Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:44:51 (3909443): wrapper (7.7.26015): starting
01:44:51 (3909443): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 01:44:51] Arguments: --nthreads 4
[2026-05-03 01:44:51] Threads: 4
[2026-05-03 01:44:51] Checking for CVMFS
[2026-05-03 01:44:51] No cvmfs_config command found, will try listing directly
[2026-05-03 01:44:51] CVMFS is ok
[2026-05-03 01:44:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 01:44:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 01:44:51] Further information can be found at the LHC@home message board.
[2026-05-03 01:44:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 01:44:51] Checking for apptainer binary...
[2026-05-03 01:44:51] which: no apptainer in ((null))
[2026-05-03 01:44:51] apptainer is not installed, using version from CVMFS
[2026-05-03 01:44:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 01:44:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-03 01:44:51] apptainer works
[2026-05-03 01:44:51] Set ATHENA_PROC_NUMBER=4
[2026-05-03 01:44:51] Set ATHENA_CORE_NUMBER=4
[2026-05-03 01:44:51] Starting ATLAS job with PandaID=7121885787
[2026-05-03 01:44:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 06:29:43]  *** The last 200 lines of the pilot log: ***
[2026-05-03 06:29:43] 2026-05-03 04:29:02,880 | INFO     | number of running child processes to parent process 3918737: 1
[2026-05-03 06:29:43] 2026-05-03 04:29:02,881 | INFO     | maximum number of monitored processes: 6
[2026-05-03 06:29:43] 2026-05-03 04:29:05,190 | INFO     | job 7121885787 has state=finished
[2026-05-03 06:29:43] 2026-05-03 04:29:05,190 | INFO     | preparing for final server update for job 7121885787 in state='finished'
[2026-05-03 06:29:43] 2026-05-03 04:29:05,190 | INFO     | reading metadata from: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7121885787/jobReport.json
[2026-05-03 06:29:43] 2026-05-03 04:29:05,192 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/3/workernode_map.json
[2026-05-03 06:29:43] 2026-05-03 04:29:05,193 | INFO     | this job has now completed (state=finished)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,193 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,193 | INFO     | log transfer has been attempted: DONE
[2026-05-03 06:29:43] 2026-05-03 04:29:05,193 | INFO     | job 7121885787 has finished - writing final server update
[2026-05-03 06:29:43] 2026-05-03 04:29:05,194 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2297467/.job.ad'
[2026-05-03 06:29:43] 2026-05-03 04:29:05,194 | INFO     | total number of processed events: 400 (read)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,205 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7121885787/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,206 | INFO     | extracted standard info from prmon json
[2026-05-03 06:29:43] 2026-05-03 04:29:05,206 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 06:29:43] 2026-05-03 04:29:05,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 06:29:43] 2026-05-03 04:29:05,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 06:29:43] 2026-05-03 04:29:05,212 | INFO     | fitting pss+swap vs Time
[2026-05-03 06:29:43] 2026-05-03 04:29:05,212 | INFO     | sum of square deviations: 6734191380.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,214 | INFO     | sum of deviations: 26864368828.99997
[2026-05-03 06:29:43] 2026-05-03 04:29:05,214 | INFO     | mean x (centered): 0.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,214 | INFO     | mean y: 2329564.831541219
[2026-05-03 06:29:43] 2026-05-03 04:29:05,214 | INFO     | intersect: 2329564.831541219
[2026-05-03 06:29:43] 2026-05-03 04:29:05,215 | INFO     | chi2: 1.3524940291983358
[2026-05-03 06:29:43] 2026-05-03 04:29:05,215 | INFO     | sum of square deviations: 6378584712.5
[2026-05-03 06:29:43] 2026-05-03 04:29:05,217 | INFO     | sum of deviations: 26010085301.000004
[2026-05-03 06:29:43] 2026-05-03 04:29:05,218 | INFO     | mean x (centered): 0.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,218 | INFO     | mean y: 2329198.437956204
[2026-05-03 06:29:43] 2026-05-03 04:29:05,218 | INFO     | intersect: 2329198.437956204
[2026-05-03 06:29:43] 2026-05-03 04:29:05,218 | INFO     | chi2: 1.3528862708227607
[2026-05-03 06:29:43] 2026-05-03 04:29:05,218 | INFO     | current chi2=1.3528862708227607 (change=-0.029001357193225767 %)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,218 | INFO     | right removable region: 273
[2026-05-03 06:29:43] 2026-05-03 04:29:05,219 | INFO     | sum of square deviations: 6378584712.5
[2026-05-03 06:29:43] 2026-05-03 04:29:05,221 | INFO     | sum of deviations: -8376462416.000002
[2026-05-03 06:29:43] 2026-05-03 04:29:05,221 | INFO     | mean x (centered): 0.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,221 | INFO     | mean y: 2344533.430656934
[2026-05-03 06:29:43] 2026-05-03 04:29:05,221 | INFO     | intersect: 2344533.430656934
[2026-05-03 06:29:43] 2026-05-03 04:29:05,222 | INFO     | chi2: 0.0431057203649543
[2026-05-03 06:29:43] 2026-05-03 04:29:05,222 | INFO     | current chi2=0.0431057203649543 (change=96.81287167008756 %)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,222 | INFO     | sum of square deviations: 6035722470.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,224 | INFO     | sum of deviations: -5363934044.999999
[2026-05-03 06:29:43] 2026-05-03 04:29:05,224 | INFO     | mean x (centered): 0.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,224 | INFO     | mean y: 2343187.832713755
[2026-05-03 06:29:43] 2026-05-03 04:29:05,224 | INFO     | intersect: 2343187.832713755
[2026-05-03 06:29:43] 2026-05-03 04:29:05,225 | INFO     | chi2: 0.036547877845326156
[2026-05-03 06:29:43] 2026-05-03 04:29:05,225 | INFO     | current chi2=0.036547877845326156 (change=15.213392710077029 %)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,225 | INFO     | left removable region: 10
[2026-05-03 06:29:43] 2026-05-03 04:29:05,226 | INFO     | sum of square deviations: 5640782972.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,227 | INFO     | sum of deviations: -5679390969.999999
[2026-05-03 06:29:43] 2026-05-03 04:29:05,228 | INFO     | mean x (centered): 0.0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,228 | INFO     | mean y: 2343041.6577946767
[2026-05-03 06:29:43] 2026-05-03 04:29:05,228 | INFO     | intersect: 2343041.6577946767
[2026-05-03 06:29:43] 2026-05-03 04:29:05,228 | INFO     | chi2: 0.036317737970410276
[2026-05-03 06:29:43] 2026-05-03 04:29:05,228 | INFO     | current memory leak: -1.01 B/s (using 263 data points, chi2=0.04)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | could have reported an average CPU frequency of 2566 MHz (13 samples)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | ..............................
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | . Timing measurements:
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | . get job = 0 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | . initial setup = 6 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | . payload setup = 10 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,229 | INFO     | . stage-in = 0 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,230 | INFO     | . payload execution = 17005 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,230 | INFO     | . stage-out = 1 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,230 | INFO     | . log creation = 0 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,230 | INFO     | ..............................
[2026-05-03 06:29:43] 2026-05-03 04:29:05,321 | INFO     | 
[2026-05-03 06:29:43] 2026-05-03 04:29:05,321 | INFO     | job summary report
[2026-05-03 06:29:43] 2026-05-03 04:29:05,321 | INFO     | --------------------------------------------------
[2026-05-03 06:29:43] 2026-05-03 04:29:05,322 | INFO     | PanDA job id: 7121885787
[2026-05-03 06:29:43] 2026-05-03 04:29:05,322 | INFO     | task id: 50017111
[2026-05-03 06:29:43] 2026-05-03 04:29:05,322 | INFO     | errors: (none)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | pilot state: finished 
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | transexitcode: 0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | exeerrorcode: 0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | exeerrordiag: 
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | exitcode: 0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | exitmsg: OK
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | cpuconsumptiontime: 65676 s
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | nevents: 400
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | neventsw: 0
[2026-05-03 06:29:43] 2026-05-03 04:29:05,323 | INFO     | pid: 3918737
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | pgrp: 3918737
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | corecount: 4
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | event service: False
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | sizes: {0: 2275292, 1: 2277121, 11: 2277121, 17019: 2308975, 17021: 2317995, 17022: 2318051, 17024: 2318373}
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | --------------------------------------------------
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | 
[2026-05-03 06:29:43] 2026-05-03 04:29:05,324 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-05-03 06:29:43] 2026-05-03 04:29:05,346 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,348 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 06:29:43] 2026-05-03 04:29:05,348 | INFO     | job 7121885787 has completed (purged errors)
[2026-05-03 06:29:43] 2026-05-03 04:29:05,348 | INFO     | overall cleanup function is called
[2026-05-03 06:29:43] 2026-05-03 04:29:06,355 | INFO     | --- collectZombieJob: --- 10, [3918737]
[2026-05-03 06:29:43] 2026-05-03 04:29:06,356 | INFO     | zombie collector waiting for pid 3918737
[2026-05-03 06:29:43] 2026-05-03 04:29:06,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 06:29:43] 2026-05-03 04:29:06,356 | INFO     | collected zombie processes
[2026-05-03 06:29:43] 2026-05-03 04:29:06,356 | INFO     | will attempt to kill all subprocesses of pid=3918737
[2026-05-03 06:29:43] 2026-05-03 04:29:06,670 | INFO     | process IDs to be killed: [3918737] (in reverse order)
[2026-05-03 06:29:43] 2026-05-03 04:29:06,803 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 06:29:43] 2026-05-03 04:29:06,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 06:29:43] 2026-05-03 04:29:06,816 | INFO     | did not find any defunct processes belonging to 3918737
[2026-05-03 06:29:43] 2026-05-03 04:29:06,828 | INFO     | did not find any defunct processes belonging to 3918737
[2026-05-03 06:29:43] 2026-05-03 04:29:06,828 | INFO     | Ready for new job
[2026-05-03 06:29:43] 2026-05-03 04:29:06,830 | INFO     | ***************************************
[2026-05-03 06:29:43] 2026-05-03 04:29:06,831 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 06:29:43] 2026-05-03 04:29:06,831 | INFO     | ***************************************
[2026-05-03 06:29:43] 2026-05-03 04:29:06,831 | INFO     | 
[2026-05-03 06:29:43] 2026-05-03 04:29:06,834 | INFO     | architecture information:
[2026-05-03 06:29:43] 2026-05-03 04:29:06,835 | INFO     | executing command: cat /etc/os-release
[2026-05-03 06:29:43] 2026-05-03 04:29:06,850 | INFO     | cat /etc/os-release:
[2026-05-03 06:29:43] NAME="CentOS Linux"
[2026-05-03 06:29:43] VERSION="7 (Core)"
[2026-05-03 06:29:43] ID="centos"
[2026-05-03 06:29:43] ID_LIKE="rhel fedora"
[2026-05-03 06:29:43] VERSION_ID="7"
[2026-05-03 06:29:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 06:29:43] ANSI_COLOR="0;31"
[2026-05-03 06:29:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 06:29:43] HOME_URL="https://www.centos.org/"
[2026-05-03 06:29:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 06:29:43] 
[2026-05-03 06:29:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 06:29:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 06:29:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 06:29:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 06:29:43] 
[2026-05-03 06:29:43] 2026-05-03 04:29:06,850 | INFO     | ***************************************
[2026-05-03 06:29:43] 2026-05-03 04:29:07,353 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-05-03 06:29:43] 2026-05-03 04:29:07,368 | INFO     | sufficient remaining disk space (46958379008 B)
[2026-05-03 06:29:43] 2026-05-03 04:29:07,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 06:29:43] 2026-05-03 04:29:07,369 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 06:29:43] 2026-05-03 04:29:07,369 | INFO     | update_server=False
[2026-05-03 06:29:43] 2026-05-03 04:29:07,369 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 06:29:43] 2026-05-03 04:29:07,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 06:29:43] 2026-05-03 04:29:07,369 | INFO     | aborting loop
[2026-05-03 06:29:43] 2026-05-03 04:29:07,559 | INFO     | all payload control threads have been joined
[2026-05-03 06:29:43] 2026-05-03 04:29:07,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 06:29:43] 2026-05-03 04:29:08,253 | INFO     | all data control threads have been joined
[2026-05-03 06:29:43] 2026-05-03 04:29:08,374 | INFO     | [job] retrieve thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:08,374 | INFO     | [job] job monitor thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:08,470 | INFO     | [data] copytool_in thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:08,486 | INFO     | [job] validate thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:08,565 | INFO     | [payload] control thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:08,735 | INFO     | all job control threads have been joined
[2026-05-03 06:29:43] 2026-05-03 04:29:08,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 06:29:43] 2026-05-03 04:29:08,884 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:08,977 | INFO     | [payload] failed_post thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:09,139 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:09,259 | INFO     | [data] control thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:09,265 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:09,490 | INFO     | [payload] validate_post thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:09,743 | INFO     | [job] control thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:09,858 | INFO     | [data] copytool_out thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:10,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 06:29:43] 2026-05-03 04:29:11,335 | INFO     | [job] queue monitor thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:12,773 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:18,207 | INFO     | job.realtimelogging is not enabled
[2026-05-03 06:29:43] 2026-05-03 04:29:19,212 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 06:29:43] 2026-05-03 04:29:37,041 | INFO     | [monitor] cgroup control has ended
[2026-05-03 06:29:43] 2026-05-03 04:29:38,180 | INFO     | PID=3913624 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 06:29:43] 2026-05-03 04:29:38,180 | INFO     | .. there are 12 such processes running
[2026-05-03 06:29:43] 2026-05-03 04:29:38,180 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 06:29:43] 2026-05-03 04:29:38,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 06:29:43] 2026-05-03 04:29:38,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 06:29:43] 2026-05-03 04:29:38,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22728587671360)>', '<ExcThread(monitor, started 22728281130752)>']
[2026-05-03 06:29:43] 2026-05-03 04:29:39,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 06:29:43] 2026-05-03 04:29:39,185 | INFO     | [monitor] control thread has ended
[2026-05-03 06:29:43] 2026-05-03 04:29:43,391 | INFO     | all workflow threads have been joined
[2026-05-03 06:29:43] 2026-05-03 04:29:43,392 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 06:29:43] 2026-05-03 04:29:43,392 | INFO     | traces error code: 0
[2026-05-03 06:29:43] 2026-05-03 04:29:43,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 06:29:43] 2026-05-03 04:29:43,539 [wrapper] ==== pilot stdout END ====
[2026-05-03 06:29:43] 2026-05-03 04:29:43,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 06:29:43] 2026-05-03 04:29:43,546 [wrapper] pilotpid: 3913624
[2026-05-03 06:29:43] 2026-05-03 04:29:43,549 [wrapper] Pilot exit status: 0
[2026-05-03 06:29:43] 2026-05-03 04:29:43,560 [wrapper] pandaids: 7121885787
[2026-05-03 06:29:43] 2026-05-03 04:29:43,639 [wrapper] cleanup supervisor_pilot   59641 3913625
[2026-05-03 06:29:43] 2026-05-03 04:29:43,643 [wrapper] Test setup, not cleaning
[2026-05-03 06:29:43] 2026-05-03 04:29:43,645 [wrapper] apfmon messages muted
[2026-05-03 06:29:43] 2026-05-03 04:29:43,648 [wrapper] ==== wrapper stdout END ====
[2026-05-03 06:29:43] 2026-05-03 04:29:43,650 [wrapper] ==== wrapper stderr END ====
[2026-05-03 06:29:43]  *** Error codes and diagnostics ***
[2026-05-03 06:29:43]     "exeErrorCode": 0,
[2026-05-03 06:29:43]     "pilotErrorCode": 0,
[2026-05-03 06:29:43]  *** Listing of results directory ***
[2026-05-03 06:29:43] total 487984
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:51 pilot3.tar.gz
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:56 queuedata.json
[2026-05-03 06:29:43] -rwx------. 1 boinc boinc     36322 Apr 30 11:01 runpilot2-wrapper.sh
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc       100 May  3 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 06:29:43] -rwxr-xr-x. 1 boinc boinc      7986 May  3 01:44 run_atlas
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc       105 May  3 01:44 job.xml
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc      6483 May  3 01:44 init_data.xml
[2026-05-03 06:29:43] -rw-r--r--. 2 boinc boinc 313871431 May  3 01:44 EVNT.50017105._000002.pool.root.1
[2026-05-03 06:29:43] -rw-r--r--. 2 boinc boinc     15667 May  3 01:44 start_atlas.sh
[2026-05-03 06:29:43] drwxrwx--x. 2 boinc boinc      4096 May  3 01:44 shared
[2026-05-03 06:29:43] -rw-r--r--. 2 boinc boinc    697397 May  3 01:44 input.tar.gz
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc         0 May  3 01:44 boinc_lockfile
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc      2525 May  3 01:44 pandaJob.out
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc   1002972 May  3 01:45 agis_schedconf.cvmfs.json
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc       452 May  3 01:45 workernode_map.json
[2026-05-03 06:29:43] drwx------. 5 boinc boinc      4096 May  3 01:45 pilot3
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc 177806874 May  3 06:28 HITS.50017111._000035.pool.root.1
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc       488 May  3 06:28 boinc_task_state.xml
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc        95 May  3 06:28 pilot_heartbeat.json
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc      1032 May  3 06:28 memory_monitor_summary.json
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc   1508687 May  3 06:29 agis_ddmendpoints.agis.ALL.json
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc    359976 May  3 06:29 log.50017111._000035.job.log.tgz.1
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc      6411 May  3 06:29 heartbeat_new.json
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc      6302 May  3 06:29 heartbeat.json
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc      8192 May  3 06:29 boinc_mmap_file
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc        28 May  3 06:29 wrapper_checkpoint.txt
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc      4904 May  3 06:29 pilotlog.txt
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc   1582135 May  3 06:29 log.50017111._000035.job.log.1
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc       357 May  3 06:29 output.list
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc       410 May  3 06:29 runtime_log
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc   1955840 May  3 06:29 result.tar.gz
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc      8828 May  3 06:29 runtime_log.err
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc       665 May  3 06:29 1a60d1629aa6.diag
[2026-05-03 06:29:43] -rw-r--r--. 1 boinc boinc     21038 May  3 06:29 stderr.txt
[2026-05-03 06:29:43] HITS file was successfully produced:
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc 177806874 May  3 06:28 shared/HITS.pool.root.1
[2026-05-03 06:29:43]  *** Contents of shared directory: ***
[2026-05-03 06:29:43] total 482776
[2026-05-03 06:29:43] -rw-r--r--. 2 boinc boinc 313871431 May  3 01:44 ATLAS.root_0
[2026-05-03 06:29:43] -rw-r--r--. 2 boinc boinc     15667 May  3 01:44 start_atlas.sh
[2026-05-03 06:29:43] -rw-r--r--. 2 boinc boinc    697397 May  3 01:44 input.tar.gz
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc 177806874 May  3 06:28 HITS.pool.root.1
[2026-05-03 06:29:43] -rw-------. 1 boinc boinc   1955840 May  3 06:29 result.tar.gz
06:29:45 (3909443): run_atlas exited; CPU time 66332.011531
06:29:45 (3909443): called boinc_finish(0)

</stderr_txt>
]]>

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