Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:21 (12626): wrapper (7.7.26015): starting
03:44:21 (12626): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 03:44:21] Arguments: --nthreads 8
[2026-05-02 03:44:21] Threads: 8
[2026-05-02 03:44:21] Checking for CVMFS
[2026-05-02 03:44:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 03:44:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 03:44:21] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 03:44:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 03:44:21] 2.11.2.0 24747 23575 101768 159114 1 116 17614987 25165824 353 130560 0 10645405 99.854 6540307 6968 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 03:44:21] CVMFS is ok
[2026-05-02 03:44:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 03:44:21] Checking for apptainer binary...
[2026-05-02 03:44:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 03:44:21] Running /usr/bin/apptainer --version
[2026-05-02 03:44:21] apptainer version 1.3.2-1.el7
[2026-05-02 03:44:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 03:44:23] cg-vwn480.simple-grid.lan
[2026-05-02 03:44:23] apptainer works
[2026-05-02 03:44:23] Set ATHENA_PROC_NUMBER=8
[2026-05-02 03:44:23] Set ATHENA_CORE_NUMBER=8
[2026-05-02 03:44:23] Starting ATLAS job with PandaID=7121185264
[2026-05-02 03:44:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 06:21:17]  *** The last 200 lines of the pilot log: ***
[2026-05-02 06:21:17] 2026-05-02 04:20:01,535 | INFO     | this job has now completed (state=finished)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,535 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,535 | INFO     | log transfer has been attempted: DONE
[2026-05-02 06:21:17] 2026-05-02 04:20:01,536 | INFO     | job 7121185264 has finished - writing final server update
[2026-05-02 06:21:17] 2026-05-02 04:20:01,536 | INFO     | total number of processed events: 400 (read)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,538 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7121185264/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,539 | INFO     | extracted standard info from prmon json
[2026-05-02 06:21:17] 2026-05-02 04:20:01,539 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 06:21:17] 2026-05-02 04:20:01,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 06:21:17] 2026-05-02 04:20:01,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 06:21:17] 2026-05-02 04:20:01,542 | INFO     | fitting pss+swap vs Time
[2026-05-02 06:21:17] 2026-05-02 04:20:01,543 | INFO     | sum of square deviations: 1088905998.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,544 | INFO     | sum of deviations: -1358559822.499998
[2026-05-02 06:21:17] 2026-05-02 04:20:01,544 | INFO     | mean x (centered): 0.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,544 | INFO     | mean y: 2484976.1513157897
[2026-05-02 06:21:17] 2026-05-02 04:20:01,544 | INFO     | intersect: 2484976.1513157897
[2026-05-02 06:21:17] 2026-05-02 04:20:01,545 | INFO     | chi2: 2.4580710033889117
[2026-05-02 06:21:17] 2026-05-02 04:20:01,545 | INFO     | sum of square deviations: 984941258.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,546 | INFO     | sum of deviations: 8656022549.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,546 | INFO     | mean x (centered): 0.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,546 | INFO     | mean y: 2499271.741496599
[2026-05-02 06:21:17] 2026-05-02 04:20:01,547 | INFO     | intersect: 2499271.741496599
[2026-05-02 06:21:17] 2026-05-02 04:20:01,547 | INFO     | chi2: 1.688113336730817
[2026-05-02 06:21:17] 2026-05-02 04:20:01,547 | INFO     | current chi2=1.688113336730817 (change=31.32365442644105 %)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,547 | INFO     | sum of square deviations: 887813855.5
[2026-05-02 06:21:17] 2026-05-02 04:20:01,548 | INFO     | sum of deviations: 8379412406.500001
[2026-05-02 06:21:17] 2026-05-02 04:20:01,548 | INFO     | mean x (centered): 0.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,548 | INFO     | mean y: 2498837.3591549294
[2026-05-02 06:21:17] 2026-05-02 04:20:01,549 | INFO     | intersect: 2498837.3591549294
[2026-05-02 06:21:17] 2026-05-02 04:20:01,549 | INFO     | chi2: 1.689903004361072
[2026-05-02 06:21:17] 2026-05-02 04:20:01,549 | INFO     | current chi2=1.689903004361072 (change=-0.10601584569676895 %)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,549 | INFO     | right removable region: 141
[2026-05-02 06:21:17] 2026-05-02 04:20:01,549 | INFO     | sum of square deviations: 984941258.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,550 | INFO     | sum of deviations: -24599733642.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,551 | INFO     | mean x (centered): 0.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,551 | INFO     | mean y: 2518536.6666666665
[2026-05-02 06:21:17] 2026-05-02 04:20:01,551 | INFO     | intersect: 2518536.6666666665
[2026-05-02 06:21:17] 2026-05-02 04:20:01,551 | INFO     | chi2: 0.9264584032766909
[2026-05-02 06:21:17] 2026-05-02 04:20:01,551 | INFO     | current chi2=0.9264584032766909 (change=62.30953450899529 %)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,551 | INFO     | sum of square deviations: 887813855.5
[2026-05-02 06:21:17] 2026-05-02 04:20:01,552 | INFO     | sum of deviations: -22892970935.5
[2026-05-02 06:21:17] 2026-05-02 04:20:01,553 | INFO     | mean x (centered): 0.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,553 | INFO     | mean y: 2515767.443661972
[2026-05-02 06:21:17] 2026-05-02 04:20:01,553 | INFO     | intersect: 2515767.443661972
[2026-05-02 06:21:17] 2026-05-02 04:20:01,553 | INFO     | chi2: 0.9115817993385136
[2026-05-02 06:21:17] 2026-05-02 04:20:01,553 | INFO     | current chi2=0.9115817993385136 (change=1.6057497978929112 %)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,553 | INFO     | left removable region: 10
[2026-05-02 06:21:17] 2026-05-02 04:20:01,557 | INFO     | sum of square deviations: 697054930.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,558 | INFO     | sum of deviations: -12329390577.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,558 | INFO     | mean x (centered): 0.0
[2026-05-02 06:21:17] 2026-05-02 04:20:01,558 | INFO     | mean y: 2533186.5496183205
[2026-05-02 06:21:17] 2026-05-02 04:20:01,558 | INFO     | intersect: 2533186.5496183205
[2026-05-02 06:21:17] 2026-05-02 04:20:01,558 | INFO     | chi2: 0.1043297492739672
[2026-05-02 06:21:17] 2026-05-02 04:20:01,558 | INFO     | current memory leak: -17.69 B/s (using 131 data points, chi2=0.10)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,559 | INFO     | could have reported an average CPU frequency of 2249 MHz (9 samples)
[2026-05-02 06:21:17] 2026-05-02 04:20:01,559 | INFO     | ..............................
[2026-05-02 06:21:17] 2026-05-02 04:20:01,559 | INFO     | . Timing measurements:
[2026-05-02 06:21:17] 2026-05-02 04:20:01,559 | INFO     | . get job = 0 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | . initial setup = 7 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | . payload setup = 17 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | . stage-in = 0 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | . payload execution = 9271 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | . stage-out = 3 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | . log creation = 1 s
[2026-05-02 06:21:17] 2026-05-02 04:20:01,560 | INFO     | ..............................
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | 
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | job summary report
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | --------------------------------------------------
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | PanDA job id: 7121185264
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | task id: 49263200
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | errors: (none)
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 06:21:17] 2026-05-02 04:20:02,144 | INFO     | pilot state: finished 
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | transexitcode: 0
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | exeerrorcode: 0
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | exeerrordiag: 
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | exitcode: 0
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | exitmsg: OK
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | cpuconsumptiontime: 51751 s
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | nevents: 400
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | neventsw: 0
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | pid: 21477
[2026-05-02 06:21:17] 2026-05-02 04:20:02,145 | INFO     | pgrp: 21477
[2026-05-02 06:21:17] 2026-05-02 04:20:02,146 | INFO     | corecount: 8
[2026-05-02 06:21:17] 2026-05-02 04:20:02,146 | INFO     | event service: False
[2026-05-02 06:21:17] 2026-05-02 04:20:02,146 | INFO     | sizes: {0: 2275583, 1: 2277185, 11: 2277185, 9293: 2305620, 9294: 2305619, 9299: 2314859, 9300: 2315061}
[2026-05-02 06:21:17] 2026-05-02 04:20:02,146 | INFO     | --------------------------------------------------
[2026-05-02 06:21:17] 2026-05-02 04:20:02,146 | INFO     | 
[2026-05-02 06:21:17] 2026-05-02 04:20:02,146 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-05-02 06:21:17] 2026-05-02 04:20:02,671 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,671 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 06:21:17] 2026-05-02 04:20:02,673 | INFO     | job 7121185264 has completed (purged errors)
[2026-05-02 06:21:17] 2026-05-02 04:20:02,674 | INFO     | overall cleanup function is called
[2026-05-02 06:21:17] 2026-05-02 04:20:03,681 | INFO     | --- collectZombieJob: --- 10, [21477]
[2026-05-02 06:21:17] 2026-05-02 04:20:03,682 | INFO     | zombie collector waiting for pid 21477
[2026-05-02 06:21:17] 2026-05-02 04:20:03,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 06:21:17] 2026-05-02 04:20:03,682 | INFO     | collected zombie processes
[2026-05-02 06:21:17] 2026-05-02 04:20:03,682 | INFO     | will attempt to kill all subprocesses of pid=21477
[2026-05-02 06:21:17] 2026-05-02 04:20:03,741 | INFO     | process IDs to be killed: [21477] (in reverse order)
[2026-05-02 06:21:17] 2026-05-02 04:20:04,552 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 06:21:17] 2026-05-02 04:20:04,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 06:21:17] 2026-05-02 04:20:04,554 | INFO     | did not find any defunct processes belonging to 21477
[2026-05-02 06:21:17] 2026-05-02 04:20:04,556 | INFO     | did not find any defunct processes belonging to 21477
[2026-05-02 06:21:17] 2026-05-02 04:20:04,557 | INFO     | Ready for new job
[2026-05-02 06:21:17] 2026-05-02 04:20:04,558 | INFO     | ***************************************
[2026-05-02 06:21:17] 2026-05-02 04:20:04,558 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 06:21:17] 2026-05-02 04:20:04,558 | INFO     | ***************************************
[2026-05-02 06:21:17] 2026-05-02 04:20:04,559 | INFO     | 
[2026-05-02 06:21:17] 2026-05-02 04:20:04,559 | INFO     | pilot is running in a VM
[2026-05-02 06:21:17] 2026-05-02 04:20:04,559 | INFO     | architecture information:
[2026-05-02 06:21:17] 2026-05-02 04:20:04,564 | INFO     | executing command: cat /etc/os-release
[2026-05-02 06:21:17] 2026-05-02 04:20:04,869 | INFO     | cat /etc/os-release:
[2026-05-02 06:21:17] NAME="CentOS Linux"
[2026-05-02 06:21:17] VERSION="7 (Core)"
[2026-05-02 06:21:17] ID="centos"
[2026-05-02 06:21:17] ID_LIKE="rhel fedora"
[2026-05-02 06:21:17] VERSION_ID="7"
[2026-05-02 06:21:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 06:21:17] ANSI_COLOR="0;31"
[2026-05-02 06:21:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 06:21:17] HOME_URL="https://www.centos.org/"
[2026-05-02 06:21:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 06:21:17] 
[2026-05-02 06:21:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 06:21:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 06:21:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 06:21:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 06:21:17] 
[2026-05-02 06:21:17] 2026-05-02 04:20:04,869 | INFO     | ***************************************
[2026-05-02 06:21:17] 2026-05-02 04:20:05,373 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-05-02 06:21:17] 2026-05-02 04:20:05,575 | INFO     | sufficient remaining disk space (497484300288 B)
[2026-05-02 06:21:17] 2026-05-02 04:20:05,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 06:21:17] 2026-05-02 04:20:05,576 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 06:21:17] 2026-05-02 04:20:05,576 | INFO     | update_server=False
[2026-05-02 06:21:17] 2026-05-02 04:20:05,576 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 06:21:17] 2026-05-02 04:20:05,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 06:21:17] 2026-05-02 04:20:05,953 | INFO     | all data control threads have been joined
[2026-05-02 06:21:17] 2026-05-02 04:20:05,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:21:17] 2026-05-02 04:20:05,980 | INFO     | aborting loop
[2026-05-02 06:21:17] 2026-05-02 04:20:06,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 06:21:17] 2026-05-02 04:20:06,178 | INFO     | all job control threads have been joined
[2026-05-02 06:21:17] 2026-05-02 04:20:06,583 | INFO     | [job] retrieve thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:06,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:21:17] 2026-05-02 04:20:06,959 | INFO     | [data] control thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:06,966 | INFO     | all payload control threads have been joined
[2026-05-02 06:21:17] 2026-05-02 04:20:06,986 | INFO     | [job] job monitor thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,032 | INFO     | [data] copytool_in thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,105 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,185 | INFO     | [job] control thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,222 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,282 | INFO     | [payload] failed_post thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,349 | INFO     | [job] validate thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,384 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,413 | INFO     | [payload] validate_post thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,585 | INFO     | [data] copytool_out thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,612 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,769 | INFO     | [job] queue monitor thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:07,972 | INFO     | [payload] control thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:10,144 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 06:21:17] 2026-05-02 04:20:35,793 | INFO     | PID=16797 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 06:21:17] 2026-05-02 04:20:35,793 | INFO     | .. there are 2 such processes running
[2026-05-02 06:21:17] 2026-05-02 04:20:35,805 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 06:21:17] 2026-05-02 04:20:35,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 06:21:17] 2026-05-02 04:20:35,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 06:21:17] 2026-05-02 04:21:05,354 | INFO     | [monitor] cgroup control has ended
[2026-05-02 06:21:17] 2026-05-02 04:21:06,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646866696000)>', '<ExcThread(monitor, started 140646186727168)>']
[2026-05-02 06:21:17] 2026-05-02 04:21:06,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 06:21:17] 2026-05-02 04:21:06,989 | INFO     | [monitor] control thread has ended
[2026-05-02 06:21:17] 2026-05-02 04:21:11,854 | INFO     | all workflow threads have been joined
[2026-05-02 06:21:17] 2026-05-02 04:21:11,855 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 06:21:17] 2026-05-02 04:21:11,855 | INFO     | traces error code: 0
[2026-05-02 06:21:17] 2026-05-02 04:21:11,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 06:21:17] 2026-05-02 04:21:12,174 [wrapper] ==== pilot stdout END ====
[2026-05-02 06:21:17] 2026-05-02 04:21:12,273 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 06:21:17] 2026-05-02 04:21:12,365 [wrapper] pilotpid: 16797
[2026-05-02 06:21:17] 2026-05-02 04:21:12,471 [wrapper] Pilot exit status: 0
[2026-05-02 06:21:17] 2026-05-02 04:21:12,998 [wrapper] pandaids: 7121185264
[2026-05-02 06:21:17] 2026-05-02 04:21:14,173 [wrapper] cleanup supervisor_pilot 13356 16798
[2026-05-02 06:21:17] 2026-05-02 04:21:14,294 [wrapper] Test setup, not cleaning
[2026-05-02 06:21:17] 2026-05-02 04:21:14,407 [wrapper] apfmon messages muted
[2026-05-02 06:21:17] 2026-05-02 04:21:14,516 [wrapper] ==== wrapper stdout END ====
[2026-05-02 06:21:17] 2026-05-02 04:21:14,579 [wrapper] ==== wrapper stderr END ====
[2026-05-02 06:21:17]  *** Error codes and diagnostics ***
[2026-05-02 06:21:17]     "exeErrorCode": 0,
[2026-05-02 06:21:17]     "pilotErrorCode": 0,
[2026-05-02 06:21:17]  *** Listing of results directory ***
[2026-05-02 06:21:17] total 418108
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc    683926 May  1 21:08 pilot3.tar.gz
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc      5631 May  1 21:08 queuedata.json
[2026-05-02 06:21:17] -rwx------. 1 boinc boinc     36322 May  1 21:09 runpilot2-wrapper.sh
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc       100 May  2 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 06:21:17] -rwxr-xr-x. 1 boinc boinc      7986 May  2 03:44 run_atlas
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc       105 May  2 03:44 job.xml
[2026-05-02 06:21:17] -rw-r--r--. 2 boinc boinc 222790515 May  2 03:44 EVNT.49263198._001694.pool.root.1
[2026-05-02 06:21:17] -rw-r--r--. 2 boinc boinc    697425 May  2 03:44 input.tar.gz
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc      6308 May  2 03:44 init_data.xml
[2026-05-02 06:21:17] -rw-r--r--. 2 boinc boinc     15667 May  2 03:44 start_atlas.sh
[2026-05-02 06:21:17] drwxrwx--x. 2 boinc boinc        68 May  2 03:44 shared
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc         0 May  2 03:44 boinc_lockfile
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc      2574 May  2 03:44 pandaJob.out
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc   1002984 May  2 03:44 agis_schedconf.cvmfs.json
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc   1508687 May  2 03:44 agis_ddmendpoints.agis.ALL.json
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc       415 May  2 03:44 workernode_map.json
[2026-05-02 06:21:17] drwx------. 5 boinc boinc      4096 May  2 03:44 pilot3
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc 198782788 May  2 06:18 HITS.49263200._083605.pool.root.1
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc       487 May  2 06:19 boinc_task_state.xml
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc      1019 May  2 06:19 memory_monitor_summary.json
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc    337937 May  2 06:19 log.49263200._083605.job.log.tgz.1
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc      6338 May  2 06:20 heartbeat_new.json
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc      6229 May  2 06:20 heartbeat.json
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc        95 May  2 06:20 pilot_heartbeat.json
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc      8192 May  2 06:20 boinc_mmap_file
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc        27 May  2 06:20 wrapper_checkpoint.txt
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc      4884 May  2 06:21 pilotlog.txt
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc    887618 May  2 06:21 log.49263200._083605.job.log.1
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc       357 May  2 06:21 output.list
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc       410 May  2 06:21 runtime_log
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc   1239040 May  2 06:21 result.tar.gz
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc      8454 May  2 06:21 runtime_log.err
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc       652 May  2 06:21 fa6067e00d8f.diag
[2026-05-02 06:21:17] -rw-r--r--. 1 boinc boinc     20616 May  2 06:21 stderr.txt
[2026-05-02 06:21:17] HITS file was successfully produced:
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc 198782788 May  2 06:18 shared/HITS.pool.root.1
[2026-05-02 06:21:17]  *** Contents of shared directory: ***
[2026-05-02 06:21:17] total 413608
[2026-05-02 06:21:17] -rw-r--r--. 2 boinc boinc 222790515 May  2 03:44 ATLAS.root_0
[2026-05-02 06:21:17] -rw-r--r--. 2 boinc boinc    697425 May  2 03:44 input.tar.gz
[2026-05-02 06:21:17] -rw-r--r--. 2 boinc boinc     15667 May  2 03:44 start_atlas.sh
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc 198782788 May  2 06:18 HITS.pool.root.1
[2026-05-02 06:21:17] -rw-------. 1 boinc boinc   1239040 May  2 06:21 result.tar.gz
06:21:18 (12626): run_atlas exited; CPU time 51811.329791
06:21:18 (12626): called boinc_finish(0)

</stderr_txt>
]]>

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