Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:20:15 (17784): wrapper (7.7.26015): starting
03:20:15 (17784): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 03:20:15] Arguments: --nthreads 8
[2026-05-02 03:20:15] Threads: 8
[2026-05-02 03:20:15] Checking for CVMFS
[2026-05-02 03:20:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 03:20:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 03:20:15] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 03:20:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 03:20:15] 2.11.2.0 19079 23551 100808 159114 1 118 20096295 25165824 704 130560 0 9859409 99.904 3975458 5375 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 03:20:15] CVMFS is ok
[2026-05-02 03:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 03:20:15] Checking for apptainer binary...
[2026-05-02 03:20:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 03:20:15] Running /usr/bin/apptainer --version
[2026-05-02 03:20:15] apptainer version 1.3.2-1.el7
[2026-05-02 03:20:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 03:20:17] cg-vwn478.simple-grid.lan
[2026-05-02 03:20:17] apptainer works
[2026-05-02 03:20:17] Set ATHENA_PROC_NUMBER=8
[2026-05-02 03:20:17] Set ATHENA_CORE_NUMBER=8
[2026-05-02 03:20:17] Starting ATLAS job with PandaID=7120580661
[2026-05-02 03:20:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 07:19:17]  *** The last 200 lines of the pilot log: ***
[2026-05-02 07:19:17] 2026-05-02 05:18:10,862 | INFO     | this job has now completed (state=finished)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,862 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,862 | INFO     | log transfer has been attempted: DONE
[2026-05-02 07:19:17] 2026-05-02 05:18:10,862 | INFO     | job 7120580661 has finished - writing final server update
[2026-05-02 07:19:17] 2026-05-02 05:18:10,863 | INFO     | total number of processed events: 400 (read)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,865 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7120580661/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,865 | INFO     | extracted standard info from prmon json
[2026-05-02 07:19:17] 2026-05-02 05:18:10,865 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 07:19:17] 2026-05-02 05:18:10,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 07:19:17] 2026-05-02 05:18:10,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 07:19:17] 2026-05-02 05:18:10,870 | INFO     | fitting pss+swap vs Time
[2026-05-02 07:19:17] 2026-05-02 05:18:10,871 | INFO     | sum of square deviations: 3822136780.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,873 | INFO     | sum of deviations: 98035800348.00006
[2026-05-02 07:19:17] 2026-05-02 05:18:10,873 | INFO     | mean x (centered): 0.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,873 | INFO     | mean y: 2433959.3896103897
[2026-05-02 07:19:17] 2026-05-02 05:18:10,873 | INFO     | intersect: 2433959.3896103897
[2026-05-02 07:19:17] 2026-05-02 05:18:10,874 | INFO     | chi2: 9.131742256948517
[2026-05-02 07:19:17] 2026-05-02 05:18:10,874 | INFO     | sum of square deviations: 3579276412.5
[2026-05-02 07:19:17] 2026-05-02 05:18:10,876 | INFO     | sum of deviations: 111167977032.99995
[2026-05-02 07:19:17] 2026-05-02 05:18:10,876 | INFO     | mean x (centered): 0.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,877 | INFO     | mean y: 2442036.389380531
[2026-05-02 07:19:17] 2026-05-02 05:18:10,877 | INFO     | intersect: 2442036.389380531
[2026-05-02 07:19:17] 2026-05-02 05:18:10,877 | INFO     | chi2: 8.455383082587723
[2026-05-02 07:19:17] 2026-05-02 05:18:10,877 | INFO     | current chi2=8.455383082587723 (change=7.406682704454775 %)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,878 | INFO     | right removable region: 225
[2026-05-02 07:19:17] 2026-05-02 05:18:10,878 | INFO     | sum of square deviations: 3579276412.5
[2026-05-02 07:19:17] 2026-05-02 05:18:10,880 | INFO     | sum of deviations: 15133856945.500004
[2026-05-02 07:19:17] 2026-05-02 05:18:10,880 | INFO     | mean x (centered): 0.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,880 | INFO     | mean y: 2485996.721238938
[2026-05-02 07:19:17] 2026-05-02 05:18:10,880 | INFO     | intersect: 2485996.721238938
[2026-05-02 07:19:17] 2026-05-02 05:18:10,881 | INFO     | chi2: 3.6767466170530896
[2026-05-02 07:19:17] 2026-05-02 05:18:10,881 | INFO     | current chi2=3.6767466170530896 (change=59.73663608107881 %)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,881 | INFO     | sum of square deviations: 3346927870.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,883 | INFO     | sum of deviations: -43955162108.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,883 | INFO     | mean x (centered): 0.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,884 | INFO     | mean y: 2524696.185520362
[2026-05-02 07:19:17] 2026-05-02 05:18:10,884 | INFO     | intersect: 2524696.185520362
[2026-05-02 07:19:17] 2026-05-02 05:18:10,884 | INFO     | chi2: 1.045243673685238
[2026-05-02 07:19:17] 2026-05-02 05:18:10,884 | INFO     | current chi2=1.045243673685238 (change=71.57150648246193 %)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,885 | INFO     | sum of square deviations: 3124858590.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,886 | INFO     | sum of deviations: -51860844214.00001
[2026-05-02 07:19:17] 2026-05-02 05:18:10,887 | INFO     | mean x (centered): 0.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,887 | INFO     | mean y: 2530080.3518518517
[2026-05-02 07:19:17] 2026-05-02 05:18:10,887 | INFO     | intersect: 2530080.3518518517
[2026-05-02 07:19:17] 2026-05-02 05:18:10,887 | INFO     | chi2: 0.9483844618822708
[2026-05-02 07:19:17] 2026-05-02 05:18:10,888 | INFO     | current chi2=0.9483844618822708 (change=9.266663290242034 %)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,888 | INFO     | left removable region: 15
[2026-05-02 07:19:17] 2026-05-02 05:18:10,888 | INFO     | sum of square deviations: 2871616632.5
[2026-05-02 07:19:17] 2026-05-02 05:18:10,890 | INFO     | sum of deviations: -36225503005.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,890 | INFO     | mean x (centered): 0.0
[2026-05-02 07:19:17] 2026-05-02 05:18:10,890 | INFO     | mean y: 2541136.6095238095
[2026-05-02 07:19:17] 2026-05-02 05:18:10,890 | INFO     | intersect: 2541136.6095238095
[2026-05-02 07:19:17] 2026-05-02 05:18:10,891 | INFO     | chi2: 0.15818350971300055
[2026-05-02 07:19:17] 2026-05-02 05:18:10,891 | INFO     | current memory leak: -12.62 B/s (using 210 data points, chi2=0.16)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,891 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | ..............................
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | . Timing measurements:
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | . get job = 0 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | . initial setup = 7 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | . payload setup = 47 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | . stage-in = 0 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,892 | INFO     | . payload execution = 14177 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,893 | INFO     | . stage-out = 2 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,893 | INFO     | . log creation = 0 s
[2026-05-02 07:19:17] 2026-05-02 05:18:10,893 | INFO     | ..............................
[2026-05-02 07:19:17] 2026-05-02 05:18:11,004 | INFO     | 
[2026-05-02 07:19:17] 2026-05-02 05:18:11,004 | INFO     | job summary report
[2026-05-02 07:19:17] 2026-05-02 05:18:11,004 | INFO     | --------------------------------------------------
[2026-05-02 07:19:17] 2026-05-02 05:18:11,004 | INFO     | PanDA job id: 7120580661
[2026-05-02 07:19:17] 2026-05-02 05:18:11,004 | INFO     | task id: 49718416
[2026-05-02 07:19:17] 2026-05-02 05:18:11,004 | INFO     | errors: (none)
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | pilot state: finished 
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | transexitcode: 0
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | exeerrorcode: 0
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | exeerrordiag: 
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | exitcode: 0
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | exitmsg: OK
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | cpuconsumptiontime: 51089 s
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | nevents: 400
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | neventsw: 0
[2026-05-02 07:19:17] 2026-05-02 05:18:11,005 | INFO     | pid: 26144
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | pgrp: 26144
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | corecount: 8
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | event service: False
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | sizes: {0: 2275555, 1: 2277157, 11: 2277157, 14229: 2307917, 14233: 2316915, 14236: 2316971, 14238: 2317293}
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | --------------------------------------------------
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | 
[2026-05-02 07:19:17] 2026-05-02 05:18:11,006 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-05-02 07:19:17] 2026-05-02 05:18:11,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,358 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,358 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 07:19:17] 2026-05-02 05:18:11,360 | INFO     | job 7120580661 has completed (purged errors)
[2026-05-02 07:19:17] 2026-05-02 05:18:11,361 | INFO     | overall cleanup function is called
[2026-05-02 07:19:17] 2026-05-02 05:18:12,369 | INFO     | --- collectZombieJob: --- 10, [26144]
[2026-05-02 07:19:17] 2026-05-02 05:18:12,370 | INFO     | zombie collector waiting for pid 26144
[2026-05-02 07:19:17] 2026-05-02 05:18:12,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 07:19:17] 2026-05-02 05:18:12,370 | INFO     | collected zombie processes
[2026-05-02 07:19:17] 2026-05-02 05:18:12,370 | INFO     | will attempt to kill all subprocesses of pid=26144
[2026-05-02 07:19:17] 2026-05-02 05:18:12,430 | INFO     | process IDs to be killed: [26144] (in reverse order)
[2026-05-02 07:19:17] 2026-05-02 05:18:13,442 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 07:19:17] 2026-05-02 05:18:13,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 07:19:17] 2026-05-02 05:18:13,444 | INFO     | did not find any defunct processes belonging to 26144
[2026-05-02 07:19:17] 2026-05-02 05:18:13,446 | INFO     | did not find any defunct processes belonging to 26144
[2026-05-02 07:19:17] 2026-05-02 05:18:13,446 | INFO     | Ready for new job
[2026-05-02 07:19:17] 2026-05-02 05:18:13,448 | INFO     | ***************************************
[2026-05-02 07:19:17] 2026-05-02 05:18:13,448 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 07:19:17] 2026-05-02 05:18:13,448 | INFO     | ***************************************
[2026-05-02 07:19:17] 2026-05-02 05:18:13,448 | INFO     | 
[2026-05-02 07:19:17] 2026-05-02 05:18:13,449 | INFO     | pilot is running in a VM
[2026-05-02 07:19:17] 2026-05-02 05:18:13,449 | INFO     | architecture information:
[2026-05-02 07:19:17] 2026-05-02 05:18:13,459 | INFO     | executing command: cat /etc/os-release
[2026-05-02 07:19:17] 2026-05-02 05:18:13,607 | INFO     | cat /etc/os-release:
[2026-05-02 07:19:17] NAME="CentOS Linux"
[2026-05-02 07:19:17] VERSION="7 (Core)"
[2026-05-02 07:19:17] ID="centos"
[2026-05-02 07:19:17] ID_LIKE="rhel fedora"
[2026-05-02 07:19:17] VERSION_ID="7"
[2026-05-02 07:19:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 07:19:17] ANSI_COLOR="0;31"
[2026-05-02 07:19:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 07:19:17] HOME_URL="https://www.centos.org/"
[2026-05-02 07:19:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 07:19:17] 
[2026-05-02 07:19:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 07:19:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 07:19:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 07:19:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 07:19:17] 
[2026-05-02 07:19:17] 2026-05-02 05:18:13,607 | INFO     | ***************************************
[2026-05-02 07:19:17] 2026-05-02 05:18:14,111 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-05-02 07:19:17] 2026-05-02 05:18:14,487 | INFO     | sufficient remaining disk space (495905144832 B)
[2026-05-02 07:19:17] 2026-05-02 05:18:14,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 07:19:17] 2026-05-02 05:18:14,488 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 07:19:17] 2026-05-02 05:18:14,488 | INFO     | update_server=False
[2026-05-02 07:19:17] 2026-05-02 05:18:14,488 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 07:19:17] 2026-05-02 05:18:14,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:19:17] 2026-05-02 05:18:14,489 | INFO     | aborting loop
[2026-05-02 07:19:17] 2026-05-02 05:18:14,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 07:19:17] 2026-05-02 05:18:14,779 | INFO     | all payload control threads have been joined
[2026-05-02 07:19:17] 2026-05-02 05:18:15,150 | INFO     | all data control threads have been joined
[2026-05-02 07:19:17] 2026-05-02 05:18:15,494 | INFO     | [job] job monitor thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:15,497 | INFO     | [job] retrieve thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:15,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:15,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 07:19:17] 2026-05-02 05:18:15,763 | INFO     | all job control threads have been joined
[2026-05-02 07:19:17] 2026-05-02 05:18:15,786 | INFO     | [payload] control thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:19:17] 2026-05-02 05:18:16,157 | INFO     | [data] control thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,231 | INFO     | [job] validate thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,241 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,557 | INFO     | [payload] failed_post thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,572 | INFO     | [payload] validate_post thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,596 | INFO     | [data] copytool_in thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,602 | INFO     | [data] copytool_out thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,665 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,770 | INFO     | [job] control thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:16,879 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:17,025 | INFO     | [job] queue monitor thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:19,607 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 07:19:17] 2026-05-02 05:18:43,439 | INFO     | PID=21698 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 07:19:17] 2026-05-02 05:18:43,439 | INFO     | .. there are 2 such processes running
[2026-05-02 07:19:17] 2026-05-02 05:18:43,440 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 07:19:17] 2026-05-02 05:18:43,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 07:19:17] 2026-05-02 05:18:43,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 07:19:17] 2026-05-02 05:19:06,326 | INFO     | [monitor] cgroup control has ended
[2026-05-02 07:19:17] 2026-05-02 05:19:07,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127701526336)>', '<ExcThread(monitor, started 140127175165696)>']
[2026-05-02 07:19:17] 2026-05-02 05:19:08,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 07:19:17] 2026-05-02 05:19:08,589 | INFO     | [monitor] control thread has ended
[2026-05-02 07:19:17] 2026-05-02 05:19:12,850 | INFO     | all workflow threads have been joined
[2026-05-02 07:19:17] 2026-05-02 05:19:12,851 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 07:19:17] 2026-05-02 05:19:12,851 | INFO     | traces error code: 0
[2026-05-02 07:19:17] 2026-05-02 05:19:12,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 07:19:17] 2026-05-02 05:19:13,249 [wrapper] ==== pilot stdout END ====
[2026-05-02 07:19:17] 2026-05-02 05:19:13,340 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 07:19:17] 2026-05-02 05:19:13,450 [wrapper] pilotpid: 21698
[2026-05-02 07:19:17] 2026-05-02 05:19:13,535 [wrapper] Pilot exit status: 0
[2026-05-02 07:19:17] 2026-05-02 05:19:14,025 [wrapper] pandaids: 7120580661
[2026-05-02 07:19:17] 2026-05-02 05:19:14,814 [wrapper] cleanup supervisor_pilot  1407 21699
[2026-05-02 07:19:17] 2026-05-02 05:19:14,819 [wrapper] Test setup, not cleaning
[2026-05-02 07:19:17] 2026-05-02 05:19:14,822 [wrapper] apfmon messages muted
[2026-05-02 07:19:17] 2026-05-02 05:19:14,824 [wrapper] ==== wrapper stdout END ====
[2026-05-02 07:19:17] 2026-05-02 05:19:14,827 [wrapper] ==== wrapper stderr END ====
[2026-05-02 07:19:17]  *** Error codes and diagnostics ***
[2026-05-02 07:19:17]     "exeErrorCode": 0,
[2026-05-02 07:19:17]     "pilotErrorCode": 0,
[2026-05-02 07:19:17]  *** Listing of results directory ***
[2026-05-02 07:19:17] total 632836
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc    683926 May  1 17:14 pilot3.tar.gz
[2026-05-02 07:19:17] -rwx------. 1 boinc boinc     36322 May  1 17:17 runpilot2-wrapper.sh
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc      5631 May  1 17:18 queuedata.json
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc       100 May  2 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 07:19:17] -rwxr-xr-x. 1 boinc boinc      7986 May  2 03:20 run_atlas
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc       105 May  2 03:20 job.xml
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc      6307 May  2 03:20 init_data.xml
[2026-05-02 07:19:17] -rw-r--r--. 2 boinc boinc 446406249 May  2 03:20 EVNT.46373187._000195.pool.root.1
[2026-05-02 07:19:17] -rw-r--r--. 2 boinc boinc     15667 May  2 03:20 start_atlas.sh
[2026-05-02 07:19:17] drwxrwx--x. 2 boinc boinc        68 May  2 03:20 shared
[2026-05-02 07:19:17] -rw-r--r--. 2 boinc boinc    697433 May  2 03:20 input.tar.gz
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc         0 May  2 03:20 boinc_lockfile
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc      2597 May  2 03:20 pandaJob.out
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc   1002984 May  2 03:20 agis_schedconf.cvmfs.json
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc       415 May  2 03:20 workernode_map.json
[2026-05-02 07:19:17] drwx------. 5 boinc boinc      4096 May  2 03:20 pilot3
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc 193990365 May  2 07:16 HITS.49718416._020903.pool.root.1
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc       489 May  2 07:17 boinc_task_state.xml
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc      1011 May  2 07:17 memory_monitor_summary.json
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc   1508687 May  2 07:18 agis_ddmendpoints.agis.ALL.json
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc    424317 May  2 07:18 log.49718416._020903.job.log.tgz.1
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc      6331 May  2 07:18 heartbeat_new.json
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc      6222 May  2 07:18 heartbeat.json
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc        95 May  2 07:18 pilot_heartbeat.json
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc      8192 May  2 07:18 boinc_mmap_file
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc        28 May  2 07:18 wrapper_checkpoint.txt
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc      4883 May  2 07:19 pilotlog.txt
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc   1328978 May  2 07:19 log.49718416._020903.job.log.1
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc       357 May  2 07:19 output.list
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc       410 May  2 07:19 runtime_log
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc   1771520 May  2 07:19 result.tar.gz
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc      8439 May  2 07:19 runtime_log.err
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc       655 May  2 07:19 c3ed78e57290.diag
[2026-05-02 07:19:17] -rw-r--r--. 1 boinc boinc     20626 May  2 07:19 stderr.txt
[2026-05-02 07:19:17] HITS file was successfully produced:
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc 193990365 May  2 07:16 shared/HITS.pool.root.1
[2026-05-02 07:19:17]  *** Contents of shared directory: ***
[2026-05-02 07:19:17] total 627820
[2026-05-02 07:19:17] -rw-r--r--. 2 boinc boinc 446406249 May  2 03:20 ATLAS.root_0
[2026-05-02 07:19:17] -rw-r--r--. 2 boinc boinc     15667 May  2 03:20 start_atlas.sh
[2026-05-02 07:19:17] -rw-r--r--. 2 boinc boinc    697433 May  2 03:20 input.tar.gz
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc 193990365 May  2 07:16 HITS.pool.root.1
[2026-05-02 07:19:17] -rw-------. 1 boinc boinc   1771520 May  2 07:19 result.tar.gz
07:19:18 (17784): run_atlas exited; CPU time 51215.863833
07:19:18 (17784): called boinc_finish(0)

</stderr_txt>
]]>

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