Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:14:03 (31645): wrapper (7.7.26015): starting
04:14:03 (31645): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 04:14:03] Arguments: --nthreads 8
[2026-05-02 04:14:03] Threads: 8
[2026-05-02 04:14:03] Checking for CVMFS
[2026-05-02 04:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 04:14:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 04:14:05] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 04:14:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 04:14:06] 2.11.2.0 21848 23596 96912 159116 2 53 18322782 25165825 1088 130560 0 7023782 99.843 7093180 5237 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 04:14:06] CVMFS is ok
[2026-05-02 04:14:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 04:14:06] Checking for apptainer binary...
[2026-05-02 04:14:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 04:14:06] Running /usr/bin/apptainer --version
[2026-05-02 04:14:07] apptainer version 1.3.2-1.el7
[2026-05-02 04:14:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 04:14:41] cg-vwn454.simple-grid.lan
[2026-05-02 04:14:41] apptainer works
[2026-05-02 04:14:42] Set ATHENA_PROC_NUMBER=8
[2026-05-02 04:14:42] Set ATHENA_CORE_NUMBER=8
[2026-05-02 04:14:42] Starting ATLAS job with PandaID=7120671015
[2026-05-02 04:14:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 06:15:44]  *** The last 200 lines of the pilot log: ***
[2026-05-02 06:15:44] 2026-05-02 04:15:12,427 | INFO     | total number of processed events: 400 (read)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,429 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7120671015/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,429 | INFO     | extracted standard info from prmon json
[2026-05-02 06:15:44] 2026-05-02 04:15:12,430 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 06:15:44] 2026-05-02 04:15:12,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 06:15:44] 2026-05-02 04:15:12,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 06:15:44] 2026-05-02 04:15:12,433 | INFO     | fitting pss+swap vs Time
[2026-05-02 06:15:44] 2026-05-02 04:15:12,433 | INFO     | sum of square deviations: 424045160.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,434 | INFO     | sum of deviations: -10282728459.000004
[2026-05-02 06:15:44] 2026-05-02 04:15:12,434 | INFO     | mean x (centered): 0.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,434 | INFO     | mean y: 2573591.864864865
[2026-05-02 06:15:44] 2026-05-02 04:15:12,435 | INFO     | intersect: 2573591.864864865
[2026-05-02 06:15:44] 2026-05-02 04:15:12,435 | INFO     | chi2: 2.491201028674786
[2026-05-02 06:15:44] 2026-05-02 04:15:12,435 | INFO     | sum of square deviations: 369281342.5
[2026-05-02 06:15:44] 2026-05-02 04:15:12,436 | INFO     | sum of deviations: -1457239980.000001
[2026-05-02 06:15:44] 2026-05-02 04:15:12,436 | INFO     | mean x (centered): 0.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,436 | INFO     | mean y: 2597430.7924528304
[2026-05-02 06:15:44] 2026-05-02 04:15:12,437 | INFO     | intersect: 2597430.7924528304
[2026-05-02 06:15:44] 2026-05-02 04:15:12,437 | INFO     | chi2: 1.7373526230424507
[2026-05-02 06:15:44] 2026-05-02 04:15:12,437 | INFO     | current chi2=1.7373526230424507 (change=30.260440524679407 %)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,437 | INFO     | sum of square deviations: 319447850.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,438 | INFO     | sum of deviations: -113533870.99999881
[2026-05-02 06:15:44] 2026-05-02 04:15:12,438 | INFO     | mean x (centered): 0.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,438 | INFO     | mean y: 2601545.871287129
[2026-05-02 06:15:44] 2026-05-02 04:15:12,438 | INFO     | intersect: 2601545.871287129
[2026-05-02 06:15:44] 2026-05-02 04:15:12,439 | INFO     | chi2: 1.7405783860045199
[2026-05-02 06:15:44] 2026-05-02 04:15:12,439 | INFO     | current chi2=1.7405783860045199 (change=-0.18567117114199638 %)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,439 | INFO     | right removable region: 100
[2026-05-02 06:15:44] 2026-05-02 04:15:12,439 | INFO     | sum of square deviations: 369281342.5
[2026-05-02 06:15:44] 2026-05-02 04:15:12,440 | INFO     | sum of deviations: -28259422298.000008
[2026-05-02 06:15:44] 2026-05-02 04:15:12,440 | INFO     | mean x (centered): 0.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,440 | INFO     | mean y: 2622680.433962264
[2026-05-02 06:15:44] 2026-05-02 04:15:12,440 | INFO     | intersect: 2622680.433962264
[2026-05-02 06:15:44] 2026-05-02 04:15:12,441 | INFO     | chi2: 0.9046415549720832
[2026-05-02 06:15:44] 2026-05-02 04:15:12,441 | INFO     | current chi2=0.9046415549720832 (change=63.68652932624572 %)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,441 | INFO     | sum of square deviations: 319447850.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,442 | INFO     | sum of deviations: -27611364885.999996
[2026-05-02 06:15:44] 2026-05-02 04:15:12,442 | INFO     | mean x (centered): 0.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,442 | INFO     | mean y: 2620565.495049505
[2026-05-02 06:15:44] 2026-05-02 04:15:12,442 | INFO     | intersect: 2620565.495049505
[2026-05-02 06:15:44] 2026-05-02 04:15:12,442 | INFO     | chi2: 0.8767854991212881
[2026-05-02 06:15:44] 2026-05-02 04:15:12,443 | INFO     | current chi2=0.8767854991212881 (change=3.0792368201187394 %)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,443 | INFO     | left removable region: 10
[2026-05-02 06:15:44] 2026-05-02 04:15:12,443 | INFO     | sum of square deviations: 226022842.5
[2026-05-02 06:15:44] 2026-05-02 04:15:12,444 | INFO     | sum of deviations: -16460888857.000002
[2026-05-02 06:15:44] 2026-05-02 04:15:12,444 | INFO     | mean x (centered): 0.0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,444 | INFO     | mean y: 2658336.1333333333
[2026-05-02 06:15:44] 2026-05-02 04:15:12,444 | INFO     | intersect: 2658336.1333333333
[2026-05-02 06:15:44] 2026-05-02 04:15:12,444 | INFO     | chi2: 0.07797391315430731
[2026-05-02 06:15:44] 2026-05-02 04:15:12,444 | INFO     | current memory leak: -72.83 B/s (using 90 data points, chi2=0.08)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,445 | INFO     | could have reported an average CPU frequency of 2250 MHz (7 samples)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,445 | INFO     | ..............................
[2026-05-02 06:15:44] 2026-05-02 04:15:12,445 | INFO     | . Timing measurements:
[2026-05-02 06:15:44] 2026-05-02 04:15:12,445 | INFO     | . get job = 0 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,445 | INFO     | . initial setup = 117 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,446 | INFO     | . payload setup = 96 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,446 | INFO     | . stage-in = 0 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,446 | INFO     | . payload execution = 6720 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,446 | INFO     | . stage-out = 0 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,446 | INFO     | . log creation = 0 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,446 | INFO     | ..............................
[2026-05-02 06:15:44] 2026-05-02 04:15:12,559 | INFO     | 
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | job summary report
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | --------------------------------------------------
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | PanDA job id: 7120671015
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | task id: 49263191
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | errors: (none)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | pilot state: finished 
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | transexitcode: 0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | exeerrorcode: 0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | exeerrordiag: 
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | exitcode: 0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | exitmsg: OK
[2026-05-02 06:15:44] 2026-05-02 04:15:12,560 | INFO     | cpuconsumptiontime: 49578 s
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | nevents: 400
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | neventsw: 0
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | pid: 7752
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | pgrp: 7752
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | corecount: 8
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | event service: False
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | sizes: {0: 2275357, 1: 2277186, 12: 2277186, 6821: 2304414, 6822: 2313412, 6826: 2313790}
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | --------------------------------------------------
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | 
[2026-05-02 06:15:44] 2026-05-02 04:15:12,561 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-05-02 06:15:44] 2026-05-02 04:15:12,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,591 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 06:15:44] 2026-05-02 04:15:12,591 | INFO     | job 7120671015 has completed (purged errors)
[2026-05-02 06:15:44] 2026-05-02 04:15:12,591 | INFO     | overall cleanup function is called
[2026-05-02 06:15:44] 2026-05-02 04:15:13,599 | INFO     | --- collectZombieJob: --- 10, [7752]
[2026-05-02 06:15:44] 2026-05-02 04:15:13,599 | INFO     | zombie collector waiting for pid 7752
[2026-05-02 06:15:44] 2026-05-02 04:15:13,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 06:15:44] 2026-05-02 04:15:13,599 | INFO     | collected zombie processes
[2026-05-02 06:15:44] 2026-05-02 04:15:13,599 | INFO     | will attempt to kill all subprocesses of pid=7752
[2026-05-02 06:15:44] 2026-05-02 04:15:13,670 | INFO     | process IDs to be killed: [7752] (in reverse order)
[2026-05-02 06:15:44] 2026-05-02 04:15:13,731 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 06:15:44] 2026-05-02 04:15:13,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 06:15:44] 2026-05-02 04:15:13,733 | INFO     | did not find any defunct processes belonging to 7752
[2026-05-02 06:15:44] 2026-05-02 04:15:13,735 | INFO     | did not find any defunct processes belonging to 7752
[2026-05-02 06:15:44] 2026-05-02 04:15:13,736 | INFO     | Ready for new job
[2026-05-02 06:15:44] 2026-05-02 04:15:13,737 | INFO     | ***************************************
[2026-05-02 06:15:44] 2026-05-02 04:15:13,737 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 06:15:44] 2026-05-02 04:15:13,738 | INFO     | ***************************************
[2026-05-02 06:15:44] 2026-05-02 04:15:13,738 | INFO     | 
[2026-05-02 06:15:44] 2026-05-02 04:15:13,738 | INFO     | pilot is running in a VM
[2026-05-02 06:15:44] 2026-05-02 04:15:13,738 | INFO     | architecture information:
[2026-05-02 06:15:44] 2026-05-02 04:15:13,739 | INFO     | executing command: cat /etc/os-release
[2026-05-02 06:15:44] 2026-05-02 04:15:13,760 | INFO     | cat /etc/os-release:
[2026-05-02 06:15:44] NAME="CentOS Linux"
[2026-05-02 06:15:44] VERSION="7 (Core)"
[2026-05-02 06:15:44] ID="centos"
[2026-05-02 06:15:44] ID_LIKE="rhel fedora"
[2026-05-02 06:15:44] VERSION_ID="7"
[2026-05-02 06:15:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 06:15:44] ANSI_COLOR="0;31"
[2026-05-02 06:15:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 06:15:44] HOME_URL="https://www.centos.org/"
[2026-05-02 06:15:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 06:15:44] 
[2026-05-02 06:15:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 06:15:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 06:15:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 06:15:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 06:15:44] 
[2026-05-02 06:15:44] 2026-05-02 04:15:13,760 | INFO     | ***************************************
[2026-05-02 06:15:44] 2026-05-02 04:15:14,263 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-05-02 06:15:44] 2026-05-02 04:15:14,291 | INFO     | sufficient remaining disk space (497882759168 B)
[2026-05-02 06:15:44] 2026-05-02 04:15:14,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 06:15:44] 2026-05-02 04:15:14,291 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 06:15:44] 2026-05-02 04:15:14,291 | INFO     | update_server=False
[2026-05-02 06:15:44] 2026-05-02 04:15:14,291 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 06:15:44] 2026-05-02 04:15:14,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 06:15:44] 2026-05-02 04:15:14,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 06:15:44] 2026-05-02 04:15:14,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:15:44] 2026-05-02 04:15:14,367 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 06:15:44] 2026-05-02 04:15:14,367 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 06:15:44] 2026-05-02 04:15:14,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:15:44] 2026-05-02 04:15:14,367 | INFO     | will abort loop
[2026-05-02 06:15:44] 2026-05-02 04:15:14,573 | INFO     | all payload control threads have been joined
[2026-05-02 06:15:44] 2026-05-02 04:15:14,647 | INFO     | all data control threads have been joined
[2026-05-02 06:15:44] 2026-05-02 04:15:15,298 | INFO     | [job] retrieve thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:15,300 | INFO     | [job] queue monitor thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:15,372 | INFO     | [job] job monitor thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:15,578 | INFO     | [payload] control thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:15,630 | INFO     | all job control threads have been joined
[2026-05-02 06:15:44] 2026-05-02 04:15:15,652 | INFO     | [data] control thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:15,946 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,004 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,027 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,254 | INFO     | [job] validate thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,304 | INFO     | [data] copytool_out thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,489 | INFO     | [payload] failed_post thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,598 | INFO     | [payload] validate_post thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,635 | INFO     | [job] control thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:16,733 | INFO     | [data] copytool_in thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:18,305 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:24,642 | INFO     | [monitor] cgroup control has ended
[2026-05-02 06:15:44] 2026-05-02 04:15:25,129 | INFO     | job.realtimelogging is not enabled
[2026-05-02 06:15:44] 2026-05-02 04:15:26,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 06:15:44] 2026-05-02 04:15:27,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861660817216)>', '<ExcThread(monitor, started 139861205952256)>']
[2026-05-02 06:15:44] 2026-05-02 04:15:32,314 | INFO     | all workflow threads have been joined
[2026-05-02 06:15:44] 2026-05-02 04:15:32,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 06:15:44] 2026-05-02 04:15:32,314 | INFO     | traces error code: 0
[2026-05-02 06:15:44] 2026-05-02 04:15:32,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 06:15:44] 2026-05-02 04:15:43,886 | INFO     | PID=3267 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 06:15:44] 2026-05-02 04:15:43,886 | INFO     | .. there are 2 such processes running
[2026-05-02 06:15:44] 2026-05-02 04:15:43,887 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 06:15:44] 2026-05-02 04:15:43,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 06:15:44] 2026-05-02 04:15:43,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 06:15:44] 2026-05-02 04:15:43,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 06:15:44] 2026-05-02 04:15:43,887 | CRITICAL | thread 'MainThread' is not alive
[2026-05-02 06:15:44] 2026-05-02 04:15:43,887 | INFO     | [monitor] control thread has ended
[2026-05-02 06:15:44] 2026-05-02 04:15:44,035 [wrapper] ==== pilot stdout END ====
[2026-05-02 06:15:44] 2026-05-02 04:15:44,041 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 06:15:44] 2026-05-02 04:15:44,045 [wrapper] pilotpid: 3267
[2026-05-02 06:15:44] 2026-05-02 04:15:44,052 [wrapper] Pilot exit status: 0
[2026-05-02 06:15:44] 2026-05-02 04:15:44,073 [wrapper] pandaids: 7120671015
[2026-05-02 06:15:44] 2026-05-02 04:15:44,114 [wrapper] cleanup supervisor_pilot 29360 3268
[2026-05-02 06:15:44] 2026-05-02 04:15:44,120 [wrapper] Test setup, not cleaning
[2026-05-02 06:15:44] 2026-05-02 04:15:44,129 [wrapper] apfmon messages muted
[2026-05-02 06:15:44] 2026-05-02 04:15:44,134 [wrapper] ==== wrapper stdout END ====
[2026-05-02 06:15:44] 2026-05-02 04:15:44,138 [wrapper] ==== wrapper stderr END ====
[2026-05-02 06:15:44]  *** Error codes and diagnostics ***
[2026-05-02 06:15:44]     "exeErrorCode": 0,
[2026-05-02 06:15:44]     "pilotErrorCode": 0,
[2026-05-02 06:15:44]  *** Listing of results directory ***
[2026-05-02 06:15:44] total 409744
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc      5631 May  1 18:12 queuedata.json
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc    683926 May  1 18:12 pilot3.tar.gz
[2026-05-02 06:15:44] -rwx------. 1 boinc boinc     36322 May  1 18:13 runpilot2-wrapper.sh
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc       100 May  2 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 06:15:44] -rwxr-xr-x. 1 boinc boinc      7986 May  2 04:14 run_atlas
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc       105 May  2 04:14 job.xml
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc      6306 May  2 04:14 init_data.xml
[2026-05-02 06:15:44] -rw-r--r--. 2 boinc boinc 223455059 May  2 04:14 EVNT.49263189._001982.pool.root.1
[2026-05-02 06:15:44] -rw-r--r--. 2 boinc boinc     15667 May  2 04:14 start_atlas.sh
[2026-05-02 06:15:44] drwxrwx--x. 2 boinc boinc        68 May  2 04:14 shared
[2026-05-02 06:15:44] -rw-r--r--. 2 boinc boinc    697423 May  2 04:14 input.tar.gz
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc         0 May  2 04:14 boinc_lockfile
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc      2576 May  2 04:14 pandaJob.out
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc   1508687 May  2 04:19 agis_ddmendpoints.agis.ALL.json
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc       413 May  2 04:21 workernode_map.json
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc   1002984 May  2 04:21 agis_schedconf.cvmfs.json
[2026-05-02 06:15:44] drwx------. 5 boinc boinc      4096 May  2 04:21 pilot3
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc 190005510 May  2 06:14 HITS.49263191._087622.pool.root.1
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc        95 May  2 06:14 pilot_heartbeat.json
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc       487 May  2 06:14 boinc_task_state.xml
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc      1018 May  2 06:15 memory_monitor_summary.json
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc    338699 May  2 06:15 log.49263191._087622.job.log.tgz.1
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc      6342 May  2 06:15 heartbeat_new.json
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc      6233 May  2 06:15 heartbeat.json
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc        27 May  2 06:15 wrapper_checkpoint.txt
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc      8192 May  2 06:15 boinc_mmap_file
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc       889 May  2 06:15 pilotlog.txt
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc    661769 May  2 06:15 log.49263191._087622.job.log.1
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc       357 May  2 06:15 output.list
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc       410 May  2 06:15 runtime_log
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc   1013760 May  2 06:15 result.tar.gz
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc      8438 May  2 06:15 runtime_log.err
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc       652 May  2 06:15 d10c372822a4.diag
[2026-05-02 06:15:44] -rw-r--r--. 1 boinc boinc     20573 May  2 06:15 stderr.txt
[2026-05-02 06:15:44] HITS file was successfully produced:
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc 190005510 May  2 06:14 shared/HITS.pool.root.1
[2026-05-02 06:15:44]  *** Contents of shared directory: ***
[2026-05-02 06:15:44] total 405468
[2026-05-02 06:15:44] -rw-r--r--. 2 boinc boinc 223455059 May  2 04:14 ATLAS.root_0
[2026-05-02 06:15:44] -rw-r--r--. 2 boinc boinc     15667 May  2 04:14 start_atlas.sh
[2026-05-02 06:15:44] -rw-r--r--. 2 boinc boinc    697423 May  2 04:14 input.tar.gz
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc 190005510 May  2 06:14 HITS.pool.root.1
[2026-05-02 06:15:44] -rw-------. 1 boinc boinc   1013760 May  2 06:15 result.tar.gz
06:15:45 (31645): run_atlas exited; CPU time 49621.431552
06:15:45 (31645): called boinc_finish(0)

</stderr_txt>
]]>

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