Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:59 (2428344): wrapper (7.7.26015): starting
22:23:59 (2428344): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 22:23:59] Arguments: --nthreads 4
[2026-05-04 22:23:59] Threads: 4
[2026-05-04 22:23:59] Checking for CVMFS
[2026-05-04 22:23:59] No cvmfs_config command found, will try listing directly
[2026-05-04 22:23:59] CVMFS is ok
[2026-05-04 22:23:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 22:23:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 22:23:59] Further information can be found at the LHC@home message board.
[2026-05-04 22:23:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 22:23:59] Checking for apptainer binary...
[2026-05-04 22:23:59] which: no apptainer in ((null))
[2026-05-04 22:23:59] apptainer is not installed, using version from CVMFS
[2026-05-04 22:23:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 22:24:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-05-04 22:24:00] apptainer works
[2026-05-04 22:24:00] Set ATHENA_PROC_NUMBER=4
[2026-05-04 22:24:00] Set ATHENA_CORE_NUMBER=4
[2026-05-04 22:24:00] Starting ATLAS job with PandaID=7120581024
[2026-05-04 22:24:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 01:32:51]  *** The last 200 lines of the pilot log: ***
[2026-05-05 01:32:51] 2026-05-04 23:31:46,142 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-05 01:32:51] 2026-05-04 23:31:46,510 | INFO     | number of running child processes to parent process 2455812: 1
[2026-05-05 01:32:51] 2026-05-04 23:31:46,510 | INFO     | maximum number of monitored processes: 6
[2026-05-05 01:32:51] 2026-05-04 23:31:48,170 | INFO     | job 7120581024 has state=finished
[2026-05-05 01:32:51] 2026-05-04 23:31:48,170 | INFO     | preparing for final server update for job 7120581024 in state='finished'
[2026-05-05 01:32:51] 2026-05-04 23:31:48,171 | INFO     | reading metadata from: /var/lib/boinc/var/slot104/slots/0/PanDA_Pilot-7120581024/jobReport.json
[2026-05-05 01:32:51] 2026-05-04 23:31:48,173 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot104/slots/0/workernode_map.json
[2026-05-05 01:32:51] 2026-05-04 23:31:48,174 | INFO     | this job has now completed (state=finished)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,174 | INFO     | log transfer has been attempted: DONE
[2026-05-05 01:32:51] 2026-05-04 23:31:48,174 | INFO     | job 7120581024 has finished - writing final server update
[2026-05-05 01:32:51] 2026-05-04 23:31:48,174 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4033058/.job.ad'
[2026-05-05 01:32:51] 2026-05-04 23:31:48,175 | INFO     | total number of processed events: 400 (read)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,205 | INFO     | using path: /var/lib/boinc/var/slot104/slots/0/PanDA_Pilot-7120581024/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,205 | INFO     | extracted standard info from prmon json
[2026-05-05 01:32:51] 2026-05-04 23:31:48,205 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 01:32:51] 2026-05-04 23:31:48,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 01:32:51] 2026-05-04 23:31:48,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 01:32:51] 2026-05-04 23:31:48,217 | INFO     | fitting pss+swap vs Time
[2026-05-05 01:32:51] 2026-05-04 23:31:48,218 | INFO     | sum of square deviations: 1931608310.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,219 | INFO     | sum of deviations: 18574368240.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,219 | INFO     | mean x (centered): 0.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,219 | INFO     | mean y: 2316084.836956522
[2026-05-05 01:32:51] 2026-05-04 23:31:48,219 | INFO     | intersect: 2316084.836956522
[2026-05-05 01:32:51] 2026-05-04 23:31:48,220 | INFO     | chi2: 1.402301579908916
[2026-05-05 01:32:51] 2026-05-04 23:31:48,220 | INFO     | sum of square deviations: 1778377530.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,222 | INFO     | sum of deviations: 17424792068.999996
[2026-05-05 01:32:51] 2026-05-04 23:31:48,222 | INFO     | mean x (centered): 0.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,222 | INFO     | mean y: 2314953.150837989
[2026-05-05 01:32:51] 2026-05-04 23:31:48,222 | INFO     | intersect: 2314953.150837989
[2026-05-05 01:32:51] 2026-05-04 23:31:48,222 | INFO     | chi2: 1.4013851824884227
[2026-05-05 01:32:51] 2026-05-04 23:31:48,223 | INFO     | current chi2=1.4013851824884227 (change=0.06534952492550447 %)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,223 | INFO     | right removable region: 178
[2026-05-05 01:32:51] 2026-05-04 23:31:48,223 | INFO     | sum of square deviations: 1778377530.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,224 | INFO     | sum of deviations: -6033202011.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,224 | INFO     | mean x (centered): 0.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,224 | INFO     | mean y: 2340246.5027932962
[2026-05-05 01:32:51] 2026-05-04 23:31:48,224 | INFO     | intersect: 2340246.5027932962
[2026-05-05 01:32:51] 2026-05-04 23:31:48,225 | INFO     | chi2: 0.011272332881296022
[2026-05-05 01:32:51] 2026-05-04 23:31:48,225 | INFO     | current chi2=0.011272332881296022 (change=99.19615487547064 %)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,225 | INFO     | sum of square deviations: 1633472487.5
[2026-05-05 01:32:51] 2026-05-04 23:31:48,226 | INFO     | sum of deviations: -5040302509.999999
[2026-05-05 01:32:51] 2026-05-04 23:31:48,226 | INFO     | mean x (centered): 0.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,227 | INFO     | mean y: 2339196.356321839
[2026-05-05 01:32:51] 2026-05-04 23:31:48,227 | INFO     | intersect: 2339196.356321839
[2026-05-05 01:32:51] 2026-05-04 23:31:48,227 | INFO     | chi2: 0.010810732740782127
[2026-05-05 01:32:51] 2026-05-04 23:31:48,227 | INFO     | current chi2=0.010810732740782127 (change=4.094983224633296 %)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,227 | INFO     | left removable region: 10
[2026-05-05 01:32:51] 2026-05-04 23:31:48,227 | INFO     | sum of square deviations: 1470248962.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,229 | INFO     | sum of deviations: -5500240405.500001
[2026-05-05 01:32:51] 2026-05-04 23:31:48,229 | INFO     | mean x (centered): 0.0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,229 | INFO     | mean y: 2338698.3273809524
[2026-05-05 01:32:51] 2026-05-04 23:31:48,229 | INFO     | intersect: 2338698.3273809524
[2026-05-05 01:32:51] 2026-05-04 23:31:48,232 | INFO     | chi2: 0.007977630415284062
[2026-05-05 01:32:51] 2026-05-04 23:31:48,232 | INFO     | current memory leak: -3.74 B/s (using 168 data points, chi2=0.01)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | could have reported an average CPU frequency of 2677 MHz (10 samples)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | ..............................
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . Timing measurements:
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . get job = 0 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . initial setup = 9 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . payload setup = 17 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . stage-in = 0 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . payload execution = 11203 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,233 | INFO     | . stage-out = 1 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,234 | INFO     | . log creation = 0 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,234 | INFO     | ..............................
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | 
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | job summary report
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | --------------------------------------------------
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | PanDA job id: 7120581024
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | task id: 49718416
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | errors: (none)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | pilot state: finished 
[2026-05-05 01:32:51] 2026-05-04 23:31:48,351 | INFO     | transexitcode: 0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | exeerrorcode: 0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | exeerrordiag: 
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | exitcode: 0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | exitmsg: OK
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | cpuconsumptiontime: 39269 s
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | nevents: 400
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | neventsw: 0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | pid: 2455812
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | pgrp: 2455812
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | corecount: 4
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | event service: False
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | sizes: {0: 2270363, 1: 2272248, 12: 2272248, 11225: 2301828, 11227: 2310906, 11229: 2311044}
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | --------------------------------------------------
[2026-05-05 01:32:51] 2026-05-04 23:31:48,352 | INFO     | 
[2026-05-05 01:32:51] 2026-05-04 23:31:48,353 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/0
[2026-05-05 01:32:51] 2026-05-04 23:31:48,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,386 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,386 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,386 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,388 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 01:32:51] 2026-05-04 23:31:48,388 | INFO     | job 7120581024 has completed (purged errors)
[2026-05-05 01:32:51] 2026-05-04 23:31:48,388 | INFO     | overall cleanup function is called
[2026-05-05 01:32:51] 2026-05-04 23:31:49,398 | INFO     | --- collectZombieJob: --- 10, [2455812]
[2026-05-05 01:32:51] 2026-05-04 23:31:49,398 | INFO     | zombie collector waiting for pid 2455812
[2026-05-05 01:32:51] 2026-05-04 23:31:49,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 01:32:51] 2026-05-04 23:31:49,398 | INFO     | collected zombie processes
[2026-05-05 01:32:51] 2026-05-04 23:31:49,398 | INFO     | will attempt to kill all subprocesses of pid=2455812
[2026-05-05 01:32:51] 2026-05-04 23:31:50,192 | INFO     | process IDs to be killed: [2455812] (in reverse order)
[2026-05-05 01:32:51] 2026-05-04 23:31:50,975 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 01:32:51] 2026-05-04 23:31:50,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 01:32:51] 2026-05-04 23:31:51,019 | INFO     | did not find any defunct processes belonging to 2455812
[2026-05-05 01:32:51] 2026-05-04 23:31:51,062 | INFO     | did not find any defunct processes belonging to 2455812
[2026-05-05 01:32:51] 2026-05-04 23:31:51,062 | INFO     | Ready for new job
[2026-05-05 01:32:51] 2026-05-04 23:31:51,064 | INFO     | ***************************************
[2026-05-05 01:32:51] 2026-05-04 23:31:51,065 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 01:32:51] 2026-05-04 23:31:51,065 | INFO     | ***************************************
[2026-05-05 01:32:51] 2026-05-04 23:31:51,065 | INFO     | 
[2026-05-05 01:32:51] 2026-05-04 23:31:51,077 | INFO     | architecture information:
[2026-05-05 01:32:51] 2026-05-04 23:31:51,083 | INFO     | executing command: cat /etc/os-release
[2026-05-05 01:32:51] 2026-05-04 23:31:51,125 | INFO     | cat /etc/os-release:
[2026-05-05 01:32:51] NAME="CentOS Linux"
[2026-05-05 01:32:51] VERSION="7 (Core)"
[2026-05-05 01:32:51] ID="centos"
[2026-05-05 01:32:51] ID_LIKE="rhel fedora"
[2026-05-05 01:32:51] VERSION_ID="7"
[2026-05-05 01:32:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 01:32:51] ANSI_COLOR="0;31"
[2026-05-05 01:32:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 01:32:51] HOME_URL="https://www.centos.org/"
[2026-05-05 01:32:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 01:32:51] 
[2026-05-05 01:32:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 01:32:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 01:32:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 01:32:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 01:32:51] 
[2026-05-05 01:32:51] 2026-05-04 23:31:51,125 | INFO     | ***************************************
[2026-05-05 01:32:51] 2026-05-04 23:31:51,628 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/0
[2026-05-05 01:32:51] 2026-05-04 23:31:51,658 | INFO     | sufficient remaining disk space (256020316160 B)
[2026-05-05 01:32:51] 2026-05-04 23:31:51,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 01:32:51] 2026-05-04 23:31:51,659 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 01:32:51] 2026-05-04 23:31:51,659 | INFO     | update_server=False
[2026-05-05 01:32:51] 2026-05-04 23:31:51,659 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 01:32:51] 2026-05-04 23:31:51,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 01:32:51] 2026-05-04 23:31:52,222 | INFO     | all payload control threads have been joined
[2026-05-05 01:32:51] 2026-05-04 23:31:52,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 01:32:51] 2026-05-04 23:31:52,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:32:51] 2026-05-04 23:31:52,530 | INFO     | aborting loop
[2026-05-05 01:32:51] 2026-05-04 23:31:52,614 | INFO     | all data control threads have been joined
[2026-05-05 01:32:51] 2026-05-04 23:31:52,665 | INFO     | [job] retrieve thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:52,810 | INFO     | [payload] validate_post thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:52,831 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:52,904 | INFO     | [job] validate thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,028 | INFO     | all job control threads have been joined
[2026-05-05 01:32:51] 2026-05-04 23:31:53,230 | INFO     | [payload] control thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:32:51] 2026-05-04 23:31:53,412 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,465 | INFO     | [payload] failed_post thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,484 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,492 | INFO     | [data] copytool_in thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,535 | INFO     | [job] job monitor thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,619 | INFO     | [data] control thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,647 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:53,665 | INFO     | [data] copytool_out thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:54,033 | INFO     | [job] control thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:54,365 | INFO     | [job] queue monitor thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:31:56,297 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 01:32:51] 2026-05-04 23:32:21,648 | INFO     | PID=2440633 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 01:32:51] 2026-05-04 23:32:21,649 | INFO     | .. there are 26 such processes running
[2026-05-05 01:32:51] 2026-05-04 23:32:21,649 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 01:32:51] 2026-05-04 23:32:21,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 01:32:51] 2026-05-04 23:32:21,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 01:32:51] 2026-05-04 23:32:45,774 | INFO     | [monitor] cgroup control has ended
[2026-05-05 01:32:51] 2026-05-04 23:32:45,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23114787567424)>', '<ExcThread(monitor, started 23114486355712)>']
[2026-05-05 01:32:51] 2026-05-04 23:32:46,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 01:32:51] 2026-05-04 23:32:46,775 | INFO     | [monitor] control thread has ended
[2026-05-05 01:32:51] 2026-05-04 23:32:50,885 | INFO     | all workflow threads have been joined
[2026-05-05 01:32:51] 2026-05-04 23:32:50,885 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 01:32:51] 2026-05-04 23:32:50,886 | INFO     | traces error code: 0
[2026-05-05 01:32:51] 2026-05-04 23:32:50,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 01:32:51] 2026-05-04 23:32:51,309 [wrapper] ==== pilot stdout END ====
[2026-05-05 01:32:51] 2026-05-04 23:32:51,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 01:32:51] 2026-05-04 23:32:51,346 [wrapper] pilotpid: 2440633
[2026-05-05 01:32:51] 2026-05-04 23:32:51,351 [wrapper] Pilot exit status: 0
[2026-05-05 01:32:51] 2026-05-04 23:32:51,437 [wrapper] pandaids: 7120581024
[2026-05-05 01:32:51] 2026-05-04 23:32:51,670 [wrapper] cleanup supervisor_pilot 2919760 2440634
[2026-05-05 01:32:51] 2026-05-04 23:32:51,678 [wrapper] Test setup, not cleaning
[2026-05-05 01:32:51] 2026-05-04 23:32:51,681 [wrapper] apfmon messages muted
[2026-05-05 01:32:51] 2026-05-04 23:32:51,685 [wrapper] ==== wrapper stdout END ====
[2026-05-05 01:32:51] 2026-05-04 23:32:51,688 [wrapper] ==== wrapper stderr END ====
[2026-05-05 01:32:51]  *** Error codes and diagnostics ***
[2026-05-05 01:32:51]     "exeErrorCode": 0,
[2026-05-05 01:32:51]     "pilotErrorCode": 0,
[2026-05-05 01:32:51]  *** Listing of results directory ***
[2026-05-05 01:32:51] total 628676
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc    683926 May  1 17:14 pilot3.tar.gz
[2026-05-05 01:32:51] -rwx------. 1 boinc boinc     36322 May  1 17:17 runpilot2-wrapper.sh
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc      5631 May  1 17:18 queuedata.json
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc       100 May  4 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 01:32:51] -rwxr-xr-x. 1 boinc boinc      7986 May  4 22:23 run_atlas
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc       105 May  4 22:23 job.xml
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc      6542 May  4 22:23 init_data.xml
[2026-05-05 01:32:51] -rw-r--r--. 2 boinc boinc 440906560 May  4 22:23 EVNT.46373187._000199.pool.root.1
[2026-05-05 01:32:51] -rw-r--r--. 2 boinc boinc     15667 May  4 22:23 start_atlas.sh
[2026-05-05 01:32:51] drwxrwx--x. 2 boinc boinc      4096 May  4 22:23 shared
[2026-05-05 01:32:51] -rw-r--r--. 2 boinc boinc    697432 May  4 22:23 input.tar.gz
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc         0 May  4 22:23 boinc_lockfile
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc      2596 May  4 22:24 pandaJob.out
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc   1002597 May  4 22:24 agis_schedconf.cvmfs.json
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc       444 May  4 22:24 workernode_map.json
[2026-05-05 01:32:51] drwx------. 5 boinc boinc      4096 May  4 22:24 pilot3
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc 196015168 May  5 01:31 HITS.49718416._021106.pool.root.1
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc       488 May  5 01:31 boinc_task_state.xml
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc      1026 May  5 01:31 memory_monitor_summary.json
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc        95 May  5 01:31 pilot_heartbeat.json
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc   1505918 May  5 01:31 agis_ddmendpoints.agis.ALL.json
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc    337355 May  5 01:31 log.49718416._021106.job.log.tgz.1
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc      6391 May  5 01:31 heartbeat_new.json
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc      6282 May  5 01:31 heartbeat.json
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc        27 May  5 01:32 wrapper_checkpoint.txt
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc      8192 May  5 01:32 boinc_mmap_file
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc      4835 May  5 01:32 pilotlog.txt
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc   1013966 May  5 01:32 log.49718416._021106.job.log.1
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc       357 May  5 01:32 output.list
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc       410 May  5 01:32 runtime_log
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc   1372160 May  5 01:32 result.tar.gz
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc      8845 May  5 01:32 runtime_log.err
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc       665 May  5 01:32 c3fca1e26bcf.diag
[2026-05-05 01:32:51] -rw-r--r--. 1 boinc boinc     21063 May  5 01:32 stderr.txt
[2026-05-05 01:32:51] HITS file was successfully produced:
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc 196015168 May  5 01:31 shared/HITS.pool.root.1
[2026-05-05 01:32:51]  *** Contents of shared directory: ***
[2026-05-05 01:32:51] total 624048
[2026-05-05 01:32:51] -rw-r--r--. 2 boinc boinc 440906560 May  4 22:23 ATLAS.root_0
[2026-05-05 01:32:51] -rw-r--r--. 2 boinc boinc     15667 May  4 22:23 start_atlas.sh
[2026-05-05 01:32:51] -rw-r--r--. 2 boinc boinc    697432 May  4 22:23 input.tar.gz
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc 196015168 May  5 01:31 HITS.pool.root.1
[2026-05-05 01:32:51] -rw-------. 1 boinc boinc   1372160 May  5 01:32 result.tar.gz
01:32:53 (2428344): run_atlas exited; CPU time 39958.343337
01:32:53 (2428344): called boinc_finish(0)

</stderr_txt>
]]>

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