05-05 02:21:43] 2026-05-05 00:20:37,104 | INFO     | sum of deviations: 7868477788.985852
[2026-05-05 02:21:43] 2026-05-05 00:20:37,104 | INFO     | mean x (centered): 0.0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,105 | INFO     | mean y: 2327342.5141509436
[2026-05-05 02:21:43] 2026-05-05 00:20:37,105 | INFO     | intersect: 2327342.5141509436
[2026-05-05 02:21:43] 2026-05-05 00:20:37,105 | INFO     | chi2: 1.3596580684970048
[2026-05-05 02:21:43] 2026-05-05 00:20:37,105 | INFO     | current chi2=1.3596580684970048 (change=-0.027050429970742345 %)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,105 | INFO     | right removable region: 211
[2026-05-05 02:21:43] 2026-05-05 00:20:37,106 | INFO     | sum of square deviations: 3168459072.9953957
[2026-05-05 02:21:43] 2026-05-05 00:20:37,107 | INFO     | sum of deviations: -31968219192.036896
[2026-05-05 02:21:43] 2026-05-05 00:20:37,107 | INFO     | mean x (centered): 0.0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,107 | INFO     | mean y: 2336111.0368663594
[2026-05-05 02:21:43] 2026-05-05 00:20:37,107 | INFO     | intersect: 2336111.0368663594
[2026-05-05 02:21:43] 2026-05-05 00:20:37,108 | INFO     | chi2: 0.8606594131643082
[2026-05-05 02:21:43] 2026-05-05 00:20:37,108 | INFO     | current chi2=0.8606594131643082 (change=59.93756701582853 %)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,108 | INFO     | sum of square deviations: 2954445452.9952765
[2026-05-05 02:21:43] 2026-05-05 00:20:37,110 | INFO     | sum of deviations: -27409805104.268867
[2026-05-05 02:21:43] 2026-05-05 00:20:37,110 | INFO     | mean x (centered): 0.0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,110 | INFO     | mean y: 2332859.7688679243
[2026-05-05 02:21:43] 2026-05-05 00:20:37,110 | INFO     | intersect: 2332859.7688679243
[2026-05-05 02:21:43] 2026-05-05 00:20:37,110 | INFO     | chi2: 0.8531985775825216
[2026-05-05 02:21:43] 2026-05-05 00:20:37,110 | INFO     | current chi2=0.8531985775825216 (change=0.8668743370105007 %)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,111 | INFO     | left removable region: 10
[2026-05-05 02:21:43] 2026-05-05 00:20:37,111 | INFO     | sum of square deviations: 2517998870.995033
[2026-05-05 02:21:43] 2026-05-05 00:20:37,112 | INFO     | sum of deviations: -13575603452.22886
[2026-05-05 02:21:43] 2026-05-05 00:20:37,112 | INFO     | mean x (centered): 0.0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,112 | INFO     | mean y: 2343015.228855721
[2026-05-05 02:21:43] 2026-05-05 00:20:37,113 | INFO     | intersect: 2343015.228855721
[2026-05-05 02:21:43] 2026-05-05 00:20:37,113 | INFO     | chi2: 0.04350394790233668
[2026-05-05 02:21:43] 2026-05-05 00:20:37,113 | INFO     | current memory leak: -5.39 B/s (using 201 data points, chi2=0.04)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,115 | INFO     | could have reported an average CPU frequency of 2685 MHz (11 samples)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,116 | INFO     | ..............................
[2026-05-05 02:21:43] 2026-05-05 00:20:37,116 | INFO     | . Timing measurements:
[2026-05-05 02:21:43] 2026-05-05 00:20:37,116 | INFO     | . get job = 0 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | . initial setup = 8 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | . payload setup = 15 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | . stage-in = 0 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | . payload execution = 13488 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | . stage-out = 1 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | . log creation = 0 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,117 | INFO     | ..............................
[2026-05-05 02:21:43] 2026-05-05 00:20:37,284 | INFO     | PID=1936263 has CPU usage=19.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 02:21:43] 2026-05-05 00:20:37,285 | INFO     | .. there are 25 such processes running
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | 
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | job summary report
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | --------------------------------------------------
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | PanDA job id: 7122742656
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | task id: 49645815
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | errors: (none)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 02:21:43] 2026-05-05 00:20:37,401 | INFO     | pilot state: finished 
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | transexitcode: 0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | exeerrorcode: 0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | exeerrordiag: 
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | exitcode: 0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | exitmsg: OK
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | cpuconsumptiontime: 50855 s
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | nevents: 400
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | neventsw: 0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | pid: 1941686
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | pgrp: 1941686
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | corecount: 4
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | event service: False
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | sizes: {0: 2270664, 1: 2272294, 11: 2272322, 13507: 2303346, 13509: 2312368, 13510: 2312424, 13512: 2312746}
[2026-05-05 02:21:43] 2026-05-05 00:20:37,402 | INFO     | --------------------------------------------------
[2026-05-05 02:21:43] 2026-05-05 00:20:37,403 | INFO     | 
[2026-05-05 02:21:43] 2026-05-05 00:20:37,403 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/0
[2026-05-05 02:21:43] 2026-05-05 00:20:37,437 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,437 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,437 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,437 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | job 7122742656 has completed (purged errors)
[2026-05-05 02:21:43] 2026-05-05 00:20:37,439 | INFO     | overall cleanup function is called
[2026-05-05 02:21:43] 2026-05-05 00:20:38,448 | INFO     | --- collectZombieJob: --- 10, [1941686]
[2026-05-05 02:21:43] 2026-05-05 00:20:38,449 | INFO     | zombie collector waiting for pid 1941686
[2026-05-05 02:21:43] 2026-05-05 00:20:38,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 02:21:43] 2026-05-05 00:20:38,449 | INFO     | collected zombie processes
[2026-05-05 02:21:43] 2026-05-05 00:20:38,449 | INFO     | will attempt to kill all subprocesses of pid=1941686
[2026-05-05 02:21:43] 2026-05-05 00:20:39,150 | INFO     | process IDs to be killed: [1941686] (in reverse order)
[2026-05-05 02:21:43] 2026-05-05 00:20:39,513 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 02:21:43] 2026-05-05 00:20:39,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 02:21:43] 2026-05-05 00:20:39,547 | INFO     | did not find any defunct processes belonging to 1941686
[2026-05-05 02:21:43] 2026-05-05 00:20:39,575 | INFO     | did not find any defunct processes belonging to 1941686
[2026-05-05 02:21:43] 2026-05-05 00:20:39,575 | INFO     | Ready for new job
[2026-05-05 02:21:43] 2026-05-05 00:20:39,578 | INFO     | ***************************************
[2026-05-05 02:21:43] 2026-05-05 00:20:39,578 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 02:21:43] 2026-05-05 00:20:39,578 | INFO     | ***************************************
[2026-05-05 02:21:43] 2026-05-05 00:20:39,578 | INFO     | 
[2026-05-05 02:21:43] 2026-05-05 00:20:39,587 | INFO     | architecture information:
[2026-05-05 02:21:43] 2026-05-05 00:20:39,587 | INFO     | executing command: cat /etc/os-release
[2026-05-05 02:21:43] 2026-05-05 00:20:39,613 | INFO     | cat /etc/os-release:
[2026-05-05 02:21:43] NAME="CentOS Linux"
[2026-05-05 02:21:43] VERSION="7 (Core)"
[2026-05-05 02:21:43] ID="centos"
[2026-05-05 02:21:43] ID_LIKE="rhel fedora"
[2026-05-05 02:21:43] VERSION_ID="7"
[2026-05-05 02:21:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 02:21:43] ANSI_COLOR="0;31"
[2026-05-05 02:21:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 02:21:43] HOME_URL="https://www.centos.org/"
[2026-05-05 02:21:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 02:21:43] 
[2026-05-05 02:21:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 02:21:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 02:21:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 02:21:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 02:21:43] 
[2026-05-05 02:21:43] 2026-05-05 00:20:39,613 | INFO     | ***************************************
[2026-05-05 02:21:43] 2026-05-05 00:20:40,117 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/0
[2026-05-05 02:21:43] 2026-05-05 00:20:40,140 | INFO     | sufficient remaining disk space (260735762432 B)
[2026-05-05 02:21:43] 2026-05-05 00:20:40,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 02:21:43] 2026-05-05 00:20:40,141 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 02:21:43] 2026-05-05 00:20:40,141 | INFO     | update_server=False
[2026-05-05 02:21:43] 2026-05-05 00:20:40,141 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 02:21:43] 2026-05-05 00:20:40,297 | INFO     | all payload control threads have been joined
[2026-05-05 02:21:43] 2026-05-05 00:20:40,304 | INFO     | all job control threads have been joined
[2026-05-05 02:21:43] 2026-05-05 00:20:40,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 02:21:43] 2026-05-05 00:20:40,406 | INFO     | aborting loop
[2026-05-05 02:21:43] 2026-05-05 00:20:41,127 | INFO     | all data control threads have been joined
[2026-05-05 02:21:43] 2026-05-05 00:20:41,145 | INFO     | [job] retrieve thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:41,310 | INFO     | [job] control thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:41,311 | INFO     | [payload] control thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:41,370 | INFO     | [payload] validate_post thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:41,410 | INFO     | [job] job monitor thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:41,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 02:21:43] 2026-05-05 00:20:41,509 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:41,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 02:21:43] 2026-05-05 00:20:41,868 | INFO     | [job] validate thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:42,094 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:42,119 | INFO     | [data] copytool_in thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:42,132 | INFO     | [data] control thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:42,257 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:42,261 | INFO     | [payload] failed_post thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:42,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 02:21:43] 2026-05-05 00:20:42,346 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:43,289 | INFO     | [job] queue monitor thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:43,645 | INFO     | [data] copytool_out thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:20:45,449 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 02:21:43] 2026-05-05 00:21:10,377 | INFO     | PID=1936263 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 02:21:43] 2026-05-05 00:21:10,377 | INFO     | .. there are 25 such processes running
[2026-05-05 02:21:43] 2026-05-05 00:21:10,378 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 02:21:43] 2026-05-05 00:21:10,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 02:21:43] 2026-05-05 00:21:10,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 02:21:43] 2026-05-05 00:21:35,987 | INFO     | [monitor] cgroup control has ended
[2026-05-05 02:21:43] 2026-05-05 00:21:37,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22596465850176)>', '<ExcThread(monitor, started 22596231120640)>']
[2026-05-05 02:21:43] 2026-05-05 00:21:38,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 02:21:43] 2026-05-05 00:21:38,523 | INFO     | [monitor] control thread has ended
[2026-05-05 02:21:43] 2026-05-05 00:21:42,797 | INFO     | all workflow threads have been joined
[2026-05-05 02:21:43] 2026-05-05 00:21:42,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 02:21:43] 2026-05-05 00:21:42,798 | INFO     | traces error code: 0
[2026-05-05 02:21:43] 2026-05-05 00:21:42,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 02:21:43] 2026-05-05 00:21:42,949 [wrapper] ==== pilot stdout END ====
[2026-05-05 02:21:43] 2026-05-05 00:21:42,961 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 02:21:43] 2026-05-05 00:21:42,965 [wrapper] pilotpid: 1936263
[2026-05-05 02:21:43] 2026-05-05 00:21:42,973 [wrapper] Pilot exit status: 0
[2026-05-05 02:21:43] 2026-05-05 00:21:43,071 [wrapper] pandaids: 7122742656
[2026-05-05 02:21:43] 2026-05-05 00:21:43,320 [wrapper] cleanup supervisor_pilot 2645708 1936264
[2026-05-05 02:21:43] 2026-05-05 00:21:43,348 [wrapper] Test setup, not cleaning
[2026-05-05 02:21:43] 2026-05-05 00:21:43,394 [wrapper] apfmon messages muted
[2026-05-05 02:21:43] 2026-05-05 00:21:43,411 [wrapper] ==== wrapper stdout END ====
[2026-05-05 02:21:43] 2026-05-05 00:21:43,436 [wrapper] ==== wrapper stderr END ====
[2026-05-05 02:21:43]  *** Error codes and diagnostics ***
[2026-05-05 02:21:43]     "exeErrorCode": 0,
[2026-05-05 02:21:43]     "pilotErrorCode": 0,
[2026-05-05 02:21:43]  *** Listing of results directory ***
[2026-05-05 02:21:43] total 416240
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc    683926 May  1 21:08 pilot3.tar.gz
[2026-05-05 02:21:43] -rwx------. 1 boinc boinc     36322 May  1 21:10 runpilot2-wrapper.sh
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc      5631 May  1 21:10 queuedata.json
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc       100 May  4 22:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 02:21:43] -rwxr-xr-x. 1 boinc boinc      7986 May  4 22:34 run_atlas
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc       105 May  4 22:34 job.xml
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc      6542 May  4 22:34 init_data.xml
[2026-05-05 02:21:43] -rw-r--r--. 2 boinc boinc 223618144 May  4 22:34 EVNT.48629115._000356.pool.root.1
[2026-05-05 02:21:43] -rw-r--r--. 2 boinc boinc     15667 May  4 22:34 start_atlas.sh
[2026-05-05 02:21:43] drwxrwx--x. 2 boinc boinc      4096 May  4 22:34 shared
[2026-05-05 02:21:43] -rw-r--r--. 2 boinc boinc    697440 May  4 22:34 input.tar.gz
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc         0 May  4 22:34 boinc_lockfile
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc      2627 May  4 22:34 pandaJob.out
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc   1002597 May  4 22:35 agis_schedconf.cvmfs.json
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc       444 May  4 22:35 workernode_map.json
[2026-05-05 02:21:43] drwx------. 5 boinc boinc      4096 May  4 22:35 pilot3
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc 195335494 May  5 02:19 HITS.49645815._024639.pool.root.1
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc        95 May  5 02:20 pilot_heartbeat.json
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc       488 May  5 02:20 boinc_task_state.xml
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc      1039 May  5 02:20 memory_monitor_summary.json
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc   1505918 May  5 02:20 agis_ddmendpoints.agis.ALL.json
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc    323400 May  5 02:20 log.49645815._024639.job.log.tgz.1
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc      6375 May  5 02:20 heartbeat_new.json
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc      6266 May  5 02:20 heartbeat.json
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc        28 May  5 02:21 wrapper_checkpoint.txt
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc      8192 May  5 02:21 boinc_mmap_file
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc      4834 May  5 02:21 pilotlog.txt
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc   1246207 May  5 02:21 log.49645815._024639.job.log.1
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc       357 May  5 02:21 output.list
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc       410 May  5 02:21 runtime_log
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc   1587200 May  5 02:21 result.tar.gz
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc      8845 May  5 02:21 runtime_log.err
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc       666 May  5 02:21 fa933d94a293.diag
[2026-05-05 02:21:43] -rw-r--r--. 1 boinc boinc     20971 May  5 02:21 stderr.txt
[2026-05-05 02:21:43] HITS file was successfully produced:
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc 195335494 May  5 02:19 shared/HITS.pool.root.1
[2026-05-05 02:21:43]  *** Contents of shared directory: ***
[2026-05-05 02:21:43] total 411400
[2026-05-05 02:21:43] -rw-r--r--. 2 boinc boinc 223618144 May  4 22:34 ATLAS.root_0
[2026-05-05 02:21:43] -rw-r--r--. 2 boinc boinc     15667 May  4 22:34 start_atlas.sh
[2026-05-05 02:21:43] -rw-r--r--. 2 boinc boinc    697440 May  4 22:34 input.tar.gz
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc 195335494 May  5 02:19 HITS.pool.root.1
[2026-05-05 02:21:43] -rw-------. 1 boinc boinc   1587200 May  5 02:21 result.tar.gz
02:21:45 (1931646): run_atlas exited; CPU time 51695.622757
02:21:45 (1931646): called boinc_finish(0)

</stderr_txt>
]]>

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