Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:11 (31049): wrapper (7.7.26015): starting
05:18:11 (31049): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 05:18:11] Arguments: --nthreads 8
[2026-05-02 05:18:11] Threads: 8
[2026-05-02 05:18:11] Checking for CVMFS
[2026-05-02 05:18:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 05:18:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 05:18:12] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 05:18:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 05:18:12] 2.11.2.0 8583 23654 99804 159118 2 53 18894479 25165824 96 130560 0 8930550 99.918 2595233 2973 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 05:18:12] CVMFS is ok
[2026-05-02 05:18:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 05:18:12] Checking for apptainer binary...
[2026-05-02 05:18:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 05:18:12] Running /usr/bin/apptainer --version
[2026-05-02 05:18:12] apptainer version 1.3.2-1.el7
[2026-05-02 05:18:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 05:18:14] cg-vwn390.simple-grid.lan
[2026-05-02 05:18:14] apptainer works
[2026-05-02 05:18:14] Set ATHENA_PROC_NUMBER=8
[2026-05-02 05:18:14] Set ATHENA_CORE_NUMBER=8
[2026-05-02 05:18:14] Starting ATLAS job with PandaID=7125027633
[2026-05-02 05:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 08:27:12]  *** The last 200 lines of the pilot log: ***
[2026-05-02 08:27:12] 2026-05-02 06:26:27,162 | INFO     | log transfer has been attempted: DONE
[2026-05-02 08:27:12] 2026-05-02 06:26:27,162 | INFO     | job 7125027633 has finished - writing final server update
[2026-05-02 08:27:12] 2026-05-02 06:26:27,162 | INFO     | total number of processed events: 400 (read)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,165 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7125027633/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,165 | INFO     | extracted standard info from prmon json
[2026-05-02 08:27:12] 2026-05-02 06:26:27,166 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 08:27:12] 2026-05-02 06:26:27,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 08:27:12] 2026-05-02 06:26:27,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 08:27:12] 2026-05-02 06:26:27,170 | INFO     | fitting pss+swap vs Time
[2026-05-02 08:27:12] 2026-05-02 06:26:27,171 | INFO     | sum of square deviations: 1963274020.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,172 | INFO     | sum of deviations: -42212114131.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,172 | INFO     | mean x (centered): 0.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,173 | INFO     | mean y: 2543925.627027027
[2026-05-02 08:27:12] 2026-05-02 06:26:27,173 | INFO     | intersect: 2543925.627027027
[2026-05-02 08:27:12] 2026-05-02 06:26:27,173 | INFO     | chi2: 3.4318306546431683
[2026-05-02 08:27:12] 2026-05-02 06:26:27,178 | INFO     | sum of square deviations: 1808350185.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,179 | INFO     | sum of deviations: -15948177482.5
[2026-05-02 08:27:12] 2026-05-02 06:26:27,179 | INFO     | mean x (centered): 0.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,180 | INFO     | mean y: 2569378.5166666666
[2026-05-02 08:27:12] 2026-05-02 06:26:27,180 | INFO     | intersect: 2569378.5166666666
[2026-05-02 08:27:12] 2026-05-02 06:26:27,180 | INFO     | chi2: 1.8456126755206088
[2026-05-02 08:27:12] 2026-05-02 06:26:27,180 | INFO     | current chi2=1.8456126755206088 (change=46.220753258219546 %)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,181 | INFO     | sum of square deviations: 1661798600.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,182 | INFO     | sum of deviations: -14957178649.999992
[2026-05-02 08:27:12] 2026-05-02 06:26:27,182 | INFO     | mean x (centered): 0.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,182 | INFO     | mean y: 2570409.782857143
[2026-05-02 08:27:12] 2026-05-02 06:26:27,182 | INFO     | intersect: 2570409.782857143
[2026-05-02 08:27:12] 2026-05-02 06:26:27,183 | INFO     | chi2: 1.844673099624264
[2026-05-02 08:27:12] 2026-05-02 06:26:27,183 | INFO     | current chi2=1.844673099624264 (change=0.05090861743674483 %)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,183 | INFO     | right removable region: 174
[2026-05-02 08:27:12] 2026-05-02 06:26:27,184 | INFO     | sum of square deviations: 1808350185.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,185 | INFO     | sum of deviations: -72686731085.5
[2026-05-02 08:27:12] 2026-05-02 06:26:27,185 | INFO     | mean x (centered): 0.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,185 | INFO     | mean y: 2573577.738888889
[2026-05-02 08:27:12] 2026-05-02 06:26:27,185 | INFO     | intersect: 2573577.738888889
[2026-05-02 08:27:12] 2026-05-02 06:26:27,186 | INFO     | chi2: 1.84662321660982
[2026-05-02 08:27:12] 2026-05-02 06:26:27,186 | INFO     | current chi2=1.84662321660982 (change=46.19130713482637 %)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,186 | INFO     | sum of square deviations: 1661798600.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,188 | INFO     | sum of deviations: -71925974008.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,188 | INFO     | mean x (centered): 0.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,188 | INFO     | mean y: 2572724.4342857143
[2026-05-02 08:27:12] 2026-05-02 06:26:27,188 | INFO     | intersect: 2572724.4342857143
[2026-05-02 08:27:12] 2026-05-02 06:26:27,189 | INFO     | chi2: 1.8203722938693945
[2026-05-02 08:27:12] 2026-05-02 06:26:27,189 | INFO     | current chi2=1.8203722938693945 (change=1.4215635601408214 %)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,189 | INFO     | left removable region: 10
[2026-05-02 08:27:12] 2026-05-02 06:26:27,189 | INFO     | sum of square deviations: 1367709365.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,190 | INFO     | sum of deviations: -44207004755.99999
[2026-05-02 08:27:12] 2026-05-02 06:26:27,191 | INFO     | mean x (centered): 0.0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,191 | INFO     | mean y: 2602971.6219512196
[2026-05-02 08:27:12] 2026-05-02 06:26:27,191 | INFO     | intersect: 2602971.6219512196
[2026-05-02 08:27:12] 2026-05-02 06:26:27,191 | INFO     | chi2: 0.16227889379179164
[2026-05-02 08:27:12] 2026-05-02 06:26:27,192 | INFO     | current memory leak: -32.32 B/s (using 164 data points, chi2=0.16)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,192 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,192 | INFO     | ..............................
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . Timing measurements:
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . get job = 0 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . initial setup = 8 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . payload setup = 16 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . stage-in = 0 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . payload execution = 11234 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . stage-out = 4 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | . log creation = 1 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,193 | INFO     | ..............................
[2026-05-02 08:27:12] 2026-05-02 06:26:27,412 | INFO     | 
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | job summary report
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | --------------------------------------------------
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | PanDA job id: 7125027633
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | task id: 49863851
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | errors: (none)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 08:27:12] 2026-05-02 06:26:27,413 | INFO     | pilot state: finished 
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | transexitcode: 0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | exeerrorcode: 0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | exeerrordiag: 
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | exitcode: 0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | exitmsg: OK
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | cpuconsumptiontime: 82517 s
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | nevents: 400
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | neventsw: 0
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | pid: 7086
[2026-05-02 08:27:12] 2026-05-02 06:26:27,414 | INFO     | pgrp: 7086
[2026-05-02 08:27:12] 2026-05-02 06:26:27,415 | INFO     | corecount: 8
[2026-05-02 08:27:12] 2026-05-02 06:26:27,415 | INFO     | event service: False
[2026-05-02 08:27:12] 2026-05-02 06:26:27,415 | INFO     | sizes: {0: 2275335, 1: 2277164, 11256: 2306483, 11261: 2315537, 11264: 2315675}
[2026-05-02 08:27:12] 2026-05-02 06:26:27,415 | INFO     | --------------------------------------------------
[2026-05-02 08:27:12] 2026-05-02 06:26:27,415 | INFO     | 
[2026-05-02 08:27:12] 2026-05-02 06:26:27,415 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 08:27:12] 2026-05-02 06:26:27,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,844 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 08:27:12] 2026-05-02 06:26:27,844 | INFO     | job 7125027633 has completed (purged errors)
[2026-05-02 08:27:12] 2026-05-02 06:26:27,844 | INFO     | overall cleanup function is called
[2026-05-02 08:27:12] 2026-05-02 06:26:28,293 | INFO     | PID=2652 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 08:27:12] 2026-05-02 06:26:28,294 | INFO     | .. there are 2 such processes running
[2026-05-02 08:27:12] 2026-05-02 06:26:28,852 | INFO     | --- collectZombieJob: --- 10, [7086]
[2026-05-02 08:27:12] 2026-05-02 06:26:28,853 | INFO     | zombie collector waiting for pid 7086
[2026-05-02 08:27:12] 2026-05-02 06:26:28,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 08:27:12] 2026-05-02 06:26:28,853 | INFO     | collected zombie processes
[2026-05-02 08:27:12] 2026-05-02 06:26:28,853 | INFO     | will attempt to kill all subprocesses of pid=7086
[2026-05-02 08:27:12] 2026-05-02 06:26:28,912 | INFO     | process IDs to be killed: [7086] (in reverse order)
[2026-05-02 08:27:12] 2026-05-02 06:26:29,851 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 08:27:12] 2026-05-02 06:26:29,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 08:27:12] 2026-05-02 06:26:29,859 | INFO     | did not find any defunct processes belonging to 7086
[2026-05-02 08:27:12] 2026-05-02 06:26:29,860 | INFO     | did not find any defunct processes belonging to 7086
[2026-05-02 08:27:12] 2026-05-02 06:26:29,861 | INFO     | Ready for new job
[2026-05-02 08:27:12] 2026-05-02 06:26:29,862 | INFO     | ***************************************
[2026-05-02 08:27:12] 2026-05-02 06:26:29,863 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 08:27:12] 2026-05-02 06:26:29,863 | INFO     | ***************************************
[2026-05-02 08:27:12] 2026-05-02 06:26:29,863 | INFO     | 
[2026-05-02 08:27:12] 2026-05-02 06:26:29,863 | INFO     | pilot is running in a VM
[2026-05-02 08:27:12] 2026-05-02 06:26:29,864 | INFO     | architecture information:
[2026-05-02 08:27:12] 2026-05-02 06:26:29,868 | INFO     | executing command: cat /etc/os-release
[2026-05-02 08:27:12] 2026-05-02 06:26:30,021 | INFO     | cat /etc/os-release:
[2026-05-02 08:27:12] NAME="CentOS Linux"
[2026-05-02 08:27:12] VERSION="7 (Core)"
[2026-05-02 08:27:12] ID="centos"
[2026-05-02 08:27:12] ID_LIKE="rhel fedora"
[2026-05-02 08:27:12] VERSION_ID="7"
[2026-05-02 08:27:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 08:27:12] ANSI_COLOR="0;31"
[2026-05-02 08:27:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 08:27:12] HOME_URL="https://www.centos.org/"
[2026-05-02 08:27:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 08:27:12] 
[2026-05-02 08:27:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 08:27:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 08:27:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 08:27:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 08:27:12] 
[2026-05-02 08:27:12] 2026-05-02 06:26:30,021 | INFO     | ***************************************
[2026-05-02 08:27:12] 2026-05-02 06:26:30,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 08:27:12] 2026-05-02 06:26:30,753 | INFO     | sufficient remaining disk space (497288216576 B)
[2026-05-02 08:27:12] 2026-05-02 06:26:30,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 08:27:12] 2026-05-02 06:26:30,754 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 08:27:12] 2026-05-02 06:26:30,754 | INFO     | update_server=False
[2026-05-02 08:27:12] 2026-05-02 06:26:30,754 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 08:27:12] 2026-05-02 06:26:30,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 08:27:12] 2026-05-02 06:26:30,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 08:27:12] 2026-05-02 06:26:31,062 | INFO     | all job control threads have been joined
[2026-05-02 08:27:12] 2026-05-02 06:26:31,408 | INFO     | all data control threads have been joined
[2026-05-02 08:27:12] 2026-05-02 06:26:31,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:27:12] 2026-05-02 06:26:31,627 | INFO     | aborting loop
[2026-05-02 08:27:12] 2026-05-02 06:26:31,761 | INFO     | [job] retrieve thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:31,901 | INFO     | all payload control threads have been joined
[2026-05-02 08:27:12] 2026-05-02 06:26:32,036 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,069 | INFO     | [job] control thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,291 | INFO     | [job] validate thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:27:12] 2026-05-02 06:26:32,414 | INFO     | [data] control thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,633 | INFO     | [job] job monitor thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,651 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,761 | INFO     | [data] copytool_out thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,907 | INFO     | [payload] control thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:32,944 | INFO     | [payload] validate_post thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:33,053 | INFO     | [data] copytool_in thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:33,062 | INFO     | [payload] failed_post thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:33,232 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:33,347 | INFO     | [job] queue monitor thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:26:34,763 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 08:27:12] 2026-05-02 06:27:00,407 | INFO     | PID=2652 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 08:27:12] 2026-05-02 06:27:00,407 | INFO     | .. there are 2 such processes running
[2026-05-02 08:27:12] 2026-05-02 06:27:00,408 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 08:27:12] 2026-05-02 06:27:00,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 08:27:12] 2026-05-02 06:27:00,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 08:27:12] 2026-05-02 06:27:00,489 | INFO     | [monitor] cgroup control has ended
[2026-05-02 08:27:12] 2026-05-02 06:27:02,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719462520640)>', '<ExcThread(monitor, started 139718507362048)>']
[2026-05-02 08:27:12] 2026-05-02 06:27:02,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 08:27:12] 2026-05-02 06:27:02,420 | INFO     | [monitor] control thread has ended
[2026-05-02 08:27:12] 2026-05-02 06:27:07,323 | INFO     | all workflow threads have been joined
[2026-05-02 08:27:12] 2026-05-02 06:27:07,324 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 08:27:12] 2026-05-02 06:27:07,324 | INFO     | traces error code: 0
[2026-05-02 08:27:12] 2026-05-02 06:27:07,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 08:27:12] 2026-05-02 06:27:07,478 [wrapper] ==== pilot stdout END ====
[2026-05-02 08:27:12] 2026-05-02 06:27:07,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 08:27:12] 2026-05-02 06:27:07,502 [wrapper] pilotpid: 2652
[2026-05-02 08:27:12] 2026-05-02 06:27:07,515 [wrapper] Pilot exit status: 0
[2026-05-02 08:27:12] 2026-05-02 06:27:07,628 [wrapper] pandaids: 7125027633
[2026-05-02 08:27:12] 2026-05-02 06:27:08,760 [wrapper] cleanup supervisor_pilot 32607 2653
[2026-05-02 08:27:12] 2026-05-02 06:27:08,867 [wrapper] Test setup, not cleaning
[2026-05-02 08:27:12] 2026-05-02 06:27:08,961 [wrapper] apfmon messages muted
[2026-05-02 08:27:12] 2026-05-02 06:27:09,064 [wrapper] ==== wrapper stdout END ====
[2026-05-02 08:27:12] 2026-05-02 06:27:09,171 [wrapper] ==== wrapper stderr END ====
[2026-05-02 08:27:12]  *** Error codes and diagnostics ***
[2026-05-02 08:27:12]     "exeErrorCode": 0,
[2026-05-02 08:27:12]     "pilotErrorCode": 0,
[2026-05-02 08:27:12]  *** Listing of results directory ***
[2026-05-02 08:27:12] total 466064
[2026-05-02 08:27:12] -rwx------. 1 boinc boinc     36322 May  1 18:12 runpilot2-wrapper.sh
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc      5631 May  1 18:12 queuedata.json
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc    683926 May  1 18:12 pilot3.tar.gz
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc       100 May  2 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 08:27:12] -rwxr-xr-x. 1 boinc boinc      7986 May  2 05:18 run_atlas
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc       105 May  2 05:18 job.xml
[2026-05-02 08:27:12] -rw-r--r--. 2 boinc boinc 259115383 May  2 05:18 EVNT.49863848._000069.pool.root.1
[2026-05-02 08:27:12] drwxrwx--x. 2 boinc boinc        68 May  2 05:18 shared
[2026-05-02 08:27:12] -rw-r--r--. 2 boinc boinc    697435 May  2 05:18 input.tar.gz
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc      6307 May  2 05:18 init_data.xml
[2026-05-02 08:27:12] -rw-r--r--. 2 boinc boinc     15667 May  2 05:18 start_atlas.sh
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc         0 May  2 05:18 boinc_lockfile
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc      2652 May  2 05:18 pandaJob.out
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc   1002976 May  2 05:18 agis_schedconf.cvmfs.json
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc       415 May  2 05:18 workernode_map.json
[2026-05-02 08:27:12] drwx------. 5 boinc boinc      4096 May  2 05:18 pilot3
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc 211140021 May  2 08:24 HITS.49863851._006089.pool.root.1
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc       488 May  2 08:25 boinc_task_state.xml
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc        95 May  2 08:26 pilot_heartbeat.json
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc      1020 May  2 08:26 memory_monitor_summary.json
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc   1508687 May  2 08:26 agis_ddmendpoints.agis.ALL.json
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc    376549 May  2 08:26 log.49863851._006089.job.log.tgz.1
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc      6340 May  2 08:26 heartbeat_new.json
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc      6231 May  2 08:26 heartbeat.json
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc        28 May  2 08:26 wrapper_checkpoint.txt
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc      8192 May  2 08:26 boinc_mmap_file
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc      4882 May  2 08:27 pilotlog.txt
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc   1063983 May  2 08:27 log.49863851._006089.job.log.1
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc       357 May  2 08:27 output.list
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc       410 May  2 08:27 runtime_log
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc   1454080 May  2 08:27 result.tar.gz
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc      8439 May  2 08:27 runtime_log.err
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc       655 May  2 08:27 d102ed07e447.diag
[2026-05-02 08:27:12] -rw-r--r--. 1 boinc boinc     20661 May  2 08:27 stderr.txt
[2026-05-02 08:27:12] HITS file was successfully produced:
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc 211140021 May  2 08:24 shared/HITS.pool.root.1
[2026-05-02 08:27:12]  *** Contents of shared directory: ***
[2026-05-02 08:27:12] total 461356
[2026-05-02 08:27:12] -rw-r--r--. 2 boinc boinc 259115383 May  2 05:18 ATLAS.root_0
[2026-05-02 08:27:12] -rw-r--r--. 2 boinc boinc    697435 May  2 05:18 input.tar.gz
[2026-05-02 08:27:12] -rw-r--r--. 2 boinc boinc     15667 May  2 05:18 start_atlas.sh
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc 211140021 May  2 08:24 HITS.pool.root.1
[2026-05-02 08:27:12] -rw-------. 1 boinc boinc   1454080 May  2 08:27 result.tar.gz
08:27:14 (31049): run_atlas exited; CPU time 82603.115642
08:27:14 (31049): called boinc_finish(0)

</stderr_txt>
]]>

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