Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
17:49:41 (3340206): wrapper (7.7.26015): starting
17:49:41 (3340206): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 17:49:41] Arguments: --nthreads 4
[2026-05-01 17:49:41] Threads: 4
[2026-05-01 17:49:41] Checking for CVMFS
[2026-05-01 17:49:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 17:49:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 17:49:41] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 17:49:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 17:49:41] 2.13.3.0 10850 89214 102464 159102 0 1 2843228 4096001 0 130560 0 18024580 99.920 3760262 1531 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-01 17:49:41] CVMFS is ok
[2026-05-01 17:49:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 17:49:41] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-01 17:49:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-01 17:49:41] Further information can be found at the LHC@home message board.
[2026-05-01 17:49:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 17:49:41] Checking for apptainer binary...
[2026-05-01 17:49:41] apptainer is not installed, using version from CVMFS
[2026-05-01 17:49:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 17:49:42] aplysia.rechenkraft.net
[2026-05-01 17:49:42] apptainer works
[2026-05-01 17:49:42] Set ATHENA_PROC_NUMBER=4
[2026-05-01 17:49:42] Set ATHENA_CORE_NUMBER=4
[2026-05-01 17:49:42] Starting ATLAS job with PandaID=7120561441
[2026-05-01 17:49:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 20:47:03]  *** The last 200 lines of the pilot log: ***
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | intersect: 2366988.8155339807
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | chi2: 0.03375701786156608
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | current chi2=0.03375701786156608 (change=28.29126498835665 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | sum of square deviations: 291817564.5
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | sum of deviations: 503545941.4999999
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | mean y: 2357953.9285714286
[2026-05-01 20:47:03] 2026-05-01 19:45:08,009 | INFO     | intersect: 2357953.9285714286
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | chi2: 0.00752190920787118
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | current chi2=0.00752190920787118 (change=77.71749495551495 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | sum of square deviations: 249388862.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | sum of deviations: 781550300.0000001
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | mean y: 2357044.430107527
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | intersect: 2357044.430107527
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | chi2: 0.00044035183015456717
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | current chi2=0.00044035183015456717 (change=94.14574387984148 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,010 | INFO     | sum of square deviations: 211285822.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | sum of deviations: 497285755.5
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | mean y: 2358182.147727273
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | intersect: 2358182.147727273
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | chi2: 0.00028410729553706576
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | current chi2=0.00028410729553706576 (change=35.4817498005307 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | sum of square deviations: 177275882.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | sum of deviations: 283141625.99999994
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,011 | INFO     | mean y: 2359142.120481928
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | intersect: 2359142.120481928
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | chi2: 0.00017020908539339502
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | current chi2=0.00017020908539339502 (change=40.08985757594216 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | sum of square deviations: 147126479.5
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | sum of deviations: 139971423.50000003
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | mean y: 2359862.3974358975
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | intersect: 2359862.3974358975
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | chi2: 9.812060661946118e-05
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | current chi2=9.812060661946118e-05 (change=42.352897089670414 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,012 | INFO     | sum of square deviations: 120605052.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | sum of deviations: 63710901.00000001
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | mean y: 2360294.0547945206
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | intersect: 2360294.0547945206
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | chi2: 6.821770316052885e-05
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | current chi2=6.821770316052885e-05 (change=30.47566101471839 %)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | left removable region not found
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | sum of square deviations: 379832238.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | sum of deviations: 3828374579.0000005
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | mean x (centered): 0.0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,013 | INFO     | mean y: 2350986.2242990653
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | intersect: 2350986.2242990653
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | chi2: 1.1038703226832187
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | current memory leak: 10.08 B/s (using 107 data points, chi2=1.10)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | could have reported an average CPU frequency of 4026 MHz (7 samples)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | ..............................
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . Timing measurements:
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . get job = 0 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . initial setup = 4 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . payload setup = 7 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . stage-in = 0 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . payload execution = 6889 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . stage-out = 0 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | . log creation = 0 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,014 | INFO     | ..............................
[2026-05-01 20:47:03] 2026-05-01 19:45:08,394 | INFO     | 
[2026-05-01 20:47:03] 2026-05-01 19:45:08,394 | INFO     | job summary report
[2026-05-01 20:47:03] 2026-05-01 19:45:08,394 | INFO     | --------------------------------------------------
[2026-05-01 20:47:03] 2026-05-01 19:45:08,394 | INFO     | PanDA job id: 7120561441
[2026-05-01 20:47:03] 2026-05-01 19:45:08,394 | INFO     | task id: 49718416
[2026-05-01 20:47:03] 2026-05-01 19:45:08,394 | INFO     | errors: (none)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | pilot state: finished 
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | transexitcode: 0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | exeerrorcode: 0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | exeerrordiag: 
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | exitcode: 0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | exitmsg: OK
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | cpuconsumptiontime: 26749 s
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | nevents: 400
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | neventsw: 0
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | pid: 3349166
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | pgrp: 3349166
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | corecount: 4
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | event service: False
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | sizes: {0: 2277134, 11: 2277134, 6899: 2304531, 6900: 2304530, 6901: 2313654, 6902: 2313792}
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | --------------------------------------------------
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | 
[2026-05-01 20:47:03] 2026-05-01 19:45:08,395 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | job 7120561441 has completed (purged errors)
[2026-05-01 20:47:03] 2026-05-01 19:45:08,437 | INFO     | overall cleanup function is called
[2026-05-01 20:47:03] 2026-05-01 19:45:09,442 | INFO     | --- collectZombieJob: --- 10, [3349166]
[2026-05-01 20:47:03] 2026-05-01 19:45:09,442 | INFO     | zombie collector waiting for pid 3349166
[2026-05-01 20:47:03] 2026-05-01 19:45:09,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 20:47:03] 2026-05-01 19:45:09,442 | INFO     | collected zombie processes
[2026-05-01 20:47:03] 2026-05-01 19:45:09,442 | INFO     | will attempt to kill all subprocesses of pid=3349166
[2026-05-01 20:47:03] 2026-05-01 19:45:09,487 | INFO     | process IDs to be killed: [3349166] (in reverse order)
[2026-05-01 20:47:03] 2026-05-01 19:45:09,560 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 20:47:03] 2026-05-01 19:45:09,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 20:47:03] 2026-05-01 19:45:09,562 | INFO     | did not find any defunct processes belonging to 3349166
[2026-05-01 20:47:03] 2026-05-01 19:45:09,563 | INFO     | did not find any defunct processes belonging to 3349166
[2026-05-01 20:47:03] 2026-05-01 19:45:09,563 | INFO     | Ready for new job
[2026-05-01 20:47:03] 2026-05-01 19:45:09,564 | INFO     | ***************************************
[2026-05-01 20:47:03] 2026-05-01 19:45:09,564 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 20:47:03] 2026-05-01 19:45:09,564 | INFO     | ***************************************
[2026-05-01 20:47:03] 2026-05-01 19:45:09,564 | INFO     | 
[2026-05-01 20:47:03] 2026-05-01 19:45:09,587 | INFO     | architecture information:
[2026-05-01 20:47:03] 2026-05-01 19:45:09,590 | INFO     | executing command: cat /etc/os-release
[2026-05-01 20:47:03] 2026-05-01 19:45:09,616 | INFO     | cat /etc/os-release:
[2026-05-01 20:47:03] NAME="CentOS Linux"
[2026-05-01 20:47:03] VERSION="7 (Core)"
[2026-05-01 20:47:03] ID="centos"
[2026-05-01 20:47:03] ID_LIKE="rhel fedora"
[2026-05-01 20:47:03] VERSION_ID="7"
[2026-05-01 20:47:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 20:47:03] ANSI_COLOR="0;31"
[2026-05-01 20:47:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 20:47:03] HOME_URL="https://www.centos.org/"
[2026-05-01 20:47:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 20:47:03] 
[2026-05-01 20:47:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 20:47:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 20:47:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 20:47:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 20:47:03] 
[2026-05-01 20:47:03] 2026-05-01 19:45:09,616 | INFO     | ***************************************
[2026-05-01 20:47:03] 2026-05-01 19:45:10,118 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-05-01 20:47:03] 2026-05-01 19:45:10,152 | INFO     | sufficient remaining disk space (181722415104 B)
[2026-05-01 20:47:03] 2026-05-01 19:45:10,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | INFO     | update_server=False
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 20:47:03] 2026-05-01 19:45:10,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 20:47:03] 2026-05-01 19:45:10,173 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-01 20:47:03] 2026-05-01 19:45:10,174 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-01 20:47:03] 2026-05-01 19:45:10,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 20:47:03] 2026-05-01 19:45:10,174 | INFO     | will abort loop
[2026-05-01 20:47:03] 2026-05-01 19:45:10,741 | INFO     | all job control threads have been joined
[2026-05-01 20:47:03] 2026-05-01 19:45:10,930 | INFO     | all data control threads have been joined
[2026-05-01 20:47:03] 2026-05-01 19:45:11,154 | INFO     | [job] retrieve thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,178 | INFO     | [job] job monitor thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,226 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,274 | INFO     | all payload control threads have been joined
[2026-05-01 20:47:03] 2026-05-01 19:45:11,310 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,354 | INFO     | [payload] validate_post thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,586 | INFO     | [data] copytool_in thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,742 | INFO     | [job] control thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:11,934 | INFO     | [data] control thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:12,158 | INFO     | [data] copytool_out thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:12,278 | INFO     | [payload] control thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:12,375 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:12,422 | INFO     | [payload] failed_post thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:12,494 | INFO     | [job] validate thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:13,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 20:47:03] 2026-05-01 19:45:13,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 20:47:03] 2026-05-01 19:45:14,082 | INFO     | [job] queue monitor thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:17,298 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:45:21,022 | INFO     | job.realtimelogging is not enabled
[2026-05-01 20:47:03] 2026-05-01 19:45:22,026 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 20:47:03] 2026-05-01 19:46:05,490 | INFO     | [monitor] cgroup control has ended
[2026-05-01 20:47:03] 2026-05-01 19:46:05,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498545727296)>', '<ExcThread(monitor, started 140497901315840)>']
[2026-05-01 20:47:03] 2026-05-01 19:46:06,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 20:47:03] 2026-05-01 19:46:06,378 | INFO     | [monitor] control thread has ended
[2026-05-01 20:47:03] 2026-05-01 19:46:10,790 | INFO     | all workflow threads have been joined
[2026-05-01 20:47:03] 2026-05-01 19:46:10,790 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 20:47:03] 2026-05-01 19:46:10,790 | INFO     | traces error code: 0
[2026-05-01 20:47:03] 2026-05-01 19:46:10,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 20:47:03] 2026-05-01 19:46:10,882 [wrapper] ==== pilot stdout END ====
[2026-05-01 20:47:03] 2026-05-01 19:46:10,887 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 20:47:03] 2026-05-01 19:46:10,895 [wrapper] pilotpid: 3344026
[2026-05-01 20:47:03] 2026-05-01 19:46:10,903 [wrapper] Pilot exit status: 0
[2026-05-01 20:47:03] 2026-05-01 19:46:10,923 [wrapper] pandaids: 7120561441
[2026-05-01 20:47:03] 2026-05-01 19:46:10,955 [wrapper] cleanup supervisor_pilot 3399264 3344027
[2026-05-01 20:47:03] 2026-05-01 19:46:10,959 [wrapper] Test setup, not cleaning
[2026-05-01 20:47:03] 2026-05-01 19:46:10,967 [wrapper] apfmon messages muted
[2026-05-01 20:47:03] 2026-05-01 19:46:10,986 [wrapper] ==== wrapper stdout END ====
[2026-05-01 20:47:03] 2026-05-01 19:46:10,991 [wrapper] ==== wrapper stderr END ====
[2026-05-01 20:47:03]  *** Error codes and diagnostics ***
[2026-05-01 20:47:03]     "exeErrorCode": 0,
[2026-05-01 20:47:03]     "pilotErrorCode": 0,
[2026-05-01 20:47:03]  *** Listing of results directory ***
[2026-05-01 20:47:03] total 621644
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc    683926 May  1 15:14 pilot3.tar.gz
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc      5631 May  1 15:15 queuedata.json
[2026-05-01 20:47:03] -rwx------ 1 boinc boinc     36322 May  1 15:16 runpilot2-wrapper.sh
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc       100 May  1 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 20:47:03] -rwxr-xr-x 1 boinc boinc      7986 May  1 17:49 run_atlas
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc       105 May  1 17:49 job.xml
[2026-05-01 20:47:03] -rw-r--r-- 2 boinc boinc     15667 May  1 17:49 start_atlas.sh
[2026-05-01 20:47:03] drwxrwx--x 2 boinc boinc      4096 May  1 17:49 shared
[2026-05-01 20:47:03] -rw-r--r-- 2 boinc boinc    697432 May  1 17:49 input.tar.gz
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc      6515 May  1 17:49 init_data.xml
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc         0 May  1 17:49 boinc_setup_complete
[2026-05-01 20:47:03] -rw-r--r-- 2 boinc boinc 442616537 May  1 17:49 EVNT.46373187._000183.pool.root.1
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc         0 May  1 17:49 boinc_lockfile
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc      2596 May  1 17:49 pandaJob.out
[2026-05-01 20:47:03] -rw------- 1 boinc boinc   1003051 May  1 17:49 agis_schedconf.cvmfs.json
[2026-05-01 20:47:03] -rw------- 1 boinc boinc   1508687 May  1 17:49 agis_ddmendpoints.agis.ALL.json
[2026-05-01 20:47:03] -rw------- 1 boinc boinc       437 May  1 17:49 workernode_map.json
[2026-05-01 20:47:03] drwx------ 5 boinc boinc      4096 May  1 17:49 pilot3
[2026-05-01 20:47:03] -rw------- 1 boinc boinc        95 May  1 19:44 pilot_heartbeat.json
[2026-05-01 20:47:03] -rw------- 1 boinc boinc 187895354 May  1 19:44 HITS.49718416._020279.pool.root.1
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc       489 May  1 19:44 boinc_task_state.xml
[2026-05-01 20:47:03] -rw------- 1 boinc boinc      1014 May  1 19:45 memory_monitor_summary.json
[2026-05-01 20:47:03] -rw------- 1 boinc boinc    266298 May  1 19:45 log.49718416._020279.job.log.tgz.1
[2026-05-01 20:47:03] -rw------- 1 boinc boinc      6344 May  1 19:45 heartbeat_new.json
[2026-05-01 20:47:03] -rw------- 1 boinc boinc      6235 May  1 19:45 heartbeat.json
[2026-05-01 20:47:03] -rw------- 1 boinc boinc      4817 May  1 19:46 pilotlog.txt
[2026-05-01 20:47:03] -rw------- 1 boinc boinc    691677 May  1 19:46 log.49718416._020279.job.log.1
[2026-05-01 20:47:03] -rw------- 1 boinc boinc       357 May  1 19:46 output.list
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc       410 May  1 19:46 runtime_log
[2026-05-01 20:47:03] -rw------- 1 boinc boinc    972800 May  1 19:46 result.tar.gz
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc      8562 May  1 19:46 runtime_log.err
[2026-05-01 20:47:03] -rw------- 1 boinc boinc       660 May  1 19:46 c3cbef5cea96.diag
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc      8192 May  1 20:47 boinc_mmap_file
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc        27 May  1 20:47 wrapper_checkpoint.txt
[2026-05-01 20:47:03] -rw-r--r-- 1 boinc boinc     20912 May  1 20:47 stderr.txt
[2026-05-01 20:47:03] HITS file was successfully produced:
[2026-05-01 20:47:03] -rw------- 1 boinc boinc 187895354 May  1 19:44 shared/HITS.pool.root.1
[2026-05-01 20:47:03]  *** Contents of shared directory: ***
[2026-05-01 20:47:03] total 617396
[2026-05-01 20:47:03] -rw-r--r-- 2 boinc boinc     15667 May  1 17:49 start_atlas.sh
[2026-05-01 20:47:03] -rw-r--r-- 2 boinc boinc    697432 May  1 17:49 input.tar.gz
[2026-05-01 20:47:03] -rw-r--r-- 2 boinc boinc 442616537 May  1 17:49 ATLAS.root_0
[2026-05-01 20:47:03] -rw------- 1 boinc boinc 187895354 May  1 19:44 HITS.pool.root.1
[2026-05-01 20:47:03] -rw------- 1 boinc boinc    972800 May  1 19:46 result.tar.gz
20:47:05 (3340206): run_atlas exited; CPU time 26793.395461
20:47:05 (3340206): called boinc_finish(0)

</stderr_txt>
]]>

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