Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:14 (1018444): wrapper (7.7.26015): starting
16:33:14 (1018444): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 16:33:14] Arguments: --nthreads 8
[2026-05-01 16:33:14] Threads: 8
[2026-05-01 16:33:14] Checking for CVMFS
[2026-05-01 16:33:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 16:33:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 16:33:15] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 16:33:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 16:33:16] 2.13.3.0 11112 1836 133808 159106 2 465 24623632 32935936 17636 16776704 0 6290516 99.226 11685976 34558 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-01 16:33:16] CVMFS is ok
[2026-05-01 16:33:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 16:33:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 16:33:16] Further information can be found at the LHC@home message board.
[2026-05-01 16:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 16:33:16] Checking for apptainer binary...
[2026-05-01 16:33:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 16:33:16] Running /usr/bin/apptainer --version
[2026-05-01 16:33:16] apptainer version 1.4.5-3.el9
[2026-05-01 16:33:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 16:33:17] c6-2-29-1.aglt2.org
[2026-05-01 16:33:17] apptainer works
[2026-05-01 16:33:17] Set ATHENA_PROC_NUMBER=8
[2026-05-01 16:33:17] Set ATHENA_CORE_NUMBER=8
[2026-05-01 16:33:17] Starting ATLAS job with PandaID=7120511357
[2026-05-01 16:33:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 19:02:27]  *** The last 200 lines of the pilot log: ***
[2026-05-01 19:02:27] 2026-05-01 23:01:51,198 | INFO     | sum of square deviations: 850947910.3999988
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | sum of deviations: -22525794271.2
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | mean x (centered): 0.0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | mean y: 2595612.6714285715
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | intersect: 2595612.6714285715
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | chi2: 1.852195409377688
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | current chi2=1.852195409377688 (change=26.78308771298831 %)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,199 | INFO     | sum of square deviations: 763006466.5481484
[2026-05-01 19:02:27] 2026-05-01 23:01:51,200 | INFO     | sum of deviations: -20897689663.740734
[2026-05-01 19:02:27] 2026-05-01 23:01:51,200 | INFO     | mean x (centered): 0.0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,200 | INFO     | mean y: 2598437.4814814813
[2026-05-01 19:02:27] 2026-05-01 23:01:51,200 | INFO     | intersect: 2598437.4814814813
[2026-05-01 19:02:27] 2026-05-01 23:01:51,200 | INFO     | chi2: 1.8481299509183973
[2026-05-01 19:02:27] 2026-05-01 23:01:51,201 | INFO     | current chi2=1.8481299509183973 (change=0.2194940360346037 %)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,201 | INFO     | right removable region: 134
[2026-05-01 19:02:27] 2026-05-01 23:01:51,201 | INFO     | sum of square deviations: 850963967.2214278
[2026-05-01 19:02:27] 2026-05-01 23:01:51,206 | INFO     | sum of deviations: -54974215026.250046
[2026-05-01 19:02:27] 2026-05-01 23:01:51,206 | INFO     | mean x (centered): 0.0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,206 | INFO     | mean y: 2614152.25
[2026-05-01 19:02:27] 2026-05-01 23:01:51,206 | INFO     | intersect: 2614152.25
[2026-05-01 19:02:27] 2026-05-01 23:01:51,206 | INFO     | chi2: 0.9738811299163581
[2026-05-01 19:02:27] 2026-05-01 23:01:51,206 | INFO     | current chi2=0.9738811299163581 (change=61.50267466054288 %)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,207 | INFO     | sum of square deviations: 763003796.6370387
[2026-05-01 19:02:27] 2026-05-01 23:01:51,207 | INFO     | sum of deviations: -50844616881.83705
[2026-05-01 19:02:27] 2026-05-01 23:01:51,207 | INFO     | mean x (centered): 0.0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,207 | INFO     | mean y: 2606918.251851852
[2026-05-01 19:02:27] 2026-05-01 23:01:51,207 | INFO     | intersect: 2606918.251851852
[2026-05-01 19:02:27] 2026-05-01 23:01:51,208 | INFO     | chi2: 0.9646603160811584
[2026-05-01 19:02:27] 2026-05-01 23:01:51,208 | INFO     | current chi2=0.9646603160811584 (change=0.94681101747927 %)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,208 | INFO     | left removable region: 10
[2026-05-01 19:02:27] 2026-05-01 23:01:51,208 | INFO     | sum of square deviations: 591263158.7338698
[2026-05-01 19:02:27] 2026-05-01 23:01:51,209 | INFO     | sum of deviations: -38027408148.63711
[2026-05-01 19:02:27] 2026-05-01 23:01:51,209 | INFO     | mean x (centered): 0.0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,209 | INFO     | mean y: 2630816.7983870967
[2026-05-01 19:02:27] 2026-05-01 23:01:51,209 | INFO     | intersect: 2630816.7983870967
[2026-05-01 19:02:27] 2026-05-01 23:01:51,213 | INFO     | chi2: 0.23270457708575248
[2026-05-01 19:02:27] 2026-05-01 23:01:51,213 | INFO     | current memory leak: -64.32 B/s (using 124 data points, chi2=0.23)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | could have reported an average CPU frequency of 2952 MHz (8 samples)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | ..............................
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | . Timing measurements:
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | . get job = 0 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | . initial setup = 15 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | . payload setup = 35 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | . stage-in = 0 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,214 | INFO     | . payload execution = 8822 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,215 | INFO     | . stage-out = 1 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,215 | INFO     | . log creation = 0 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,215 | INFO     | ..............................
[2026-05-01 19:02:27] 2026-05-01 23:01:51,413 | WARNING  | process 1030256 can no longer be monitored (due to stat problems) - aborting
[2026-05-01 19:02:27] 2026-05-01 23:01:51,414 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7120511357/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,414 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3058905 B
[2026-05-01 19:02:27] 2026-05-01 23:01:51,415 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15604 B
[2026-05-01 19:02:27] 2026-05-01 23:01:51,415 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,504 | INFO     | sufficient remaining disk space (74655465472 B)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,504 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,506 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7120511357: 3427295 B (within 5033164800 B limit)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,506 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7120511357/HITS.49263200._081049.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,506 | INFO     | total size of present files: 0 B (workdir size: 3427295 B)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,506 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7120511357/HITS.49263200._081049.pool.root.1 since it does not exist
[2026-05-01 19:02:27] 2026-05-01 23:01:51,507 | INFO     | 
[2026-05-01 19:02:27] 2026-05-01 23:01:51,507 | INFO     | job summary report
[2026-05-01 19:02:27] 2026-05-01 23:01:51,507 | INFO     | --------------------------------------------------
[2026-05-01 19:02:27] 2026-05-01 23:01:51,507 | INFO     | PanDA job id: 7120511357
[2026-05-01 19:02:27] 2026-05-01 23:01:51,507 | INFO     | task id: 49263200
[2026-05-01 19:02:27] 2026-05-01 23:01:51,507 | INFO     | errors: (none)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | pilot state: finished 
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | transexitcode: 0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | exeerrorcode: 0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | exeerrordiag: 
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | exitcode: 0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | exitmsg: OK
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | cpuconsumptiontime: 39049 s
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | nevents: 400
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | neventsw: 0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | pid: 1030256
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | pgrp: 1030256
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | corecount: 8
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | event service: False
[2026-05-01 19:02:27] 2026-05-01 23:01:51,508 | INFO     | sizes: {0: 2275355, 1: 2277184, 2: 2277184, 8860: 2305421, 8861: 2305420, 8864: 2314474, 8866: 2314658, 8867: 2314852}
[2026-05-01 19:02:27] 2026-05-01 23:01:51,509 | INFO     | --------------------------------------------------
[2026-05-01 19:02:27] 2026-05-01 23:01:51,509 | INFO     | 
[2026-05-01 19:02:27] 2026-05-01 23:01:51,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 19:02:27] 2026-05-01 23:01:51,562 | INFO     | job 7120511357 has completed (purged errors)
[2026-05-01 19:02:27] 2026-05-01 23:01:51,563 | INFO     | overall cleanup function is called
[2026-05-01 19:02:27] 2026-05-01 23:01:51,873 | INFO     | number of running child processes to parent process 1030256: 1
[2026-05-01 19:02:27] 2026-05-01 23:01:51,885 | INFO     | maximum number of monitored processes: 6
[2026-05-01 19:02:27] 2026-05-01 23:01:51,885 | INFO     | aborting job monitoring since job object (job id=7120511357) has expired
[2026-05-01 19:02:27] 2026-05-01 23:01:52,589 | INFO     | --- collectZombieJob: --- 10, [1030256]
[2026-05-01 19:02:27] 2026-05-01 23:01:52,589 | INFO     | zombie collector waiting for pid 1030256
[2026-05-01 19:02:27] 2026-05-01 23:01:52,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 19:02:27] 2026-05-01 23:01:52,589 | INFO     | collected zombie processes
[2026-05-01 19:02:27] 2026-05-01 23:01:52,589 | INFO     | will attempt to kill all subprocesses of pid=1030256
[2026-05-01 19:02:27] 2026-05-01 23:01:52,822 | INFO     | PID=1022904 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-01 19:02:27] 2026-05-01 23:01:52,822 | INFO     | .. there are 17 such processes running
[2026-05-01 19:02:27] 2026-05-01 23:01:53,185 | INFO     | process IDs to be killed: [1030256] (in reverse order)
[2026-05-01 19:02:27] 2026-05-01 23:01:53,667 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 19:02:27] 2026-05-01 23:01:53,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 19:02:27] 2026-05-01 23:01:53,703 | INFO     | did not find any defunct processes belonging to 1030256
[2026-05-01 19:02:27] 2026-05-01 23:01:53,733 | INFO     | did not find any defunct processes belonging to 1030256
[2026-05-01 19:02:27] 2026-05-01 23:01:53,734 | INFO     | Ready for new job
[2026-05-01 19:02:27] 2026-05-01 23:01:53,736 | INFO     | ***************************************
[2026-05-01 19:02:27] 2026-05-01 23:01:53,736 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 19:02:27] 2026-05-01 23:01:53,736 | INFO     | ***************************************
[2026-05-01 19:02:27] 2026-05-01 23:01:53,736 | INFO     | 
[2026-05-01 19:02:27] 2026-05-01 23:01:53,739 | INFO     | architecture information:
[2026-05-01 19:02:27] 2026-05-01 23:01:53,740 | INFO     | executing command: cat /etc/os-release
[2026-05-01 19:02:27] 2026-05-01 23:01:53,758 | INFO     | cat /etc/os-release:
[2026-05-01 19:02:27] NAME="CentOS Linux"
[2026-05-01 19:02:27] VERSION="7 (Core)"
[2026-05-01 19:02:27] ID="centos"
[2026-05-01 19:02:27] ID_LIKE="rhel fedora"
[2026-05-01 19:02:27] VERSION_ID="7"
[2026-05-01 19:02:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 19:02:27] ANSI_COLOR="0;31"
[2026-05-01 19:02:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 19:02:27] HOME_URL="https://www.centos.org/"
[2026-05-01 19:02:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 19:02:27] 
[2026-05-01 19:02:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 19:02:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 19:02:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 19:02:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 19:02:27] 
[2026-05-01 19:02:27] 2026-05-01 23:01:53,759 | INFO     | ***************************************
[2026-05-01 19:02:27] 2026-05-01 23:01:54,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-01 19:02:27] 2026-05-01 23:01:54,325 | INFO     | sufficient remaining disk space (74659659776 B)
[2026-05-01 19:02:27] 2026-05-01 23:01:54,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 19:02:27] 2026-05-01 23:01:54,325 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 19:02:27] 2026-05-01 23:01:54,326 | INFO     | update_server=False
[2026-05-01 19:02:27] 2026-05-01 23:01:54,326 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 19:02:27] 2026-05-01 23:01:54,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 19:02:27] 2026-05-01 23:01:54,403 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-01 19:02:27] 2026-05-01 23:01:54,403 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-01 19:02:27] 2026-05-01 23:01:54,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 19:02:27] 2026-05-01 23:01:54,404 | INFO     | will abort loop
[2026-05-01 19:02:27] 2026-05-01 23:01:54,453 | INFO     | all job control threads have been joined
[2026-05-01 19:02:27] 2026-05-01 23:01:54,539 | INFO     | all payload control threads have been joined
[2026-05-01 19:02:27] 2026-05-01 23:01:54,722 | INFO     | all data control threads have been joined
[2026-05-01 19:02:27] 2026-05-01 23:01:55,331 | INFO     | [job] retrieve thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,334 | INFO     | [data] copytool_in thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,409 | INFO     | [job] job monitor thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,433 | INFO     | [job] validate thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,449 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,459 | INFO     | [job] control thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,545 | INFO     | [payload] control thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:55,728 | INFO     | [data] control thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:56,257 | INFO     | [payload] validate_post thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:56,262 | INFO     | [payload] failed_post thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:56,333 | INFO     | [data] copytool_out thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:56,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 19:02:27] 2026-05-01 23:01:56,694 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:56,709 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:01:56,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 19:02:27] 2026-05-01 23:01:57,556 | INFO     | [job] queue monitor thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:02:00,781 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 19:02:27] 2026-05-01 23:02:17,272 | INFO     | [monitor] cgroup control has ended
[2026-05-01 19:02:27] 2026-05-01 23:02:19,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826058381120)>', '<ExcThread(monitor, started 139825571145472)>']
[2026-05-01 19:02:27] 2026-05-01 23:02:24,225 | INFO     | all workflow threads have been joined
[2026-05-01 19:02:27] 2026-05-01 23:02:24,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 19:02:27] 2026-05-01 23:02:24,240 | INFO     | traces error code: 0
[2026-05-01 19:02:27] 2026-05-01 23:02:24,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 19:02:27] 2026-05-01 23:02:25,513 | INFO     | PID=1022904 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 19:02:27] 2026-05-01 23:02:25,514 | INFO     | .. there are 17 such processes running
[2026-05-01 19:02:27] 2026-05-01 23:02:25,514 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 19:02:27] 2026-05-01 23:02:25,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 19:02:27] 2026-05-01 23:02:25,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 19:02:27] 2026-05-01 23:02:25,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 19:02:27] 2026-05-01 23:02:25,514 | INFO     | [monitor] control thread has ended
[2026-05-01 19:02:27] 2026-05-01 23:02:26,528 [wrapper] ==== pilot stdout END ====
[2026-05-01 19:02:27] 2026-05-01 23:02:26,627 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 19:02:27] 2026-05-01 23:02:26,668 [wrapper] pilotpid: 1022904
[2026-05-01 19:02:27] 2026-05-01 23:02:26,684 [wrapper] Pilot exit status: 0
[2026-05-01 19:02:27] 2026-05-01 23:02:26,785 [wrapper] pandaids: 7120511357
[2026-05-01 19:02:27] 2026-05-01 23:02:27,248 [wrapper] cleanup supervisor_pilot 1367594 1022905
[2026-05-01 19:02:27] 2026-05-01 23:02:27,268 [wrapper] Test setup, not cleaning
[2026-05-01 19:02:27] 2026-05-01 23:02:27,283 [wrapper] apfmon messages muted
[2026-05-01 19:02:27] 2026-05-01 23:02:27,306 [wrapper] ==== wrapper stdout END ====
[2026-05-01 19:02:27] 2026-05-01 23:02:27,325 [wrapper] ==== wrapper stderr END ====
[2026-05-01 19:02:27]  *** Error codes and diagnostics ***
[2026-05-01 19:02:27]     "exeErrorCode": 0,
[2026-05-01 19:02:27]     "pilotErrorCode": 0,
[2026-05-01 19:02:27]  *** Listing of results directory ***
[2026-05-01 19:02:27] total 416556
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas    683926 May  1 09:47 pilot3.tar.gz
[2026-05-01 19:02:27] -rwx------. 1 boincer umatlas     36322 May  1 09:48 runpilot2-wrapper.sh
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas      5631 May  1 09:48 queuedata.json
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas       100 May  1 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 19:02:27] -rwxr-xr-x. 1 boincer umatlas      7986 May  1 16:33 run_atlas
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas       105 May  1 16:33 job.xml
[2026-05-01 19:02:27] -rw-r--r--. 2 boincer umatlas 224323682 May  1 16:33 EVNT.49263198._001348.pool.root.1
[2026-05-01 19:02:27] -rw-r--r--. 2 boincer umatlas     15667 May  1 16:33 start_atlas.sh
[2026-05-01 19:02:27] drwxrwx--x. 2 boincer umatlas      4096 May  1 16:33 shared
[2026-05-01 19:02:27] -rw-r--r--. 2 boincer umatlas    697424 May  1 16:33 input.tar.gz
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas         0 May  1 16:33 boinc_lockfile
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas      2574 May  1 16:33 pandaJob.out
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas        57 May  1 16:33 setup.sh.local
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas   1003006 May  1 16:33 agis_schedconf.cvmfs.json
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas   1508687 May  1 16:33 agis_ddmendpoints.agis.ALL.json
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas       442 May  1 16:34 workernode_map.json
[2026-05-01 19:02:27] drwx------. 5 boincer umatlas      4096 May  1 16:34 pilot3
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas 195773356 May  1 19:00 HITS.49263200._081049.pool.root.1
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas       487 May  1 19:00 boinc_task_state.xml
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas        95 May  1 19:01 pilot_heartbeat.json
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas      1040 May  1 19:01 memory_monitor_summary.json
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas    339008 May  1 19:01 log.49263200._081049.job.log.tgz.1
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas      6414 May  1 19:01 heartbeat_new.json
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas      6305 May  1 19:01 heartbeat.json
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas      6754 May  1 19:02 init_data.xml
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas      8192 May  1 19:02 boinc_mmap_file
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas        27 May  1 19:02 wrapper_checkpoint.txt
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas       823 May  1 19:02 pilotlog.txt
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas    819866 May  1 19:02 log.49263200._081049.job.log.1
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas       357 May  1 19:02 output.list
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas       410 May  1 19:02 runtime_log
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas   1177600 May  1 19:02 result.tar.gz
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas      8969 May  1 19:02 runtime_log.err
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas       653 May  1 19:02 af2dd891e540.diag
[2026-05-01 19:02:27] -rw-r--r--. 1 boincer umatlas     21699 May  1 19:02 stderr.txt
[2026-05-01 19:02:27] HITS file was successfully produced:
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas 195773356 May  1 19:00 shared/HITS.pool.root.1
[2026-05-01 19:02:27]  *** Contents of shared directory: ***
[2026-05-01 19:02:27] total 412112
[2026-05-01 19:02:27] -rw-r--r--. 2 boincer umatlas 224323682 May  1 16:33 ATLAS.root_0
[2026-05-01 19:02:27] -rw-r--r--. 2 boincer umatlas     15667 May  1 16:33 start_atlas.sh
[2026-05-01 19:02:27] -rw-r--r--. 2 boincer umatlas    697424 May  1 16:33 input.tar.gz
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas 195773356 May  1 19:00 HITS.pool.root.1
[2026-05-01 19:02:27] -rw-------. 1 boincer umatlas   1177600 May  1 19:02 result.tar.gz
19:02:29 (1018444): run_atlas exited; CPU time 39221.785788
19:02:29 (1018444): called boinc_finish(0)

</stderr_txt>
]]>

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