Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:01:20 (1871934): wrapper (7.7.26015): starting
14:01:20 (1871934): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 14:01:20] Arguments: --nthreads 4
[2026-05-03 14:01:20] Threads: 4
[2026-05-03 14:01:20] Checking for CVMFS
[2026-05-03 14:01:20] No cvmfs_config command found, will try listing directly
[2026-05-03 14:01:20] CVMFS is ok
[2026-05-03 14:01:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 14:01:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 14:01:20] Further information can be found at the LHC@home message board.
[2026-05-03 14:01:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 14:01:20] Checking for apptainer binary...
[2026-05-03 14:01:20] which: no apptainer in ((null))
[2026-05-03 14:01:20] apptainer is not installed, using version from CVMFS
[2026-05-03 14:01:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 14:01:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-03 14:01:20] apptainer works
[2026-05-03 14:01:20] Set ATHENA_PROC_NUMBER=4
[2026-05-03 14:01:20] Set ATHENA_CORE_NUMBER=4
[2026-05-03 14:01:20] Starting ATLAS job with PandaID=7122741291
[2026-05-03 14:01:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 18:23:09]  *** The last 200 lines of the pilot log: ***
[2026-05-03 18:23:09] 2026-05-03 16:22:35,584 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,584 | INFO     | log transfer has been attempted: DONE
[2026-05-03 18:23:09] 2026-05-03 16:22:35,584 | INFO     | job 7122741291 has finished - writing final server update
[2026-05-03 18:23:09] 2026-05-03 16:22:35,584 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3319626/.job.ad'
[2026-05-03 18:23:09] 2026-05-03 16:22:35,584 | INFO     | total number of processed events: 400 (read)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,596 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7122741291/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,597 | INFO     | extracted standard info from prmon json
[2026-05-03 18:23:09] 2026-05-03 16:22:35,597 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 18:23:09] 2026-05-03 16:22:35,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 18:23:09] 2026-05-03 16:22:35,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 18:23:09] 2026-05-03 16:22:35,605 | INFO     | fitting pss+swap vs Time
[2026-05-03 18:23:09] 2026-05-03 16:22:35,606 | INFO     | sum of square deviations: 5263458688.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,607 | INFO     | sum of deviations: 27694645197.000004
[2026-05-03 18:23:09] 2026-05-03 16:22:35,608 | INFO     | mean x (centered): 0.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,608 | INFO     | mean y: 2305250.961089494
[2026-05-03 18:23:09] 2026-05-03 16:22:35,608 | INFO     | intersect: 2305250.961089494
[2026-05-03 18:23:09] 2026-05-03 16:22:35,608 | INFO     | chi2: 2.059870009545114
[2026-05-03 18:23:09] 2026-05-03 16:22:35,609 | INFO     | sum of square deviations: 4962187923.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,610 | INFO     | sum of deviations: 41622457326.00001
[2026-05-03 18:23:09] 2026-05-03 16:22:35,610 | INFO     | mean x (centered): 0.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,611 | INFO     | mean y: 2312182.880952381
[2026-05-03 18:23:09] 2026-05-03 16:22:35,611 | INFO     | intersect: 2312182.880952381
[2026-05-03 18:23:09] 2026-05-03 16:22:35,611 | INFO     | chi2: 1.387771193270262
[2026-05-03 18:23:09] 2026-05-03 16:22:35,611 | INFO     | current chi2=1.387771193270262 (change=32.62821504077692 %)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,612 | INFO     | sum of square deviations: 4672638308.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,613 | INFO     | sum of deviations: 40508483927.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,613 | INFO     | mean x (centered): 0.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,613 | INFO     | mean y: 2311596.068825911
[2026-05-03 18:23:09] 2026-05-03 16:22:35,613 | INFO     | intersect: 2311596.068825911
[2026-05-03 18:23:09] 2026-05-03 16:22:35,614 | INFO     | chi2: 1.3881987996393055
[2026-05-03 18:23:09] 2026-05-03 16:22:35,614 | INFO     | current chi2=1.3881987996393055 (change=-0.03081245461189666 %)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,614 | INFO     | right removable region: 246
[2026-05-03 18:23:09] 2026-05-03 16:22:35,614 | INFO     | sum of square deviations: 4962187923.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,616 | INFO     | sum of deviations: -7412565486.999999
[2026-05-03 18:23:09] 2026-05-03 16:22:35,616 | INFO     | mean x (centered): 0.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,616 | INFO     | mean y: 2322858.087301587
[2026-05-03 18:23:09] 2026-05-03 16:22:35,616 | INFO     | intersect: 2322858.087301587
[2026-05-03 18:23:09] 2026-05-03 16:22:35,617 | INFO     | chi2: 0.6893387640340145
[2026-05-03 18:23:09] 2026-05-03 16:22:35,617 | INFO     | current chi2=0.6893387640340145 (change=66.53484147835897 %)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,617 | INFO     | sum of square deviations: 4672638308.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,619 | INFO     | sum of deviations: -7534703041.999999
[2026-05-03 18:23:09] 2026-05-03 16:22:35,619 | INFO     | mean x (centered): 0.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,619 | INFO     | mean y: 2322912.805668016
[2026-05-03 18:23:09] 2026-05-03 16:22:35,619 | INFO     | intersect: 2322912.805668016
[2026-05-03 18:23:09] 2026-05-03 16:22:35,620 | INFO     | chi2: 0.6868597192147982
[2026-05-03 18:23:09] 2026-05-03 16:22:35,620 | INFO     | current chi2=0.6868597192147982 (change=0.35962649259835067 %)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,620 | INFO     | left removable region: 10
[2026-05-03 18:23:09] 2026-05-03 16:22:35,620 | INFO     | sum of square deviations: 4075741535.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,622 | INFO     | sum of deviations: 6048777415.499999
[2026-05-03 18:23:09] 2026-05-03 16:22:35,622 | INFO     | mean x (centered): 0.0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,622 | INFO     | mean y: 2330222.2669491526
[2026-05-03 18:23:09] 2026-05-03 16:22:35,622 | INFO     | intersect: 2330222.2669491526
[2026-05-03 18:23:09] 2026-05-03 16:22:35,622 | INFO     | chi2: 0.001957381721534888
[2026-05-03 18:23:09] 2026-05-03 16:22:35,622 | INFO     | current memory leak: 1.48 B/s (using 236 data points, chi2=0.00)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,623 | INFO     | could have reported an average CPU frequency of 2582 MHz (12 samples)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,623 | INFO     | ..............................
[2026-05-03 18:23:09] 2026-05-03 16:22:35,623 | INFO     | . Timing measurements:
[2026-05-03 18:23:09] 2026-05-03 16:22:35,623 | INFO     | . get job = 0 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,623 | INFO     | . initial setup = 6 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,623 | INFO     | . payload setup = 10 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,624 | INFO     | . stage-in = 0 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,624 | INFO     | . payload execution = 15629 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,624 | INFO     | . stage-out = 1 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,624 | INFO     | . log creation = 0 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,624 | INFO     | ..............................
[2026-05-03 18:23:09] 2026-05-03 16:22:35,723 | INFO     | 
[2026-05-03 18:23:09] 2026-05-03 16:22:35,723 | INFO     | job summary report
[2026-05-03 18:23:09] 2026-05-03 16:22:35,723 | INFO     | --------------------------------------------------
[2026-05-03 18:23:09] 2026-05-03 16:22:35,723 | INFO     | PanDA job id: 7122741291
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | task id: 49645815
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | errors: (none)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | pilot state: finished 
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | transexitcode: 0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | exeerrorcode: 0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | exeerrordiag: 
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | exitcode: 0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | exitmsg: OK
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | cpuconsumptiontime: 57878 s
[2026-05-03 18:23:09] 2026-05-03 16:22:35,724 | INFO     | nevents: 400
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | neventsw: 0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | pid: 1881183
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | pgrp: 1881183
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | corecount: 4
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | event service: False
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | sizes: {0: 2275412, 1: 2277241, 11: 2277241, 15644: 2308323, 15645: 2317399, 15648: 2317537}
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | --------------------------------------------------
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | 
[2026-05-03 18:23:09] 2026-05-03 16:22:35,725 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-03 18:23:09] 2026-05-03 16:22:35,753 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | job 7122741291 has completed (purged errors)
[2026-05-03 18:23:09] 2026-05-03 16:22:35,755 | INFO     | overall cleanup function is called
[2026-05-03 18:23:09] 2026-05-03 16:22:36,763 | INFO     | --- collectZombieJob: --- 10, [1881183]
[2026-05-03 18:23:09] 2026-05-03 16:22:36,763 | INFO     | zombie collector waiting for pid 1881183
[2026-05-03 18:23:09] 2026-05-03 16:22:36,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 18:23:09] 2026-05-03 16:22:36,764 | INFO     | collected zombie processes
[2026-05-03 18:23:09] 2026-05-03 16:22:36,764 | INFO     | will attempt to kill all subprocesses of pid=1881183
[2026-05-03 18:23:09] 2026-05-03 16:22:37,105 | INFO     | process IDs to be killed: [1881183] (in reverse order)
[2026-05-03 18:23:09] 2026-05-03 16:22:37,235 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 18:23:09] 2026-05-03 16:22:37,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 18:23:09] 2026-05-03 16:22:37,247 | INFO     | did not find any defunct processes belonging to 1881183
[2026-05-03 18:23:09] 2026-05-03 16:22:37,259 | INFO     | did not find any defunct processes belonging to 1881183
[2026-05-03 18:23:09] 2026-05-03 16:22:37,259 | INFO     | Ready for new job
[2026-05-03 18:23:09] 2026-05-03 16:22:37,261 | INFO     | ***************************************
[2026-05-03 18:23:09] 2026-05-03 16:22:37,261 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 18:23:09] 2026-05-03 16:22:37,261 | INFO     | ***************************************
[2026-05-03 18:23:09] 2026-05-03 16:22:37,261 | INFO     | 
[2026-05-03 18:23:09] 2026-05-03 16:22:37,269 | INFO     | architecture information:
[2026-05-03 18:23:09] 2026-05-03 16:22:37,269 | INFO     | executing command: cat /etc/os-release
[2026-05-03 18:23:09] 2026-05-03 16:22:37,289 | INFO     | cat /etc/os-release:
[2026-05-03 18:23:09] NAME="CentOS Linux"
[2026-05-03 18:23:09] VERSION="7 (Core)"
[2026-05-03 18:23:09] ID="centos"
[2026-05-03 18:23:09] ID_LIKE="rhel fedora"
[2026-05-03 18:23:09] VERSION_ID="7"
[2026-05-03 18:23:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 18:23:09] ANSI_COLOR="0;31"
[2026-05-03 18:23:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 18:23:09] HOME_URL="https://www.centos.org/"
[2026-05-03 18:23:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 18:23:09] 
[2026-05-03 18:23:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 18:23:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 18:23:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 18:23:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 18:23:09] 
[2026-05-03 18:23:09] 2026-05-03 16:22:37,290 | INFO     | ***************************************
[2026-05-03 18:23:09] 2026-05-03 16:22:37,792 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-03 18:23:09] 2026-05-03 16:22:37,822 | INFO     | sufficient remaining disk space (46041923584 B)
[2026-05-03 18:23:09] 2026-05-03 16:22:37,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 18:23:09] 2026-05-03 16:22:37,822 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 18:23:09] 2026-05-03 16:22:37,822 | INFO     | update_server=False
[2026-05-03 18:23:09] 2026-05-03 16:22:37,823 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 18:23:09] 2026-05-03 16:22:37,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 18:23:09] 2026-05-03 16:22:37,823 | INFO     | aborting loop
[2026-05-03 18:23:09] 2026-05-03 16:22:37,897 | INFO     | all job control threads have been joined
[2026-05-03 18:23:09] 2026-05-03 16:22:37,946 | INFO     | all payload control threads have been joined
[2026-05-03 18:23:09] 2026-05-03 16:22:38,065 | INFO     | all data control threads have been joined
[2026-05-03 18:23:09] 2026-05-03 16:22:38,071 | INFO     | job.realtimelogging is not enabled
[2026-05-03 18:23:09] 2026-05-03 16:22:38,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 18:23:09] 2026-05-03 16:22:38,827 | INFO     | [job] retrieve thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:38,828 | INFO     | [job] job monitor thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:38,902 | INFO     | [job] control thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:38,951 | INFO     | [payload] control thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,021 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,022 | INFO     | [job] validate thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,022 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,070 | INFO     | [data] control thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,076 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,309 | INFO     | [payload] validate_post thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:39,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 18:23:09] 2026-05-03 16:22:39,563 | INFO     | [data] copytool_in thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:40,035 | INFO     | [payload] failed_post thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:40,295 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:40,715 | INFO     | [data] copytool_out thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:40,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 18:23:09] 2026-05-03 16:22:41,738 | INFO     | [job] queue monitor thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:22:43,344 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 18:23:09] 2026-05-03 16:23:02,681 | INFO     | [monitor] cgroup control has ended
[2026-05-03 18:23:09] 2026-05-03 16:23:03,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23395623675712)>', '<ExcThread(monitor, started 23395382331136)>']
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | INFO     | PID=1875725 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | INFO     | .. there are 13 such processes running
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 18:23:09] 2026-05-03 16:23:08,540 | INFO     | [monitor] control thread has ended
[2026-05-03 18:23:09] 2026-05-03 16:23:08,973 | INFO     | all workflow threads have been joined
[2026-05-03 18:23:09] 2026-05-03 16:23:08,973 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 18:23:09] 2026-05-03 16:23:08,974 | INFO     | traces error code: 0
[2026-05-03 18:23:09] 2026-05-03 16:23:08,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 18:23:09] 2026-05-03 16:23:09,124 [wrapper] ==== pilot stdout END ====
[2026-05-03 18:23:09] 2026-05-03 16:23:09,127 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 18:23:09] 2026-05-03 16:23:09,131 [wrapper] pilotpid: 1875725
[2026-05-03 18:23:09] 2026-05-03 16:23:09,140 [wrapper] Pilot exit status: 0
[2026-05-03 18:23:09] 2026-05-03 16:23:09,247 [wrapper] pandaids: 7122741291
[2026-05-03 18:23:09] 2026-05-03 16:23:09,352 [wrapper] cleanup supervisor_pilot 2231129 1875726
[2026-05-03 18:23:09] 2026-05-03 16:23:09,358 [wrapper] Test setup, not cleaning
[2026-05-03 18:23:09] 2026-05-03 16:23:09,362 [wrapper] apfmon messages muted
[2026-05-03 18:23:09] 2026-05-03 16:23:09,369 [wrapper] ==== wrapper stdout END ====
[2026-05-03 18:23:09] 2026-05-03 16:23:09,376 [wrapper] ==== wrapper stderr END ====
[2026-05-03 18:23:09]  *** Error codes and diagnostics ***
[2026-05-03 18:23:09]     "exeErrorCode": 0,
[2026-05-03 18:23:09]     "pilotErrorCode": 0,
[2026-05-03 18:23:09]  *** Listing of results directory ***
[2026-05-03 18:23:09] total 422048
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc    683926 May  1 21:08 pilot3.tar.gz
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc      5631 May  1 21:08 queuedata.json
[2026-05-03 18:23:09] -rwx------. 1 boinc boinc     36322 May  1 21:09 runpilot2-wrapper.sh
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc       100 May  3 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 18:23:09] -rwxr-xr-x. 1 boinc boinc      7986 May  3 14:01 run_atlas
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc       105 May  3 14:01 job.xml
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc      6482 May  3 14:01 init_data.xml
[2026-05-03 18:23:09] -rw-r--r--. 2 boinc boinc 226684437 May  3 14:01 EVNT.48629115._000205.pool.root.1
[2026-05-03 18:23:09] -rw-r--r--. 2 boinc boinc     15667 May  3 14:01 start_atlas.sh
[2026-05-03 18:23:09] drwxrwx--x. 2 boinc boinc      4096 May  3 14:01 shared
[2026-05-03 18:23:09] -rw-r--r--. 2 boinc boinc    697444 May  3 14:01 input.tar.gz
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc         0 May  3 14:01 boinc_lockfile
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc      2627 May  3 14:01 pandaJob.out
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc   1002968 May  3 14:01 agis_schedconf.cvmfs.json
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc       452 May  3 14:01 workernode_map.json
[2026-05-03 18:23:09] drwx------. 5 boinc boinc      4096 May  3 14:01 pilot3
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc 197708867 May  3 18:21 HITS.49645815._024328.pool.root.1
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc       488 May  3 18:22 boinc_task_state.xml
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc        95 May  3 18:22 pilot_heartbeat.json
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc      1036 May  3 18:22 memory_monitor_summary.json
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc   1508687 May  3 18:22 agis_ddmendpoints.agis.ALL.json
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc    365382 May  3 18:22 log.49645815._024328.job.log.tgz.1
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc      6422 May  3 18:22 heartbeat_new.json
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc      6313 May  3 18:22 heartbeat.json
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc      8192 May  3 18:22 boinc_mmap_file
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc        27 May  3 18:22 wrapper_checkpoint.txt
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc      4904 May  3 18:23 pilotlog.txt
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc   1456389 May  3 18:23 log.49645815._024328.job.log.1
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc       357 May  3 18:23 output.list
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc       410 May  3 18:23 runtime_log
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc   1843200 May  3 18:23 result.tar.gz
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc      8828 May  3 18:23 runtime_log.err
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc       665 May  3 18:23 fa6d2ecf751a.diag
[2026-05-03 18:23:09] -rw-r--r--. 1 boinc boinc     20810 May  3 18:23 stderr.txt
[2026-05-03 18:23:09] HITS file was successfully produced:
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc 197708867 May  3 18:21 shared/HITS.pool.root.1
[2026-05-03 18:23:09]  *** Contents of shared directory: ***
[2026-05-03 18:23:09] total 416956
[2026-05-03 18:23:09] -rw-r--r--. 2 boinc boinc 226684437 May  3 14:01 ATLAS.root_0
[2026-05-03 18:23:09] -rw-r--r--. 2 boinc boinc     15667 May  3 14:01 start_atlas.sh
[2026-05-03 18:23:09] -rw-r--r--. 2 boinc boinc    697444 May  3 14:01 input.tar.gz
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc 197708867 May  3 18:21 HITS.pool.root.1
[2026-05-03 18:23:09] -rw-------. 1 boinc boinc   1843200 May  3 18:23 result.tar.gz
18:23:11 (1871934): run_atlas exited; CPU time 58453.782815
18:23:11 (1871934): called boinc_finish(0)

</stderr_txt>
]]>

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