Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:36:21 (3680343): wrapper (7.7.26015): starting
22:36:21 (3680343): wrapper: running run_atlas (--nthreads 4)
[2026-05-02 22:36:21] Arguments: --nthreads 4
[2026-05-02 22:36:21] Threads: 4
[2026-05-02 22:36:21] Checking for CVMFS
[2026-05-02 22:36:21] No cvmfs_config command found, will try listing directly
[2026-05-02 22:36:21] CVMFS is ok
[2026-05-02 22:36:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 22:36:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 22:36:21] Further information can be found at the LHC@home message board.
[2026-05-02 22:36:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 22:36:21] Checking for apptainer binary...
[2026-05-02 22:36:21] which: no apptainer in ((null))
[2026-05-02 22:36:21] apptainer is not installed, using version from CVMFS
[2026-05-02 22:36:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 22:36:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-02 22:36:22] apptainer works
[2026-05-02 22:36:22] Set ATHENA_PROC_NUMBER=4
[2026-05-02 22:36:22] Set ATHENA_CORE_NUMBER=4
[2026-05-02 22:36:22] Starting ATLAS job with PandaID=7120580964
[2026-05-02 22:36:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 01:52:06]  *** The last 200 lines of the pilot log: ***
[2026-05-03 01:52:06] 2026-05-02 23:51:14,606 | INFO     | job 7120580964 has state=finished
[2026-05-03 01:52:06] 2026-05-02 23:51:14,606 | INFO     | preparing for final server update for job 7120580964 in state='finished'
[2026-05-03 01:52:06] 2026-05-02 23:51:14,606 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7120580964/jobReport.json
[2026-05-03 01:52:06] 2026-05-02 23:51:14,609 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/0/workernode_map.json
[2026-05-03 01:52:06] 2026-05-02 23:51:14,609 | INFO     | this job has now completed (state=finished)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,609 | INFO     | log transfer has been attempted: DONE
[2026-05-03 01:52:06] 2026-05-02 23:51:14,609 | INFO     | job 7120580964 has finished - writing final server update
[2026-05-03 01:52:06] 2026-05-02 23:51:14,610 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2298232/.job.ad'
[2026-05-03 01:52:06] 2026-05-02 23:51:14,610 | INFO     | total number of processed events: 400 (read)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,623 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7120580964/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,623 | INFO     | extracted standard info from prmon json
[2026-05-03 01:52:06] 2026-05-02 23:51:14,624 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 01:52:06] 2026-05-02 23:51:14,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 01:52:06] 2026-05-02 23:51:14,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 01:52:06] 2026-05-02 23:51:14,628 | INFO     | fitting pss+swap vs Time
[2026-05-03 01:52:06] 2026-05-02 23:51:14,628 | INFO     | sum of square deviations: 2160561440.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,629 | INFO     | sum of deviations: 6000464470.000004
[2026-05-03 01:52:06] 2026-05-02 23:51:14,630 | INFO     | mean x (centered): 0.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,630 | INFO     | mean y: 2331065.4136125655
[2026-05-03 01:52:06] 2026-05-02 23:51:14,630 | INFO     | intersect: 2331065.4136125655
[2026-05-03 01:52:06] 2026-05-02 23:51:14,630 | INFO     | chi2: 1.515192821064239
[2026-05-03 01:52:06] 2026-05-02 23:51:14,631 | INFO     | sum of square deviations: 1995283922.5
[2026-05-03 01:52:06] 2026-05-02 23:51:14,632 | INFO     | sum of deviations: 5692153756.000005
[2026-05-03 01:52:06] 2026-05-02 23:51:14,632 | INFO     | mean x (centered): 0.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,632 | INFO     | mean y: 2330780.8494623657
[2026-05-03 01:52:06] 2026-05-02 23:51:14,632 | INFO     | intersect: 2330780.8494623657
[2026-05-03 01:52:06] 2026-05-02 23:51:14,632 | INFO     | chi2: 1.5155214195154352
[2026-05-03 01:52:06] 2026-05-02 23:51:14,632 | INFO     | current chi2=1.5155214195154352 (change=-0.021686906552623435 %)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,633 | INFO     | right removable region: 185
[2026-05-03 01:52:06] 2026-05-02 23:51:14,633 | INFO     | sum of square deviations: 1995283922.5
[2026-05-03 01:52:06] 2026-05-02 23:51:14,634 | INFO     | sum of deviations: -19989013475.5
[2026-05-03 01:52:06] 2026-05-02 23:51:14,634 | INFO     | mean x (centered): 0.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,634 | INFO     | mean y: 2354739.9731182796
[2026-05-03 01:52:06] 2026-05-02 23:51:14,635 | INFO     | intersect: 2354739.9731182796
[2026-05-03 01:52:06] 2026-05-02 23:51:14,635 | INFO     | chi2: 0.09054882353297099
[2026-05-03 01:52:06] 2026-05-02 23:51:14,635 | INFO     | current chi2=0.09054882353297099 (change=94.02394056557294 %)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,635 | INFO     | sum of square deviations: 1838657730.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,636 | INFO     | sum of deviations: -19383217869.999996
[2026-05-03 01:52:06] 2026-05-02 23:51:14,637 | INFO     | mean x (centered): 0.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,637 | INFO     | mean y: 2354112.718232044
[2026-05-03 01:52:06] 2026-05-02 23:51:14,637 | INFO     | intersect: 2354112.718232044
[2026-05-03 01:52:06] 2026-05-02 23:51:14,637 | INFO     | chi2: 0.08188753388014913
[2026-05-03 01:52:06] 2026-05-02 23:51:14,637 | INFO     | current chi2=0.08188753388014913 (change=9.565325439781194 %)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,637 | INFO     | left removable region: 10
[2026-05-03 01:52:06] 2026-05-02 23:51:14,638 | INFO     | sum of square deviations: 1661798600.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,639 | INFO     | sum of deviations: -18973937821.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,639 | INFO     | mean x (centered): 0.0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,639 | INFO     | mean y: 2354536.234285714
[2026-05-03 01:52:06] 2026-05-02 23:51:14,639 | INFO     | intersect: 2354536.234285714
[2026-05-03 01:52:06] 2026-05-02 23:51:14,639 | INFO     | chi2: 0.07951526097060024
[2026-05-03 01:52:06] 2026-05-02 23:51:14,640 | INFO     | current memory leak: -11.42 B/s (using 175 data points, chi2=0.08)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,640 | INFO     | could have reported an average CPU frequency of 2541 MHz (10 samples)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,640 | INFO     | ..............................
[2026-05-03 01:52:06] 2026-05-02 23:51:14,640 | INFO     | . Timing measurements:
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . get job = 0 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . initial setup = 6 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . payload setup = 12 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . stage-in = 0 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . payload execution = 11641 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . stage-out = 1 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | . log creation = 0 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,641 | INFO     | ..............................
[2026-05-03 01:52:06] 2026-05-02 23:51:14,736 | INFO     | 
[2026-05-03 01:52:06] 2026-05-02 23:51:14,736 | INFO     | job summary report
[2026-05-03 01:52:06] 2026-05-02 23:51:14,736 | INFO     | --------------------------------------------------
[2026-05-03 01:52:06] 2026-05-02 23:51:14,736 | INFO     | PanDA job id: 7120580964
[2026-05-03 01:52:06] 2026-05-02 23:51:14,736 | INFO     | task id: 49718416
[2026-05-03 01:52:06] 2026-05-02 23:51:14,736 | INFO     | errors: (none)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | pilot state: finished 
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | transexitcode: 0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | exeerrorcode: 0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | exeerrordiag: 
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | exitcode: 0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | exitmsg: OK
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | cpuconsumptiontime: 43860 s
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | nevents: 400
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | neventsw: 0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,737 | INFO     | pid: 3689422
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | pgrp: 3689422
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | corecount: 4
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | event service: False
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | sizes: {0: 2275338, 1: 2277167, 11: 2277167, 11659: 2306545, 11660: 2315565, 11661: 2315621, 11663: 2315943}
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | --------------------------------------------------
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | 
[2026-05-03 01:52:06] 2026-05-02 23:51:14,738 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-05-03 01:52:06] 2026-05-02 23:51:14,760 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | job 7120580964 has completed (purged errors)
[2026-05-03 01:52:06] 2026-05-02 23:51:14,762 | INFO     | overall cleanup function is called
[2026-05-03 01:52:06] 2026-05-02 23:51:15,770 | INFO     | --- collectZombieJob: --- 10, [3689422]
[2026-05-03 01:52:06] 2026-05-02 23:51:15,771 | INFO     | zombie collector waiting for pid 3689422
[2026-05-03 01:52:06] 2026-05-02 23:51:15,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 01:52:06] 2026-05-02 23:51:15,771 | INFO     | collected zombie processes
[2026-05-03 01:52:06] 2026-05-02 23:51:15,771 | INFO     | will attempt to kill all subprocesses of pid=3689422
[2026-05-03 01:52:06] 2026-05-02 23:51:16,096 | INFO     | process IDs to be killed: [3689422] (in reverse order)
[2026-05-03 01:52:06] 2026-05-02 23:51:16,225 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 01:52:06] 2026-05-02 23:51:16,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 01:52:06] 2026-05-02 23:51:16,238 | INFO     | did not find any defunct processes belonging to 3689422
[2026-05-03 01:52:06] 2026-05-02 23:51:16,251 | INFO     | did not find any defunct processes belonging to 3689422
[2026-05-03 01:52:06] 2026-05-02 23:51:16,251 | INFO     | Ready for new job
[2026-05-03 01:52:06] 2026-05-02 23:51:16,253 | INFO     | ***************************************
[2026-05-03 01:52:06] 2026-05-02 23:51:16,253 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 01:52:06] 2026-05-02 23:51:16,253 | INFO     | ***************************************
[2026-05-03 01:52:06] 2026-05-02 23:51:16,253 | INFO     | 
[2026-05-03 01:52:06] 2026-05-02 23:51:16,257 | INFO     | architecture information:
[2026-05-03 01:52:06] 2026-05-02 23:51:16,258 | INFO     | executing command: cat /etc/os-release
[2026-05-03 01:52:06] 2026-05-02 23:51:16,273 | INFO     | cat /etc/os-release:
[2026-05-03 01:52:06] NAME="CentOS Linux"
[2026-05-03 01:52:06] VERSION="7 (Core)"
[2026-05-03 01:52:06] ID="centos"
[2026-05-03 01:52:06] ID_LIKE="rhel fedora"
[2026-05-03 01:52:06] VERSION_ID="7"
[2026-05-03 01:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 01:52:06] ANSI_COLOR="0;31"
[2026-05-03 01:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 01:52:06] HOME_URL="https://www.centos.org/"
[2026-05-03 01:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 01:52:06] 
[2026-05-03 01:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 01:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 01:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 01:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 01:52:06] 
[2026-05-03 01:52:06] 2026-05-02 23:51:16,274 | INFO     | ***************************************
[2026-05-03 01:52:06] 2026-05-02 23:51:16,776 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-05-03 01:52:06] 2026-05-02 23:51:16,795 | INFO     | sufficient remaining disk space (42578477056 B)
[2026-05-03 01:52:06] 2026-05-02 23:51:16,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 01:52:06] 2026-05-02 23:51:16,796 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 01:52:06] 2026-05-02 23:51:16,796 | INFO     | update_server=False
[2026-05-03 01:52:06] 2026-05-02 23:51:16,796 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 01:52:06] 2026-05-02 23:51:16,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 01:52:06] 2026-05-02 23:51:16,796 | INFO     | aborting loop
[2026-05-03 01:52:06] 2026-05-02 23:51:16,804 | INFO     | all payload control threads have been joined
[2026-05-03 01:52:06] 2026-05-02 23:51:17,093 | INFO     | all job control threads have been joined
[2026-05-03 01:52:06] 2026-05-02 23:51:17,497 | INFO     | all data control threads have been joined
[2026-05-03 01:52:06] 2026-05-02 23:51:17,801 | INFO     | [job] retrieve thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:17,802 | INFO     | [job] job monitor thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:17,810 | INFO     | [payload] control thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:18,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 01:52:06] 2026-05-02 23:51:18,098 | INFO     | [job] control thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:18,455 | INFO     | [job] validate thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:18,503 | INFO     | [data] control thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:18,513 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:18,700 | INFO     | [payload] validate_post thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:19,157 | INFO     | [data] copytool_in thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:19,166 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:19,219 | INFO     | [payload] failed_post thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:19,249 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:19,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 01:52:06] 2026-05-02 23:51:19,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 01:52:06] 2026-05-02 23:51:20,060 | INFO     | [data] copytool_out thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:20,751 | INFO     | [job] queue monitor thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:23,297 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:27,683 | INFO     | job.realtimelogging is not enabled
[2026-05-03 01:52:06] 2026-05-02 23:51:28,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 01:52:06] 2026-05-02 23:51:35,043 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-05-03 01:52:06] 2026-05-02 23:51:44,878 | INFO     | 11680s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-05-03 01:52:06] 2026-05-02 23:51:46,357 | INFO     | PID=3684372 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 01:52:06] 2026-05-02 23:51:46,357 | INFO     | .. there are 12 such processes running
[2026-05-03 01:52:06] 2026-05-02 23:51:46,359 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 01:52:06] 2026-05-02 23:51:46,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 01:52:06] 2026-05-02 23:51:46,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 01:52:06] 2026-05-02 23:52:00,045 | INFO     | [monitor] cgroup control has ended
[2026-05-03 01:52:06] 2026-05-02 23:52:01,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22358849189696)>', '<ExcThread(monitor, started 22358615410432)>']
[2026-05-03 01:52:06] 2026-05-02 23:52:01,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 01:52:06] 2026-05-02 23:52:01,423 | INFO     | [monitor] control thread has ended
[2026-05-03 01:52:06] 2026-05-02 23:52:06,043 | INFO     | all workflow threads have been joined
[2026-05-03 01:52:06] 2026-05-02 23:52:06,043 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 01:52:06] 2026-05-02 23:52:06,044 | INFO     | traces error code: 0
[2026-05-03 01:52:06] 2026-05-02 23:52:06,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 01:52:06] 2026-05-02 23:52:06,189 [wrapper] ==== pilot stdout END ====
[2026-05-03 01:52:06] 2026-05-02 23:52:06,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 01:52:06] 2026-05-02 23:52:06,195 [wrapper] pilotpid: 3684372
[2026-05-03 01:52:06] 2026-05-02 23:52:06,198 [wrapper] Pilot exit status: 0
[2026-05-03 01:52:06] 2026-05-02 23:52:06,209 [wrapper] pandaids: 7120580964
[2026-05-03 01:52:06] 2026-05-02 23:52:06,292 [wrapper] cleanup supervisor_pilot 3925846 3684373
[2026-05-03 01:52:06] 2026-05-02 23:52:06,295 [wrapper] Test setup, not cleaning
[2026-05-03 01:52:06] 2026-05-02 23:52:06,298 [wrapper] apfmon messages muted
[2026-05-03 01:52:06] 2026-05-02 23:52:06,302 [wrapper] ==== wrapper stdout END ====
[2026-05-03 01:52:06] 2026-05-02 23:52:06,305 [wrapper] ==== wrapper stderr END ====
[2026-05-03 01:52:06]  *** Error codes and diagnostics ***
[2026-05-03 01:52:06]     "exeErrorCode": 0,
[2026-05-03 01:52:06]     "pilotErrorCode": 0,
[2026-05-03 01:52:06]  *** Listing of results directory ***
[2026-05-03 01:52:06] total 622732
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc    683926 May  1 17:14 pilot3.tar.gz
[2026-05-03 01:52:06] -rwx------. 1 boinc boinc     36322 May  1 17:17 runpilot2-wrapper.sh
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc      5631 May  1 17:18 queuedata.json
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc       100 May  2 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 01:52:06] -rwxr-xr-x. 1 boinc boinc      7986 May  2 22:36 run_atlas
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc       105 May  2 22:36 job.xml
[2026-05-03 01:52:06] -rw-r--r--. 2 boinc boinc 445304309 May  2 22:36 EVNT.46373187._000198.pool.root.1
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc      6483 May  2 22:36 init_data.xml
[2026-05-03 01:52:06] -rw-r--r--. 2 boinc boinc     15667 May  2 22:36 start_atlas.sh
[2026-05-03 01:52:06] drwxrwx--x. 2 boinc boinc      4096 May  2 22:36 shared
[2026-05-03 01:52:06] -rw-r--r--. 2 boinc boinc    697430 May  2 22:36 input.tar.gz
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc         0 May  2 22:36 boinc_lockfile
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc      2596 May  2 22:36 pandaJob.out
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc   1002983 May  2 22:36 agis_schedconf.cvmfs.json
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc       448 May  2 22:36 workernode_map.json
[2026-05-03 01:52:06] drwx------. 5 boinc boinc      4096 May  2 22:36 pilot3
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc 185383195 May  3 01:50 HITS.49718416._021046.pool.root.1
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc       488 May  3 01:50 boinc_task_state.xml
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc      1033 May  3 01:51 memory_monitor_summary.json
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc   1508687 May  3 01:51 agis_ddmendpoints.agis.ALL.json
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc    333990 May  3 01:51 log.49718416._021046.job.log.tgz.1
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc      6425 May  3 01:51 heartbeat_new.json
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc      6316 May  3 01:51 heartbeat.json
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc      8192 May  3 01:51 boinc_mmap_file
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc        27 May  3 01:51 wrapper_checkpoint.txt
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc        95 May  3 01:51 pilot_heartbeat.json
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc      5020 May  3 01:52 pilotlog.txt
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc   1092250 May  3 01:52 log.49718416._021046.job.log.1
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc       357 May  3 01:52 output.list
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc       410 May  3 01:52 runtime_log
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc   1443840 May  3 01:52 result.tar.gz
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc      8828 May  3 01:52 runtime_log.err
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc       665 May  3 01:52 c3f9a45c34d0.diag
[2026-05-03 01:52:06] -rw-r--r--. 1 boinc boinc     21049 May  3 01:52 stderr.txt
[2026-05-03 01:52:06] HITS file was successfully produced:
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc 185383195 May  3 01:50 shared/HITS.pool.root.1
[2026-05-03 01:52:06]  *** Contents of shared directory: ***
[2026-05-03 01:52:06] total 618028
[2026-05-03 01:52:06] -rw-r--r--. 2 boinc boinc 445304309 May  2 22:36 ATLAS.root_0
[2026-05-03 01:52:06] -rw-r--r--. 2 boinc boinc     15667 May  2 22:36 start_atlas.sh
[2026-05-03 01:52:06] -rw-r--r--. 2 boinc boinc    697430 May  2 22:36 input.tar.gz
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc 185383195 May  3 01:50 HITS.pool.root.1
[2026-05-03 01:52:06] -rw-------. 1 boinc boinc   1443840 May  3 01:52 result.tar.gz
01:52:07 (3680343): run_atlas exited; CPU time 44302.451120
01:52:07 (3680343): called boinc_finish(0)

</stderr_txt>
]]>

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