Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:16:06 (3211538): wrapper (7.7.26015): starting
03:16:06 (3211538): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 03:16:06] Arguments: --nthreads 4
[2026-05-05 03:16:06] Threads: 4
[2026-05-05 03:16:06] Checking for CVMFS
[2026-05-05 03:16:06] No cvmfs_config command found, will try listing directly
[2026-05-05 03:16:06] CVMFS is ok
[2026-05-05 03:16:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 03:16:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 03:16:06] Further information can be found at the LHC@home message board.
[2026-05-05 03:16:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 03:16:06] Checking for apptainer binary...
[2026-05-05 03:16:06] which: no apptainer in ((null))
[2026-05-05 03:16:06] apptainer is not installed, using version from CVMFS
[2026-05-05 03:16:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 03:16:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-05-05 03:16:07] apptainer works
[2026-05-05 03:16:07] Set ATHENA_PROC_NUMBER=4
[2026-05-05 03:16:07] Set ATHENA_CORE_NUMBER=4
[2026-05-05 03:16:07] Starting ATLAS job with PandaID=7120686611
[2026-05-05 03:16:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 06:20:32]  *** The last 200 lines of the pilot log: ***
[2026-05-05 06:20:32] 2026-05-05 04:19:37,936 | INFO     | monitor loop #731: job 0:7120686611 is in state 'finished'
[2026-05-05 06:20:32] 2026-05-05 04:19:37,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,350 | INFO     | job 7120686611 has state=finished
[2026-05-05 06:20:32] 2026-05-05 04:19:38,350 | INFO     | preparing for final server update for job 7120686611 in state='finished'
[2026-05-05 06:20:32] 2026-05-05 04:19:38,351 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/1/PanDA_Pilot-7120686611/jobReport.json
[2026-05-05 06:20:32] 2026-05-05 04:19:38,354 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/1/workernode_map.json
[2026-05-05 06:20:32] 2026-05-05 04:19:38,354 | INFO     | this job has now completed (state=finished)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,354 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,354 | INFO     | log transfer has been attempted: DONE
[2026-05-05 06:20:32] 2026-05-05 04:19:38,354 | INFO     | job 7120686611 has finished - writing final server update
[2026-05-05 06:20:32] 2026-05-05 04:19:38,355 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4132346/.job.ad'
[2026-05-05 06:20:32] 2026-05-05 04:19:38,355 | INFO     | total number of processed events: 400 (read)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,384 | INFO     | using path: /var/lib/boinc/var/slot60/slots/1/PanDA_Pilot-7120686611/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,385 | INFO     | extracted standard info from prmon json
[2026-05-05 06:20:32] 2026-05-05 04:19:38,385 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 06:20:32] 2026-05-05 04:19:38,385 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 06:20:32] 2026-05-05 04:19:38,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 06:20:32] 2026-05-05 04:19:38,389 | INFO     | fitting pss+swap vs Time
[2026-05-05 06:20:32] 2026-05-05 04:19:38,389 | INFO     | sum of square deviations: 1778377530.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,390 | INFO     | sum of deviations: 10242579478.999998
[2026-05-05 06:20:32] 2026-05-05 04:19:38,391 | INFO     | mean x (centered): 0.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,391 | INFO     | mean y: 2333149.156424581
[2026-05-05 06:20:32] 2026-05-05 04:19:38,391 | INFO     | intersect: 2333149.156424581
[2026-05-05 06:20:32] 2026-05-05 04:19:38,391 | INFO     | chi2: 1.2724909067592383
[2026-05-05 06:20:32] 2026-05-05 04:19:38,391 | INFO     | sum of square deviations: 1633472487.5
[2026-05-05 06:20:32] 2026-05-05 04:19:38,392 | INFO     | sum of deviations: 10029655990.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,392 | INFO     | mean x (centered): 0.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,393 | INFO     | mean y: 2332925.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,393 | INFO     | intersect: 2332925.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,393 | INFO     | chi2: 1.2733795611350773
[2026-05-05 06:20:32] 2026-05-05 04:19:38,393 | INFO     | current chi2=1.2733795611350773 (change=-0.06983581345208062 %)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,393 | INFO     | right removable region: 173
[2026-05-05 06:20:32] 2026-05-05 04:19:38,393 | INFO     | sum of square deviations: 1633472487.5
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | sum of deviations: -10392998280.999996
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | mean x (centered): 0.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | mean y: 2354513.7126436783
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | intersect: 2354513.7126436783
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | chi2: 0.016195902945040325
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | current chi2=0.016195902945040325 (change=98.72722839440262 %)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,395 | INFO     | sum of square deviations: 1496660620.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,396 | INFO     | sum of deviations: -10106751267.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,397 | INFO     | mean x (centered): 0.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,397 | INFO     | mean y: 2354178.5857988168
[2026-05-05 06:20:32] 2026-05-05 04:19:38,397 | INFO     | intersect: 2354178.5857988168
[2026-05-05 06:20:32] 2026-05-05 04:19:38,397 | INFO     | chi2: 0.014115991813692705
[2026-05-05 06:20:32] 2026-05-05 04:19:38,397 | INFO     | current chi2=0.014115991813692705 (change=12.842205454093266 %)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,397 | INFO     | left removable region: 10
[2026-05-05 06:20:32] 2026-05-05 04:19:38,398 | INFO     | sum of square deviations: 1342841922.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,398 | INFO     | sum of deviations: -9691608630.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,399 | INFO     | mean x (centered): 0.0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,399 | INFO     | mean y: 2354672.8957055216
[2026-05-05 06:20:32] 2026-05-05 04:19:38,399 | INFO     | intersect: 2354672.8957055216
[2026-05-05 06:20:32] 2026-05-05 04:19:38,399 | INFO     | chi2: 0.013612267258169627
[2026-05-05 06:20:32] 2026-05-05 04:19:38,399 | INFO     | current memory leak: -7.22 B/s (using 163 data points, chi2=0.01)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | could have reported an average CPU frequency of 2683 MHz (10 samples)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | ..............................
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . Timing measurements:
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . get job = 0 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . initial setup = 19 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . payload setup = 28 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . stage-in = 0 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . payload execution = 10911 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . stage-out = 1 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | . log creation = 0 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,400 | INFO     | ..............................
[2026-05-05 06:20:32] 2026-05-05 04:19:38,717 | INFO     | 
[2026-05-05 06:20:32] 2026-05-05 04:19:38,717 | INFO     | job summary report
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | --------------------------------------------------
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | PanDA job id: 7120686611
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | task id: 49263200
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | errors: (none)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | pilot state: finished 
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | transexitcode: 0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | exeerrorcode: 0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | exeerrordiag: 
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | exitcode: 0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,718 | INFO     | exitmsg: OK
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | cpuconsumptiontime: 39707 s
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | nevents: 400
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | neventsw: 0
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | pid: 3221940
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | pgrp: 3221940
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | corecount: 4
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | event service: False
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | sizes: {0: 2270673, 1: 2272275, 10944: 2301707, 10945: 2310727, 10946: 2310783, 10949: 2310977}
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | --------------------------------------------------
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | 
[2026-05-05 06:20:32] 2026-05-05 04:19:38,719 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/1
[2026-05-05 06:20:32] 2026-05-05 04:19:38,766 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,768 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 06:20:32] 2026-05-05 04:19:38,769 | INFO     | job 7120686611 has completed (purged errors)
[2026-05-05 06:20:32] 2026-05-05 04:19:38,769 | INFO     | overall cleanup function is called
[2026-05-05 06:20:32] 2026-05-05 04:19:39,776 | INFO     | --- collectZombieJob: --- 10, [3221940]
[2026-05-05 06:20:32] 2026-05-05 04:19:39,776 | INFO     | zombie collector waiting for pid 3221940
[2026-05-05 06:20:32] 2026-05-05 04:19:39,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 06:20:32] 2026-05-05 04:19:39,777 | INFO     | collected zombie processes
[2026-05-05 06:20:32] 2026-05-05 04:19:39,777 | INFO     | will attempt to kill all subprocesses of pid=3221940
[2026-05-05 06:20:32] 2026-05-05 04:19:40,532 | INFO     | process IDs to be killed: [3221940] (in reverse order)
[2026-05-05 06:20:32] 2026-05-05 04:19:40,882 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 06:20:32] 2026-05-05 04:19:40,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 06:20:32] 2026-05-05 04:19:40,906 | INFO     | did not find any defunct processes belonging to 3221940
[2026-05-05 06:20:32] 2026-05-05 04:19:40,927 | INFO     | did not find any defunct processes belonging to 3221940
[2026-05-05 06:20:32] 2026-05-05 04:19:40,927 | INFO     | Ready for new job
[2026-05-05 06:20:32] 2026-05-05 04:19:40,930 | INFO     | ***************************************
[2026-05-05 06:20:32] 2026-05-05 04:19:40,930 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 06:20:32] 2026-05-05 04:19:40,930 | INFO     | ***************************************
[2026-05-05 06:20:32] 2026-05-05 04:19:40,931 | INFO     | 
[2026-05-05 06:20:32] 2026-05-05 04:19:40,939 | INFO     | architecture information:
[2026-05-05 06:20:32] 2026-05-05 04:19:40,940 | INFO     | executing command: cat /etc/os-release
[2026-05-05 06:20:32] 2026-05-05 04:19:40,968 | INFO     | cat /etc/os-release:
[2026-05-05 06:20:32] NAME="CentOS Linux"
[2026-05-05 06:20:32] VERSION="7 (Core)"
[2026-05-05 06:20:32] ID="centos"
[2026-05-05 06:20:32] ID_LIKE="rhel fedora"
[2026-05-05 06:20:32] VERSION_ID="7"
[2026-05-05 06:20:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 06:20:32] ANSI_COLOR="0;31"
[2026-05-05 06:20:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 06:20:32] HOME_URL="https://www.centos.org/"
[2026-05-05 06:20:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 06:20:32] 
[2026-05-05 06:20:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 06:20:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 06:20:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 06:20:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 06:20:32] 
[2026-05-05 06:20:32] 2026-05-05 04:19:40,968 | INFO     | ***************************************
[2026-05-05 06:20:32] 2026-05-05 04:19:41,471 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/1
[2026-05-05 06:20:32] 2026-05-05 04:19:41,501 | INFO     | sufficient remaining disk space (239932014592 B)
[2026-05-05 06:20:32] 2026-05-05 04:19:41,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 06:20:32] 2026-05-05 04:19:41,502 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 06:20:32] 2026-05-05 04:19:41,502 | INFO     | update_server=False
[2026-05-05 06:20:32] 2026-05-05 04:19:41,502 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 06:20:32] 2026-05-05 04:19:41,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 06:20:32] 2026-05-05 04:19:41,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 06:20:32] 2026-05-05 04:19:41,503 | INFO     | aborting loop
[2026-05-05 06:20:32] 2026-05-05 04:19:42,138 | INFO     | all data control threads have been joined
[2026-05-05 06:20:32] 2026-05-05 04:19:42,266 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 06:20:32] 2026-05-05 04:19:42,356 | INFO     | all payload control threads have been joined
[2026-05-05 06:20:32] 2026-05-05 04:19:42,507 | INFO     | [job] retrieve thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:42,508 | INFO     | [job] job monitor thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:42,858 | INFO     | all job control threads have been joined
[2026-05-05 06:20:32] 2026-05-05 04:19:42,880 | INFO     | [payload] validate_post thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,143 | INFO     | [data] control thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,294 | INFO     | [payload] failed_post thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,361 | INFO     | [payload] control thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,380 | INFO     | [data] copytool_in thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,508 | INFO     | [data] copytool_out thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 06:20:32] 2026-05-05 04:19:43,519 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,634 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,762 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,863 | INFO     | [job] control thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:43,936 | INFO     | [job] validate thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:44,514 | INFO     | [job] queue monitor thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:46,272 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:19:51,914 | INFO     | job.realtimelogging is not enabled
[2026-05-05 06:20:32] 2026-05-05 04:19:52,920 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 06:20:32] 2026-05-05 04:20:12,503 | INFO     | PID=3216187 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 06:20:32] 2026-05-05 04:20:12,503 | INFO     | .. there are 25 such processes running
[2026-05-05 06:20:32] 2026-05-05 04:20:12,503 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 06:20:32] 2026-05-05 04:20:12,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 06:20:32] 2026-05-05 04:20:12,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 06:20:32] 2026-05-05 04:20:26,207 | INFO     | [monitor] cgroup control has ended
[2026-05-05 06:20:32] 2026-05-05 04:20:26,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22408558442304)>', '<ExcThread(monitor, started 22408324204288)>']
[2026-05-05 06:20:32] 2026-05-05 04:20:27,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 06:20:32] 2026-05-05 04:20:27,580 | INFO     | [monitor] control thread has ended
[2026-05-05 06:20:32] 2026-05-05 04:20:31,909 | INFO     | all workflow threads have been joined
[2026-05-05 06:20:32] 2026-05-05 04:20:31,909 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 06:20:32] 2026-05-05 04:20:31,909 | INFO     | traces error code: 0
[2026-05-05 06:20:32] 2026-05-05 04:20:31,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 06:20:32] 2026-05-05 04:20:32,069 [wrapper] ==== pilot stdout END ====
[2026-05-05 06:20:32] 2026-05-05 04:20:32,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 06:20:32] 2026-05-05 04:20:32,077 [wrapper] pilotpid: 3216187
[2026-05-05 06:20:32] 2026-05-05 04:20:32,081 [wrapper] Pilot exit status: 0
[2026-05-05 06:20:32] 2026-05-05 04:20:32,100 [wrapper] pandaids: 7120686611
[2026-05-05 06:20:32] 2026-05-05 04:20:32,308 [wrapper] cleanup supervisor_pilot 3680876 3216188
[2026-05-05 06:20:32] 2026-05-05 04:20:32,313 [wrapper] Test setup, not cleaning
[2026-05-05 06:20:32] 2026-05-05 04:20:32,317 [wrapper] apfmon messages muted
[2026-05-05 06:20:32] 2026-05-05 04:20:32,321 [wrapper] ==== wrapper stdout END ====
[2026-05-05 06:20:32] 2026-05-05 04:20:32,325 [wrapper] ==== wrapper stderr END ====
[2026-05-05 06:20:32]  *** Error codes and diagnostics ***
[2026-05-05 06:20:32]     "exeErrorCode": 0,
[2026-05-05 06:20:32]     "pilotErrorCode": 0,
[2026-05-05 06:20:32]  *** Listing of results directory ***
[2026-05-05 06:20:32] total 420240
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc      5631 May  1 18:12 queuedata.json
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc    683926 May  1 18:12 pilot3.tar.gz
[2026-05-05 06:20:32] -rwx------. 1 boinc boinc     36322 May  1 18:13 runpilot2-wrapper.sh
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc       100 May  5 03:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 06:20:32] -rwxr-xr-x. 1 boinc boinc      7986 May  5 03:16 run_atlas
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc       105 May  5 03:16 job.xml
[2026-05-05 06:20:32] -rw-r--r--. 2 boinc boinc 223760898 May  5 03:16 EVNT.49263198._001478.pool.root.1
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc      6540 May  5 03:16 init_data.xml
[2026-05-05 06:20:32] -rw-r--r--. 2 boinc boinc     15667 May  5 03:16 start_atlas.sh
[2026-05-05 06:20:32] drwxrwx--x. 2 boinc boinc      4096 May  5 03:16 shared
[2026-05-05 06:20:32] -rw-r--r--. 2 boinc boinc    697427 May  5 03:16 input.tar.gz
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc         0 May  5 03:16 boinc_lockfile
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc      2574 May  5 03:16 pandaJob.out
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc   1002597 May  5 03:16 agis_schedconf.cvmfs.json
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc       443 May  5 03:17 workernode_map.json
[2026-05-05 06:20:32] drwx------. 5 boinc boinc      4096 May  5 03:17 pilot3
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc 199805990 May  5 06:18 HITS.49263200._081733.pool.root.1
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc        95 May  5 06:19 pilot_heartbeat.json
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc       487 May  5 06:19 boinc_task_state.xml
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc      1031 May  5 06:19 memory_monitor_summary.json
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc   1505918 May  5 06:19 agis_ddmendpoints.agis.ALL.json
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc    316636 May  5 06:19 log.49263200._081733.job.log.tgz.1
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc      6384 May  5 06:19 heartbeat_new.json
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc      6275 May  5 06:19 heartbeat.json
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc      8192 May  5 06:20 boinc_mmap_file
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc        27 May  5 06:20 wrapper_checkpoint.txt
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc      4906 May  5 06:20 pilotlog.txt
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc    994899 May  5 06:20 log.49263200._081733.job.log.1
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc       357 May  5 06:20 output.list
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc       410 May  5 06:20 runtime_log
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc   1331200 May  5 06:20 result.tar.gz
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc      8828 May  5 06:20 runtime_log.err
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc       665 May  5 06:20 d11852e63e58.diag
[2026-05-05 06:20:32] -rw-r--r--. 1 boinc boinc     21041 May  5 06:20 stderr.txt
[2026-05-05 06:20:32] HITS file was successfully produced:
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc 199805990 May  5 06:18 shared/HITS.pool.root.1
[2026-05-05 06:20:32]  *** Contents of shared directory: ***
[2026-05-05 06:20:32] total 415652
[2026-05-05 06:20:32] -rw-r--r--. 2 boinc boinc 223760898 May  5 03:16 ATLAS.root_0
[2026-05-05 06:20:32] -rw-r--r--. 2 boinc boinc     15667 May  5 03:16 start_atlas.sh
[2026-05-05 06:20:32] -rw-r--r--. 2 boinc boinc    697427 May  5 03:16 input.tar.gz
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc 199805990 May  5 06:18 HITS.pool.root.1
[2026-05-05 06:20:32] -rw-------. 1 boinc boinc   1331200 May  5 06:20 result.tar.gz
06:20:34 (3211538): run_atlas exited; CPU time 40334.938935
06:20:34 (3211538): called boinc_finish(0)

</stderr_txt>
]]>

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