Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:05 (37236): wrapper (7.7.26015): starting
20:35:05 (37236): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 20:35:06] Arguments: --nthreads 4
[2026-05-04 20:35:06] Threads: 4
[2026-05-04 20:35:06] Checking for CVMFS
[2026-05-04 20:35:06] No cvmfs_config command found, will try listing directly
[2026-05-04 20:35:06] CVMFS is ok
[2026-05-04 20:35:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 20:35:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 20:35:06] Further information can be found at the LHC@home message board.
[2026-05-04 20:35:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 20:35:06] Checking for apptainer binary...
[2026-05-04 20:35:06] which: no apptainer in ((null))
[2026-05-04 20:35:06] apptainer is not installed, using version from CVMFS
[2026-05-04 20:35:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 20:35:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-04 20:35:06] apptainer works
[2026-05-04 20:35:06] Set ATHENA_PROC_NUMBER=4
[2026-05-04 20:35:06] Set ATHENA_CORE_NUMBER=4
[2026-05-04 20:35:06] Starting ATLAS job with PandaID=7120559384
[2026-05-04 20:35:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 23:35:56]  *** The last 200 lines of the pilot log: ***
[2026-05-04 23:35:56] 2026-05-04 21:35:22,688 | INFO     | using path: /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7120559384/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,689 | INFO     | extracted standard info from prmon json
[2026-05-04 23:35:56] 2026-05-04 21:35:22,689 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 23:35:56] 2026-05-04 21:35:22,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 23:35:56] 2026-05-04 21:35:22,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 23:35:56] 2026-05-04 21:35:22,693 | INFO     | fitting pss+swap vs Time
[2026-05-04 23:35:56] 2026-05-04 21:35:22,693 | INFO     | sum of square deviations: 1719429448.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,695 | INFO     | sum of deviations: 16471299422.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,695 | INFO     | mean x (centered): 0.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,695 | INFO     | mean y: 2295241.0903954804
[2026-05-04 23:35:56] 2026-05-04 21:35:22,695 | INFO     | intersect: 2295241.0903954804
[2026-05-04 23:35:56] 2026-05-04 21:35:22,695 | INFO     | chi2: 2.2238925373335774
[2026-05-04 23:35:56] 2026-05-04 21:35:22,696 | INFO     | sum of square deviations: 1577789583.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,697 | INFO     | sum of deviations: 26887336548.999996
[2026-05-04 23:35:56] 2026-05-04 21:35:22,697 | INFO     | mean x (centered): 0.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,697 | INFO     | mean y: 2306181.2325581396
[2026-05-04 23:35:56] 2026-05-04 21:35:22,697 | INFO     | intersect: 2306181.2325581396
[2026-05-04 23:35:56] 2026-05-04 21:35:22,697 | INFO     | chi2: 1.4182202846655743
[2026-05-04 23:35:56] 2026-05-04 21:35:22,698 | INFO     | current chi2=1.4182202846655743 (change=36.22802087523506 %)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,698 | INFO     | sum of square deviations: 1444149868.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,699 | INFO     | sum of deviations: 25959682892.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,699 | INFO     | mean x (centered): 0.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,699 | INFO     | mean y: 2305122.3173652696
[2026-05-04 23:35:56] 2026-05-04 21:35:22,699 | INFO     | intersect: 2305122.3173652696
[2026-05-04 23:35:56] 2026-05-04 21:35:22,699 | INFO     | chi2: 1.419079795462308
[2026-05-04 23:35:56] 2026-05-04 21:35:22,700 | INFO     | current chi2=1.419079795462308 (change=-0.06060488670393123 %)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,700 | INFO     | right removable region: 166
[2026-05-04 23:35:56] 2026-05-04 21:35:22,700 | INFO     | sum of square deviations: 1577789583.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,701 | INFO     | sum of deviations: -7503885232.000002
[2026-05-04 23:35:56] 2026-05-04 21:35:22,701 | INFO     | mean x (centered): 0.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,701 | INFO     | mean y: 2320700.430232558
[2026-05-04 23:35:56] 2026-05-04 21:35:22,701 | INFO     | intersect: 2320700.430232558
[2026-05-04 23:35:56] 2026-05-04 21:35:22,701 | INFO     | chi2: 0.8299307397084676
[2026-05-04 23:35:56] 2026-05-04 21:35:22,702 | INFO     | current chi2=0.8299307397084676 (change=62.68116710785201 %)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,702 | INFO     | sum of square deviations: 1444149868.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,703 | INFO     | sum of deviations: -7976454915.999999
[2026-05-04 23:35:56] 2026-05-04 21:35:22,703 | INFO     | mean x (centered): 0.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,703 | INFO     | mean y: 2321236.988023952
[2026-05-04 23:35:56] 2026-05-04 21:35:22,703 | INFO     | intersect: 2321236.988023952
[2026-05-04 23:35:56] 2026-05-04 21:35:22,703 | INFO     | chi2: 0.8298826001586135
[2026-05-04 23:35:56] 2026-05-04 21:35:22,703 | INFO     | current chi2=0.8298826001586135 (change=0.005800429789005637 %)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,704 | INFO     | left removable region: 10
[2026-05-04 23:35:56] 2026-05-04 21:35:22,704 | INFO     | sum of square deviations: 1177156955.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,705 | INFO     | sum of deviations: 2291741573.9999995
[2026-05-04 23:35:56] 2026-05-04 21:35:22,705 | INFO     | mean x (centered): 0.0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,705 | INFO     | mean y: 2333348.512820513
[2026-05-04 23:35:56] 2026-05-04 21:35:22,705 | INFO     | intersect: 2333348.512820513
[2026-05-04 23:35:56] 2026-05-04 21:35:22,705 | INFO     | chi2: 0.00040460621808222693
[2026-05-04 23:35:56] 2026-05-04 21:35:22,705 | INFO     | current memory leak: 1.95 B/s (using 156 data points, chi2=0.00)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | could have reported an average CPU frequency of 2718 MHz (9 samples)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | ..............................
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | . Timing measurements:
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | . get job = 0 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | . initial setup = 9 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | . payload setup = 16 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | . stage-in = 0 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,706 | INFO     | . payload execution = 10757 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,707 | INFO     | . stage-out = 0 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,707 | INFO     | . log creation = 0 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,707 | INFO     | ..............................
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | 
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | job summary report
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | --------------------------------------------------
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | PanDA job id: 7120559384
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | task id: 49718416
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | errors: (none)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,799 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | pilot state: finished 
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | transexitcode: 0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | exeerrorcode: 0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | exeerrordiag: 
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | exitcode: 0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | exitmsg: OK
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | cpuconsumptiontime: 40469 s
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | nevents: 400
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | neventsw: 0
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | pid: 64561
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | pgrp: 64561
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | corecount: 4
[2026-05-04 23:35:56] 2026-05-04 21:35:22,800 | INFO     | event service: False
[2026-05-04 23:35:56] 2026-05-04 21:35:22,801 | INFO     | sizes: {0: 2270589, 1: 2272219, 11: 2272247, 10777: 2301708, 10778: 2310784, 10781: 2310986}
[2026-05-04 23:35:56] 2026-05-04 21:35:22,801 | INFO     | --------------------------------------------------
[2026-05-04 23:35:56] 2026-05-04 21:35:22,801 | INFO     | 
[2026-05-04 23:35:56] 2026-05-04 21:35:22,801 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-05-04 23:35:56] 2026-05-04 21:35:22,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,831 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 23:35:56] 2026-05-04 21:35:22,832 | INFO     | job 7120559384 has completed (purged errors)
[2026-05-04 23:35:56] 2026-05-04 21:35:22,832 | INFO     | overall cleanup function is called
[2026-05-04 23:35:56] 2026-05-04 21:35:23,841 | INFO     | --- collectZombieJob: --- 10, [64561]
[2026-05-04 23:35:56] 2026-05-04 21:35:23,841 | INFO     | zombie collector waiting for pid 64561
[2026-05-04 23:35:56] 2026-05-04 21:35:23,841 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 23:35:56] 2026-05-04 21:35:23,841 | INFO     | collected zombie processes
[2026-05-04 23:35:56] 2026-05-04 21:35:23,841 | INFO     | will attempt to kill all subprocesses of pid=64561
[2026-05-04 23:35:56] 2026-05-04 21:35:24,452 | INFO     | process IDs to be killed: [64561] (in reverse order)
[2026-05-04 23:35:56] 2026-05-04 21:35:24,768 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 23:35:56] 2026-05-04 21:35:24,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 23:35:56] 2026-05-04 21:35:24,799 | INFO     | did not find any defunct processes belonging to 64561
[2026-05-04 23:35:56] 2026-05-04 21:35:24,830 | INFO     | did not find any defunct processes belonging to 64561
[2026-05-04 23:35:56] 2026-05-04 21:35:24,831 | INFO     | Ready for new job
[2026-05-04 23:35:56] 2026-05-04 21:35:24,833 | INFO     | ***************************************
[2026-05-04 23:35:56] 2026-05-04 21:35:24,833 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 23:35:56] 2026-05-04 21:35:24,833 | INFO     | ***************************************
[2026-05-04 23:35:56] 2026-05-04 21:35:24,833 | INFO     | 
[2026-05-04 23:35:56] 2026-05-04 21:35:24,842 | INFO     | architecture information:
[2026-05-04 23:35:56] 2026-05-04 21:35:24,842 | INFO     | executing command: cat /etc/os-release
[2026-05-04 23:35:56] 2026-05-04 21:35:24,869 | INFO     | cat /etc/os-release:
[2026-05-04 23:35:56] NAME="CentOS Linux"
[2026-05-04 23:35:56] VERSION="7 (Core)"
[2026-05-04 23:35:56] ID="centos"
[2026-05-04 23:35:56] ID_LIKE="rhel fedora"
[2026-05-04 23:35:56] VERSION_ID="7"
[2026-05-04 23:35:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 23:35:56] ANSI_COLOR="0;31"
[2026-05-04 23:35:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 23:35:56] HOME_URL="https://www.centos.org/"
[2026-05-04 23:35:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 23:35:56] 
[2026-05-04 23:35:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 23:35:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 23:35:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 23:35:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 23:35:56] 
[2026-05-04 23:35:56] 2026-05-04 21:35:24,873 | INFO     | ***************************************
[2026-05-04 23:35:56] 2026-05-04 21:35:25,376 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-05-04 23:35:56] 2026-05-04 21:35:25,402 | INFO     | sufficient remaining disk space (261780144128 B)
[2026-05-04 23:35:56] 2026-05-04 21:35:25,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 23:35:56] 2026-05-04 21:35:25,403 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 23:35:56] 2026-05-04 21:35:25,403 | INFO     | update_server=False
[2026-05-04 23:35:56] 2026-05-04 21:35:25,404 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 23:35:56] 2026-05-04 21:35:25,519 | INFO     | all job control threads have been joined
[2026-05-04 23:35:56] 2026-05-04 21:35:25,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 23:35:56] 2026-05-04 21:35:25,801 | INFO     | all data control threads have been joined
[2026-05-04 23:35:56] 2026-05-04 21:35:25,978 | INFO     | all payload control threads have been joined
[2026-05-04 23:35:56] 2026-05-04 21:35:26,128 | WARNING  | process 64561 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 23:35:56] 2026-05-04 21:35:26,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 23:35:56] 2026-05-04 21:35:26,409 | INFO     | [job] retrieve thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:26,524 | INFO     | [job] control thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:26,664 | INFO     | [payload] validate_post thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:26,687 | INFO     | using path: /var/lib/boinc/var/slot48/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 23:35:56] 2026-05-04 21:35:26,805 | INFO     | [payload] failed_post thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:26,806 | INFO     | [data] control thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:26,898 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:26,983 | INFO     | [payload] control thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:27,380 | INFO     | number of running child processes to parent process 64561: 1
[2026-05-04 23:35:56] 2026-05-04 21:35:27,380 | INFO     | maximum number of monitored processes: 6
[2026-05-04 23:35:56] 2026-05-04 21:35:27,381 | INFO     | aborting job monitoring since job object (job id=7120559384) has expired
[2026-05-04 23:35:56] 2026-05-04 21:35:27,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 23:35:56] 2026-05-04 21:35:27,381 | INFO     | will abort loop
[2026-05-04 23:35:56] 2026-05-04 21:35:27,519 | INFO     | [data] copytool_in thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:27,588 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:27,588 | INFO     | [job] validate thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:27,605 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:27,635 | INFO     | [data] copytool_out thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:27,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 23:35:56] 2026-05-04 21:35:28,392 | INFO     | [job] job monitor thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:28,817 | INFO     | [job] queue monitor thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:30,236 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:36,050 | INFO     | job.realtimelogging is not enabled
[2026-05-04 23:35:56] 2026-05-04 21:35:37,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 23:35:56] 2026-05-04 21:35:48,268 | INFO     | [monitor] cgroup control has ended
[2026-05-04 23:35:56] 2026-05-04 21:35:50,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22631968282432)>', '<ExcThread(monitor, started 22631733806848)>']
[2026-05-04 23:35:56] 2026-05-04 21:35:55,362 | INFO     | all workflow threads have been joined
[2026-05-04 23:35:56] 2026-05-04 21:35:55,363 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 23:35:56] 2026-05-04 21:35:55,363 | INFO     | traces error code: 0
[2026-05-04 23:35:56] 2026-05-04 21:35:55,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 23:35:56] 2026-05-04 21:35:55,787 | INFO     | PID=48829 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-04 23:35:56] 2026-05-04 21:35:55,787 | INFO     | .. there are 23 such processes running
[2026-05-04 23:35:56] 2026-05-04 21:35:55,788 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 23:35:56] 2026-05-04 21:35:55,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 23:35:56] 2026-05-04 21:35:55,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 23:35:56] 2026-05-04 21:35:55,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 23:35:56] 2026-05-04 21:35:55,788 | INFO     | [monitor] control thread has ended
[2026-05-04 23:35:56] 2026-05-04 21:35:55,914 [wrapper] ==== pilot stdout END ====
[2026-05-04 23:35:56] 2026-05-04 21:35:55,918 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 23:35:56] 2026-05-04 21:35:55,922 [wrapper] pilotpid: 48829
[2026-05-04 23:35:56] 2026-05-04 21:35:55,926 [wrapper] Pilot exit status: 0
[2026-05-04 23:35:56] 2026-05-04 21:35:55,941 [wrapper] pandaids: 7120559384
[2026-05-04 23:35:56] 2026-05-04 21:35:56,142 [wrapper] cleanup supervisor_pilot  550562 48830
[2026-05-04 23:35:56] 2026-05-04 21:35:56,148 [wrapper] Test setup, not cleaning
[2026-05-04 23:35:56] 2026-05-04 21:35:56,152 [wrapper] apfmon messages muted
[2026-05-04 23:35:56] 2026-05-04 21:35:56,156 [wrapper] ==== wrapper stdout END ====
[2026-05-04 23:35:56] 2026-05-04 21:35:56,161 [wrapper] ==== wrapper stderr END ====
[2026-05-04 23:35:56]  *** Error codes and diagnostics ***
[2026-05-04 23:35:56]     "exeErrorCode": 0,
[2026-05-04 23:35:56]     "pilotErrorCode": 0,
[2026-05-04 23:35:56]  *** Listing of results directory ***
[2026-05-04 23:35:56] total 622916
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc    683926 May  1 15:47 pilot3.tar.gz
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc      5631 May  1 15:52 queuedata.json
[2026-05-04 23:35:56] -rwx------. 1 boinc boinc     36322 May  1 15:54 runpilot2-wrapper.sh
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc       100 May  4 20:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 23:35:56] -rwxr-xr-x. 1 boinc boinc      7986 May  4 20:34 run_atlas
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc       105 May  4 20:34 job.xml
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc      6541 May  4 20:35 init_data.xml
[2026-05-04 23:35:56] -rw-r--r--. 2 boinc boinc 441314924 May  4 20:35 EVNT.46373187._000166.pool.root.1
[2026-05-04 23:35:56] -rw-r--r--. 2 boinc boinc    697430 May  4 20:35 input.tar.gz
[2026-05-04 23:35:56] -rw-r--r--. 2 boinc boinc     15667 May  4 20:35 start_atlas.sh
[2026-05-04 23:35:56] drwxrwx--x. 2 boinc boinc      4096 May  4 20:35 shared
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc         0 May  4 20:35 boinc_lockfile
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc      2596 May  4 20:35 pandaJob.out
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc   1002597 May  4 20:35 agis_schedconf.cvmfs.json
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc   1505918 May  4 20:35 agis_ddmendpoints.agis.ALL.json
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc       434 May  4 20:35 workernode_map.json
[2026-05-04 23:35:56] drwx------. 5 boinc boinc      4096 May  4 20:35 pilot3
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc 189769159 May  4 23:34 HITS.49718416._019444.pool.root.1
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc       488 May  4 23:35 boinc_task_state.xml
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc      1038 May  4 23:35 memory_monitor_summary.json
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc        95 May  4 23:35 pilot_heartbeat.json
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc    328362 May  4 23:35 log.49718416._019444.job.log.tgz.1
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc      6365 May  4 23:35 heartbeat_new.json
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc      6256 May  4 23:35 heartbeat.json
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc        27 May  4 23:35 wrapper_checkpoint.txt
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc      8192 May  4 23:35 boinc_mmap_file
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc       822 May  4 23:35 pilotlog.txt
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc    999136 May  4 23:35 log.49718416._019444.job.log.1
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc       357 May  4 23:35 output.list
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc       410 May  4 23:35 runtime_log
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc   1341440 May  4 23:35 result.tar.gz
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc      8828 May  4 23:35 runtime_log.err
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc       665 May  4 23:35 b07bccea2674.diag
[2026-05-04 23:35:56] -rw-r--r--. 1 boinc boinc     20796 May  4 23:35 stderr.txt
[2026-05-04 23:35:56] HITS file was successfully produced:
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc 189769159 May  4 23:34 shared/HITS.pool.root.1
[2026-05-04 23:35:56]  *** Contents of shared directory: ***
[2026-05-04 23:35:56] total 618316
[2026-05-04 23:35:56] -rw-r--r--. 2 boinc boinc 441314924 May  4 20:35 ATLAS.root_0
[2026-05-04 23:35:56] -rw-r--r--. 2 boinc boinc    697430 May  4 20:35 input.tar.gz
[2026-05-04 23:35:56] -rw-r--r--. 2 boinc boinc     15667 May  4 20:35 start_atlas.sh
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc 189769159 May  4 23:34 HITS.pool.root.1
[2026-05-04 23:35:56] -rw-------. 1 boinc boinc   1341440 May  4 23:35 result.tar.gz
23:35:58 (37236): run_atlas exited; CPU time 41092.257378
23:35:58 (37236): called boinc_finish(0)

</stderr_txt>
]]>

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