Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:33:59 (24394): wrapper (7.7.26015): starting
05:33:59 (24394): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 05:33:59] Arguments: --nthreads 8
[2026-05-02 05:33:59] Threads: 8
[2026-05-02 05:33:59] Checking for CVMFS
[2026-05-02 05:34:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 05:34:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 05:34:00] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 05:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 05:34:00] 2.11.2.0 10374 23670 99732 159118 2 201 18219699 25165825 485 130560 0 10433895 99.943 3618080 5264 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 05:34:00] CVMFS is ok
[2026-05-02 05:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 05:34:00] Checking for apptainer binary...
[2026-05-02 05:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 05:34:00] Running /usr/bin/apptainer --version
[2026-05-02 05:34:00] apptainer version 1.3.2-1.el7
[2026-05-02 05:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 05:34:02] cg-vwn364.simple-grid.lan
[2026-05-02 05:34:02] apptainer works
[2026-05-02 05:34:02] Set ATHENA_PROC_NUMBER=8
[2026-05-02 05:34:02] Set ATHENA_CORE_NUMBER=8
[2026-05-02 05:34:02] Starting ATLAS job with PandaID=7120954177
[2026-05-02 05:34:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 08:08:01]  *** The last 200 lines of the pilot log: ***
[2026-05-02 08:08:01] 2026-05-02 06:07:11,943 | INFO     | this job has now completed (state=finished)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,943 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,943 | INFO     | log transfer has been attempted: DONE
[2026-05-02 08:08:01] 2026-05-02 06:07:11,944 | INFO     | job 7120954177 has finished - writing final server update
[2026-05-02 08:08:01] 2026-05-02 06:07:11,944 | INFO     | total number of processed events: 400 (read)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,946 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7120954177/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,947 | INFO     | extracted standard info from prmon json
[2026-05-02 08:08:01] 2026-05-02 06:07:11,947 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 08:08:01] 2026-05-02 06:07:11,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 08:08:01] 2026-05-02 06:07:11,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 08:08:01] 2026-05-02 06:07:11,951 | INFO     | fitting pss+swap vs Time
[2026-05-02 08:08:01] 2026-05-02 06:07:11,951 | INFO     | sum of square deviations: 1046484737.5
[2026-05-02 08:08:01] 2026-05-02 06:07:11,952 | INFO     | sum of deviations: 334087301.0000019
[2026-05-02 08:08:01] 2026-05-02 06:07:11,952 | INFO     | mean x (centered): 0.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,952 | INFO     | mean y: 2484639.92
[2026-05-02 08:08:01] 2026-05-02 06:07:11,953 | INFO     | intersect: 2484639.92
[2026-05-02 08:08:01] 2026-05-02 06:07:11,953 | INFO     | chi2: 2.545751380069727
[2026-05-02 08:08:01] 2026-05-02 06:07:11,953 | INFO     | sum of square deviations: 945282840.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,954 | INFO     | sum of deviations: 10019783627.999994
[2026-05-02 08:08:01] 2026-05-02 06:07:11,954 | INFO     | mean x (centered): 0.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,954 | INFO     | mean y: 2498830.724137931
[2026-05-02 08:08:01] 2026-05-02 06:07:11,955 | INFO     | intersect: 2498830.724137931
[2026-05-02 08:08:01] 2026-05-02 06:07:11,955 | INFO     | chi2: 1.784732692206068
[2026-05-02 08:08:01] 2026-05-02 06:07:11,955 | INFO     | current chi2=1.784732692206068 (change=29.893676728275604 %)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,955 | INFO     | sum of square deviations: 850825255.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,956 | INFO     | sum of deviations: 9659591864.999996
[2026-05-02 08:08:01] 2026-05-02 06:07:11,957 | INFO     | mean x (centered): 0.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,957 | INFO     | mean y: 2498250.785714286
[2026-05-02 08:08:01] 2026-05-02 06:07:11,957 | INFO     | intersect: 2498250.785714286
[2026-05-02 08:08:01] 2026-05-02 06:07:11,957 | INFO     | chi2: 1.786667357205321
[2026-05-02 08:08:01] 2026-05-02 06:07:11,957 | INFO     | current chi2=1.786667357205321 (change=-0.10840082706512781 %)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,957 | INFO     | right removable region: 139
[2026-05-02 08:08:01] 2026-05-02 06:07:11,958 | INFO     | sum of square deviations: 945282840.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,959 | INFO     | sum of deviations: -23802158764.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,959 | INFO     | mean x (centered): 0.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,959 | INFO     | mean y: 2520501.772413793
[2026-05-02 08:08:01] 2026-05-02 06:07:11,959 | INFO     | intersect: 2520501.772413793
[2026-05-02 08:08:01] 2026-05-02 06:07:11,959 | INFO     | chi2: 0.969569322328783
[2026-05-02 08:08:01] 2026-05-02 06:07:11,960 | INFO     | current chi2=0.969569322328783 (change=61.9142179429074 %)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,960 | INFO     | sum of square deviations: 850825255.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,961 | INFO     | sum of deviations: -26081529172.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,961 | INFO     | mean x (centered): 0.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,961 | INFO     | mean y: 2524182.0857142857
[2026-05-02 08:08:01] 2026-05-02 06:07:11,961 | INFO     | intersect: 2524182.0857142857
[2026-05-02 08:08:01] 2026-05-02 06:07:11,961 | INFO     | chi2: 0.9407590246681634
[2026-05-02 08:08:01] 2026-05-02 06:07:11,962 | INFO     | current chi2=0.9407590246681634 (change=2.9714530974867177 %)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,962 | INFO     | left removable region: 10
[2026-05-02 08:08:01] 2026-05-02 06:07:11,962 | INFO     | sum of square deviations: 665612480.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,963 | INFO     | sum of deviations: -15532739636.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,963 | INFO     | mean x (centered): 0.0
[2026-05-02 08:08:01] 2026-05-02 06:07:11,963 | INFO     | mean y: 2542108.472868217
[2026-05-02 08:08:01] 2026-05-02 06:07:11,963 | INFO     | intersect: 2542108.472868217
[2026-05-02 08:08:01] 2026-05-02 06:07:11,963 | INFO     | chi2: 0.14047620371288877
[2026-05-02 08:08:01] 2026-05-02 06:07:11,964 | INFO     | current memory leak: -23.34 B/s (using 129 data points, chi2=0.14)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,964 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-02 08:08:01] 2026-05-02 06:07:11,964 | INFO     | ..............................
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . Timing measurements:
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . get job = 0 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . initial setup = 13 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . payload setup = 26 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . stage-in = 0 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . payload execution = 9113 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . stage-out = 1 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | . log creation = 0 s
[2026-05-02 08:08:01] 2026-05-02 06:07:11,965 | INFO     | ..............................
[2026-05-02 08:08:01] 2026-05-02 06:07:12,097 | INFO     | 
[2026-05-02 08:08:01] 2026-05-02 06:07:12,097 | INFO     | job summary report
[2026-05-02 08:08:01] 2026-05-02 06:07:12,097 | INFO     | --------------------------------------------------
[2026-05-02 08:08:01] 2026-05-02 06:07:12,097 | INFO     | PanDA job id: 7120954177
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | task id: 49718416
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | errors: (none)
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | pilot state: finished 
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | transexitcode: 0
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | exeerrorcode: 0
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | exeerrordiag: 
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | exitcode: 0
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | exitmsg: OK
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | cpuconsumptiontime: 54258 s
[2026-05-02 08:08:01] 2026-05-02 06:07:12,098 | INFO     | nevents: 400
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | neventsw: 0
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | pid: 2364
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | pgrp: 2364
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | corecount: 8
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | event service: False
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | sizes: {0: 2274670, 1: 2275356, 2: 2277185, 9144: 2305529, 9145: 2314529, 9148: 2314971}
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | --------------------------------------------------
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | 
[2026-05-02 08:08:01] 2026-05-02 06:07:12,099 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-05-02 08:08:01] 2026-05-02 06:07:12,124 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,124 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,124 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,126 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 08:08:01] 2026-05-02 06:07:12,127 | INFO     | job 7120954177 has completed (purged errors)
[2026-05-02 08:08:01] 2026-05-02 06:07:12,127 | INFO     | overall cleanup function is called
[2026-05-02 08:08:01] 2026-05-02 06:07:13,135 | INFO     | --- collectZombieJob: --- 10, [2364]
[2026-05-02 08:08:01] 2026-05-02 06:07:13,135 | INFO     | zombie collector waiting for pid 2364
[2026-05-02 08:08:01] 2026-05-02 06:07:13,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 08:08:01] 2026-05-02 06:07:13,135 | INFO     | collected zombie processes
[2026-05-02 08:08:01] 2026-05-02 06:07:13,136 | INFO     | will attempt to kill all subprocesses of pid=2364
[2026-05-02 08:08:01] 2026-05-02 06:07:13,193 | INFO     | process IDs to be killed: [2364] (in reverse order)
[2026-05-02 08:08:01] 2026-05-02 06:07:13,253 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 08:08:01] 2026-05-02 06:07:13,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 08:08:01] 2026-05-02 06:07:13,256 | INFO     | did not find any defunct processes belonging to 2364
[2026-05-02 08:08:01] 2026-05-02 06:07:13,258 | INFO     | did not find any defunct processes belonging to 2364
[2026-05-02 08:08:01] 2026-05-02 06:07:13,258 | INFO     | Ready for new job
[2026-05-02 08:08:01] 2026-05-02 06:07:13,260 | INFO     | ***************************************
[2026-05-02 08:08:01] 2026-05-02 06:07:13,260 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 08:08:01] 2026-05-02 06:07:13,260 | INFO     | ***************************************
[2026-05-02 08:08:01] 2026-05-02 06:07:13,260 | INFO     | 
[2026-05-02 08:08:01] 2026-05-02 06:07:13,261 | INFO     | pilot is running in a VM
[2026-05-02 08:08:01] 2026-05-02 06:07:13,261 | INFO     | architecture information:
[2026-05-02 08:08:01] 2026-05-02 06:07:13,262 | INFO     | executing command: cat /etc/os-release
[2026-05-02 08:08:01] 2026-05-02 06:07:13,278 | INFO     | cat /etc/os-release:
[2026-05-02 08:08:01] NAME="CentOS Linux"
[2026-05-02 08:08:01] VERSION="7 (Core)"
[2026-05-02 08:08:01] ID="centos"
[2026-05-02 08:08:01] ID_LIKE="rhel fedora"
[2026-05-02 08:08:01] VERSION_ID="7"
[2026-05-02 08:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 08:08:01] ANSI_COLOR="0;31"
[2026-05-02 08:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 08:08:01] HOME_URL="https://www.centos.org/"
[2026-05-02 08:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 08:08:01] 
[2026-05-02 08:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 08:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 08:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 08:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 08:08:01] 
[2026-05-02 08:08:01] 2026-05-02 06:07:13,279 | INFO     | ***************************************
[2026-05-02 08:08:01] 2026-05-02 06:07:13,782 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-05-02 08:08:01] 2026-05-02 06:07:13,800 | INFO     | sufficient remaining disk space (497016635392 B)
[2026-05-02 08:08:01] 2026-05-02 06:07:13,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 08:08:01] 2026-05-02 06:07:13,801 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 08:08:01] 2026-05-02 06:07:13,801 | INFO     | update_server=False
[2026-05-02 08:08:01] 2026-05-02 06:07:13,801 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 08:08:01] 2026-05-02 06:07:13,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 08:08:01] 2026-05-02 06:07:13,802 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-02 08:08:01] 2026-05-02 06:07:13,802 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 08:08:01] 2026-05-02 06:07:13,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 08:08:01] 2026-05-02 06:07:13,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 08:08:01] 2026-05-02 06:07:13,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:08:01] 2026-05-02 06:07:13,938 | INFO     | all data control threads have been joined
[2026-05-02 08:08:01] 2026-05-02 06:07:13,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:08:01] 2026-05-02 06:07:13,947 | INFO     | aborting loop
[2026-05-02 08:08:01] 2026-05-02 06:07:14,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 08:08:01] 2026-05-02 06:07:14,806 | INFO     | [job] retrieve thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:14,808 | INFO     | [job] queue monitor thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:14,824 | INFO     | [payload] validate_post thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:14,944 | INFO     | [data] control thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:14,952 | INFO     | [job] job monitor thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:15,154 | INFO     | all payload control threads have been joined
[2026-05-02 08:08:01] 2026-05-02 06:07:15,240 | INFO     | [job] validate thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:15,322 | INFO     | [payload] failed_post thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:15,363 | INFO     | [data] copytool_in thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:15,409 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:15,451 | INFO     | all job control threads have been joined
[2026-05-02 08:08:01] 2026-05-02 06:07:15,824 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:16,094 | INFO     | [data] copytool_out thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:16,160 | INFO     | [payload] control thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:16,227 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:16,454 | INFO     | [job] control thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:17,808 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:23,949 | INFO     | job.realtimelogging is not enabled
[2026-05-02 08:08:01] 2026-05-02 06:07:24,955 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 08:08:01] 2026-05-02 06:07:55,912 | INFO     | [monitor] cgroup control has ended
[2026-05-02 08:08:01] 2026-05-02 06:07:56,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247851427648)>', '<ExcThread(monitor, started 140247560075008)>']
[2026-05-02 08:08:01] 2026-05-02 06:07:57,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 08:08:01] 2026-05-02 06:07:57,022 | INFO     | [monitor] control thread has ended
[2026-05-02 08:08:01] 2026-05-02 06:08:01,560 | INFO     | all workflow threads have been joined
[2026-05-02 08:08:01] 2026-05-02 06:08:01,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 08:08:01] 2026-05-02 06:08:01,561 | INFO     | traces error code: 0
[2026-05-02 08:08:01] 2026-05-02 06:08:01,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 08:08:01] 2026-05-02 06:08:01,702 [wrapper] ==== pilot stdout END ====
[2026-05-02 08:08:01] 2026-05-02 06:08:01,705 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 08:08:01] 2026-05-02 06:08:01,710 [wrapper] pilotpid: 29151
[2026-05-02 08:08:01] 2026-05-02 06:08:01,714 [wrapper] Pilot exit status: 0
[2026-05-02 08:08:01] 2026-05-02 06:08:01,728 [wrapper] pandaids: 7120954177
[2026-05-02 08:08:01] 2026-05-02 06:08:01,765 [wrapper] cleanup supervisor_pilot 14499 29152
[2026-05-02 08:08:01] 2026-05-02 06:08:01,769 [wrapper] Test setup, not cleaning
[2026-05-02 08:08:01] 2026-05-02 06:08:01,782 [wrapper] apfmon messages muted
[2026-05-02 08:08:01] 2026-05-02 06:08:01,786 [wrapper] ==== wrapper stdout END ====
[2026-05-02 08:08:01] 2026-05-02 06:08:01,789 [wrapper] ==== wrapper stderr END ====
[2026-05-02 08:08:01]  *** Error codes and diagnostics ***
[2026-05-02 08:08:01]     "exeErrorCode": 0,
[2026-05-02 08:08:01]     "pilotErrorCode": 0,
[2026-05-02 08:08:01]  *** Listing of results directory ***
[2026-05-02 08:08:01] total 621440
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc    683926 May  1 18:12 pilot3.tar.gz
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc      5631 May  1 18:16 queuedata.json
[2026-05-02 08:08:01] -rwx------. 1 boinc boinc     36322 May  1 18:17 runpilot2-wrapper.sh
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc       100 May  2 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 08:08:01] -rwxr-xr-x. 1 boinc boinc      7986 May  2 05:33 run_atlas
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc       105 May  2 05:33 job.xml
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc      6308 May  2 05:33 init_data.xml
[2026-05-02 08:08:01] -rw-r--r--. 2 boinc boinc 439585058 May  2 05:33 EVNT.46373187._000205.pool.root.1
[2026-05-02 08:08:01] -rw-r--r--. 2 boinc boinc     15667 May  2 05:33 start_atlas.sh
[2026-05-02 08:08:01] drwxrwx--x. 2 boinc boinc        68 May  2 05:33 shared
[2026-05-02 08:08:01] -rw-r--r--. 2 boinc boinc    697429 May  2 05:33 input.tar.gz
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc         0 May  2 05:33 boinc_lockfile
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc      2596 May  2 05:34 pandaJob.out
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc   1002976 May  2 05:34 agis_schedconf.cvmfs.json
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc   1508687 May  2 05:34 agis_ddmendpoints.agis.ALL.json
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc       415 May  2 05:34 workernode_map.json
[2026-05-02 08:08:01] drwx------. 5 boinc boinc      4096 May  2 05:34 pilot3
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc       488 May  2 08:06 boinc_task_state.xml
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc 190227624 May  2 08:06 HITS.49718416._021366.pool.root.1
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc        95 May  2 08:06 pilot_heartbeat.json
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc      1011 May  2 08:07 memory_monitor_summary.json
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc    334416 May  2 08:07 log.49718416._021366.job.log.tgz.1
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc      6330 May  2 08:07 heartbeat_new.json
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc      6221 May  2 08:07 heartbeat.json
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc      8192 May  2 08:07 boinc_mmap_file
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc        27 May  2 08:07 wrapper_checkpoint.txt
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc      4687 May  2 08:08 pilotlog.txt
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc    873466 May  2 08:08 log.49718416._021366.job.log.1
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc       357 May  2 08:08 output.list
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc       410 May  2 08:08 runtime_log
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc   1228800 May  2 08:08 result.tar.gz
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc      8454 May  2 08:08 runtime_log.err
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc       652 May  2 08:08 d200be7cfa1f.diag
[2026-05-02 08:08:01] -rw-r--r--. 1 boinc boinc     20494 May  2 08:08 stderr.txt
[2026-05-02 08:08:01] HITS file was successfully produced:
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc 190227624 May  2 08:06 shared/HITS.pool.root.1
[2026-05-02 08:08:01]  *** Contents of shared directory: ***
[2026-05-02 08:08:01] total 616956
[2026-05-02 08:08:01] -rw-r--r--. 2 boinc boinc 439585058 May  2 05:33 ATLAS.root_0
[2026-05-02 08:08:01] -rw-r--r--. 2 boinc boinc     15667 May  2 05:33 start_atlas.sh
[2026-05-02 08:08:01] -rw-r--r--. 2 boinc boinc    697429 May  2 05:33 input.tar.gz
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc 190227624 May  2 08:06 HITS.pool.root.1
[2026-05-02 08:08:01] -rw-------. 1 boinc boinc   1228800 May  2 08:08 result.tar.gz
08:08:03 (24394): run_atlas exited; CPU time 54327.562985
08:08:03 (24394): called boinc_finish(0)

</stderr_txt>
]]>

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