Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:19:28 (4293): wrapper (7.7.26015): starting
03:19:28 (4293): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 03:19:28] Arguments: --nthreads 8
[2026-05-02 03:19:28] Threads: 8
[2026-05-02 03:19:28] Checking for CVMFS
[2026-05-02 03:19:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 03:19:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 03:19:32] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 03:19:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 03:19:34] 2.11.2.0 26317 23533 101448 159114 3 53 24974648 25165824 96 130560 0 7387666 99.909 2660529 3427 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 03:19:34] CVMFS is ok
[2026-05-02 03:19:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 03:19:34] Checking for apptainer binary...
[2026-05-02 03:19:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 03:19:34] Running /usr/bin/apptainer --version
[2026-05-02 03:19:34] apptainer version 1.3.2-1.el7
[2026-05-02 03:19:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 03:19:57] cg-vwn384.simple-grid.lan
[2026-05-02 03:19:57] apptainer works
[2026-05-02 03:19:57] Set ATHENA_PROC_NUMBER=8
[2026-05-02 03:19:57] Set ATHENA_CORE_NUMBER=8
[2026-05-02 03:19:57] Starting ATLAS job with PandaID=7120398348
[2026-05-02 03:19:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 07:59:02]  *** The last 200 lines of the pilot log: ***
[2026-05-02 07:59:02] 2026-05-02 05:58:18,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 07:59:02] 2026-05-02 05:58:18,260 | INFO     | fitting pss+swap vs Time
[2026-05-02 07:59:02] 2026-05-02 05:58:18,260 | INFO     | sum of square deviations: 5576683165.5
[2026-05-02 07:59:02] 2026-05-02 05:58:18,263 | INFO     | sum of deviations: 168895213756.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,263 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,263 | INFO     | mean y: 2406538.534351145
[2026-05-02 07:59:02] 2026-05-02 05:58:18,263 | INFO     | intersect: 2406538.534351145
[2026-05-02 07:59:02] 2026-05-02 05:58:18,264 | INFO     | chi2: 11.290838423086353
[2026-05-02 07:59:02] 2026-05-02 05:58:18,264 | INFO     | sum of square deviations: 5263458688.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,267 | INFO     | sum of deviations: 182720285781.00003
[2026-05-02 07:59:02] 2026-05-02 05:58:18,267 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,267 | INFO     | mean y: 2413138.9688715953
[2026-05-02 07:59:02] 2026-05-02 05:58:18,267 | INFO     | intersect: 2413138.9688715953
[2026-05-02 07:59:02] 2026-05-02 05:58:18,268 | INFO     | chi2: 10.628127037703635
[2026-05-02 07:59:02] 2026-05-02 05:58:18,271 | INFO     | current chi2=10.628127037703635 (change=5.869461244150594 %)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,271 | INFO     | right removable region: 256
[2026-05-02 07:59:02] 2026-05-02 05:58:18,272 | INFO     | sum of square deviations: 5263458688.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,274 | INFO     | sum of deviations: 73354909073.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,274 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,274 | INFO     | mean y: 2453057.9221789883
[2026-05-02 07:59:02] 2026-05-02 05:58:18,274 | INFO     | intersect: 2453057.9221789883
[2026-05-02 07:59:02] 2026-05-02 05:58:18,275 | INFO     | chi2: 5.422784386295968
[2026-05-02 07:59:02] 2026-05-02 05:58:18,275 | INFO     | current chi2=5.422784386295968 (change=51.97181836197379 %)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,276 | INFO     | sum of square deviations: 4962187923.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,278 | INFO     | sum of deviations: -7226355727.999998
[2026-05-02 07:59:02] 2026-05-02 05:58:18,278 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,278 | INFO     | mean y: 2493816.6904761903
[2026-05-02 07:59:02] 2026-05-02 05:58:18,278 | INFO     | intersect: 2493816.6904761903
[2026-05-02 07:59:02] 2026-05-02 05:58:18,279 | INFO     | chi2: 1.62561342059697
[2026-05-02 07:59:02] 2026-05-02 05:58:18,279 | INFO     | current chi2=1.62561342059697 (change=70.02253261802015 %)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,279 | INFO     | sum of square deviations: 4672638308.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,282 | INFO     | sum of deviations: -35470012637.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,282 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,282 | INFO     | mean y: 2508570.910931174
[2026-05-02 07:59:02] 2026-05-02 05:58:18,282 | INFO     | intersect: 2508570.910931174
[2026-05-02 07:59:02] 2026-05-02 05:58:18,282 | INFO     | chi2: 0.9220915519925854
[2026-05-02 07:59:02] 2026-05-02 05:58:18,283 | INFO     | current chi2=0.9220915519925854 (change=43.277316715682126 %)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,283 | INFO     | sum of square deviations: 4394577280.5
[2026-05-02 07:59:02] 2026-05-02 05:58:18,285 | INFO     | sum of deviations: -35016289757.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,285 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,286 | INFO     | mean y: 2508295.347107438
[2026-05-02 07:59:02] 2026-05-02 05:58:18,286 | INFO     | intersect: 2508295.347107438
[2026-05-02 07:59:02] 2026-05-02 05:58:18,286 | INFO     | chi2: 0.9092361575145687
[2026-05-02 07:59:02] 2026-05-02 05:58:18,286 | INFO     | current chi2=0.9092361575145687 (change=1.394155976186639 %)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,286 | INFO     | left removable region: 20
[2026-05-02 07:59:02] 2026-05-02 05:58:18,287 | INFO     | sum of square deviations: 4075741535.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,289 | INFO     | sum of deviations: -18411195985.000008
[2026-05-02 07:59:02] 2026-05-02 05:58:18,289 | INFO     | mean x (centered): 0.0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,289 | INFO     | mean y: 2517634.3898305083
[2026-05-02 07:59:02] 2026-05-02 05:58:18,289 | INFO     | intersect: 2517634.3898305083
[2026-05-02 07:59:02] 2026-05-02 05:58:18,290 | INFO     | chi2: 0.12388839861169382
[2026-05-02 07:59:02] 2026-05-02 05:58:18,290 | INFO     | current memory leak: -4.52 B/s (using 236 data points, chi2=0.12)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,291 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,291 | INFO     | ..............................
[2026-05-02 07:59:02] 2026-05-02 05:58:18,291 | INFO     | . Timing measurements:
[2026-05-02 07:59:02] 2026-05-02 05:58:18,291 | INFO     | . get job = 0 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,291 | INFO     | . initial setup = 125 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,291 | INFO     | . payload setup = 194 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,292 | INFO     | . stage-in = 0 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,292 | INFO     | . payload execution = 16096 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,292 | INFO     | . stage-out = 3 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,292 | INFO     | . log creation = 1 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,292 | INFO     | ..............................
[2026-05-02 07:59:02] 2026-05-02 05:58:18,438 | INFO     | 
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | job summary report
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | --------------------------------------------------
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | PanDA job id: 7120398348
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | task id: 49718416
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | errors: (none)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | pilot state: finished 
[2026-05-02 07:59:02] 2026-05-02 05:58:18,439 | INFO     | transexitcode: 0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | exeerrorcode: 0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | exeerrordiag: 
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | exitcode: 0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | exitmsg: OK
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | cpuconsumptiontime: 59969 s
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | nevents: 400
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | neventsw: 0
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | pid: 12747
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | pgrp: 12747
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | corecount: 8
[2026-05-02 07:59:02] 2026-05-02 05:58:18,440 | INFO     | event service: False
[2026-05-02 07:59:02] 2026-05-02 05:58:18,441 | INFO     | sizes: {0: 2275326, 1: 2256427, 2: 2277155, 12: 2277183, 16294: 2308707, 16299: 2317707, 16301: 2317891, 16303: 2318085}
[2026-05-02 07:59:02] 2026-05-02 05:58:18,441 | INFO     | --------------------------------------------------
[2026-05-02 07:59:02] 2026-05-02 05:58:18,441 | INFO     | 
[2026-05-02 07:59:02] 2026-05-02 05:58:18,441 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-05-02 07:59:02] 2026-05-02 05:58:18,866 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,867 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,868 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,868 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 07:59:02] 2026-05-02 05:58:18,868 | INFO     | job 7120398348 has completed (purged errors)
[2026-05-02 07:59:02] 2026-05-02 05:58:18,868 | INFO     | overall cleanup function is called
[2026-05-02 07:59:02] 2026-05-02 05:58:19,876 | INFO     | --- collectZombieJob: --- 10, [12747]
[2026-05-02 07:59:02] 2026-05-02 05:58:19,876 | INFO     | zombie collector waiting for pid 12747
[2026-05-02 07:59:02] 2026-05-02 05:58:19,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 07:59:02] 2026-05-02 05:58:19,876 | INFO     | collected zombie processes
[2026-05-02 07:59:02] 2026-05-02 05:58:19,877 | INFO     | will attempt to kill all subprocesses of pid=12747
[2026-05-02 07:59:02] 2026-05-02 05:58:19,922 | INFO     | process IDs to be killed: [12747] (in reverse order)
[2026-05-02 07:59:02] 2026-05-02 05:58:20,799 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 07:59:02] 2026-05-02 05:58:20,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 07:59:02] 2026-05-02 05:58:20,801 | INFO     | did not find any defunct processes belonging to 12747
[2026-05-02 07:59:02] 2026-05-02 05:58:20,803 | INFO     | did not find any defunct processes belonging to 12747
[2026-05-02 07:59:02] 2026-05-02 05:58:20,803 | INFO     | Ready for new job
[2026-05-02 07:59:02] 2026-05-02 05:58:20,805 | INFO     | ***************************************
[2026-05-02 07:59:02] 2026-05-02 05:58:20,805 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 07:59:02] 2026-05-02 05:58:20,805 | INFO     | ***************************************
[2026-05-02 07:59:02] 2026-05-02 05:58:20,805 | INFO     | 
[2026-05-02 07:59:02] 2026-05-02 05:58:20,806 | INFO     | pilot is running in a VM
[2026-05-02 07:59:02] 2026-05-02 05:58:20,806 | INFO     | architecture information:
[2026-05-02 07:59:02] 2026-05-02 05:58:20,819 | INFO     | executing command: cat /etc/os-release
[2026-05-02 07:59:02] 2026-05-02 05:58:21,124 | INFO     | cat /etc/os-release:
[2026-05-02 07:59:02] NAME="CentOS Linux"
[2026-05-02 07:59:02] VERSION="7 (Core)"
[2026-05-02 07:59:02] ID="centos"
[2026-05-02 07:59:02] ID_LIKE="rhel fedora"
[2026-05-02 07:59:02] VERSION_ID="7"
[2026-05-02 07:59:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 07:59:02] ANSI_COLOR="0;31"
[2026-05-02 07:59:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 07:59:02] HOME_URL="https://www.centos.org/"
[2026-05-02 07:59:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 07:59:02] 
[2026-05-02 07:59:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 07:59:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 07:59:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 07:59:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 07:59:02] 
[2026-05-02 07:59:02] 2026-05-02 05:58:21,125 | INFO     | ***************************************
[2026-05-02 07:59:02] 2026-05-02 05:58:21,628 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-05-02 07:59:02] 2026-05-02 05:58:21,897 | INFO     | sufficient remaining disk space (495892561920 B)
[2026-05-02 07:59:02] 2026-05-02 05:58:21,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 07:59:02] 2026-05-02 05:58:21,897 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 07:59:02] 2026-05-02 05:58:21,897 | INFO     | update_server=False
[2026-05-02 07:59:02] 2026-05-02 05:58:21,897 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 07:59:02] 2026-05-02 05:58:21,932 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 07:59:02] 2026-05-02 05:58:21,932 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 07:59:02] 2026-05-02 05:58:21,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:59:02] 2026-05-02 05:58:21,933 | INFO     | will abort loop
[2026-05-02 07:59:02] 2026-05-02 05:58:21,988 | INFO     | all data control threads have been joined
[2026-05-02 07:59:02] 2026-05-02 05:58:22,469 | INFO     | all payload control threads have been joined
[2026-05-02 07:59:02] 2026-05-02 05:58:22,565 | INFO     | all job control threads have been joined
[2026-05-02 07:59:02] 2026-05-02 05:58:22,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 07:59:02] 2026-05-02 05:58:22,903 | INFO     | [job] retrieve thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:22,935 | INFO     | [payload] failed_post thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:22,938 | INFO     | [job] job monitor thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:22,977 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:22,994 | INFO     | [data] control thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:23,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 07:59:02] 2026-05-02 05:58:23,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:23,059 | INFO     | [data] copytool_in thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:23,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:59:02] 2026-05-02 05:58:23,475 | INFO     | [payload] control thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:23,571 | INFO     | [job] control thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:23,836 | INFO     | [payload] validate_post thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:24,022 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:24,051 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:24,297 | INFO     | [job] validate thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:24,461 | INFO     | [job] queue monitor thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:25,037 | INFO     | [data] copytool_out thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:26,595 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 07:59:02] 2026-05-02 05:58:50,034 | INFO     | [monitor] cgroup control has ended
[2026-05-02 07:59:02] 2026-05-02 05:58:50,093 | INFO     | PID=8293 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-02 07:59:02] 2026-05-02 05:58:50,093 | INFO     | .. there are 2 such processes running
[2026-05-02 07:59:02] 2026-05-02 05:58:50,093 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 07:59:02] 2026-05-02 05:58:50,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 07:59:02] 2026-05-02 05:58:50,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 07:59:02] 2026-05-02 05:58:51,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325014513472)>', '<ExcThread(monitor, started 140324726875904)>']
[2026-05-02 07:59:02] 2026-05-02 05:58:52,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 07:59:02] 2026-05-02 05:58:52,105 | INFO     | [monitor] control thread has ended
[2026-05-02 07:59:02] 2026-05-02 05:58:56,967 | INFO     | all workflow threads have been joined
[2026-05-02 07:59:02] 2026-05-02 05:58:56,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 07:59:02] 2026-05-02 05:58:56,967 | INFO     | traces error code: 0
[2026-05-02 07:59:02] 2026-05-02 05:58:56,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 07:59:02] 2026-05-02 05:58:57,429 [wrapper] ==== pilot stdout END ====
[2026-05-02 07:59:02] 2026-05-02 05:58:57,536 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 07:59:02] 2026-05-02 05:58:57,653 [wrapper] pilotpid: 8293
[2026-05-02 07:59:02] 2026-05-02 05:58:57,761 [wrapper] Pilot exit status: 0
[2026-05-02 07:59:02] 2026-05-02 05:58:58,252 [wrapper] pandaids: 7120398348
[2026-05-02 07:59:02] 2026-05-02 05:58:59,201 [wrapper] cleanup supervisor_pilot 20122 8294
[2026-05-02 07:59:02] 2026-05-02 05:58:59,294 [wrapper] Test setup, not cleaning
[2026-05-02 07:59:02] 2026-05-02 05:58:59,379 [wrapper] apfmon messages muted
[2026-05-02 07:59:02] 2026-05-02 05:58:59,462 [wrapper] ==== wrapper stdout END ====
[2026-05-02 07:59:02] 2026-05-02 05:58:59,544 [wrapper] ==== wrapper stderr END ====
[2026-05-02 07:59:02]  *** Error codes and diagnostics ***
[2026-05-02 07:59:02]     "exeErrorCode": 0,
[2026-05-02 07:59:02]     "pilotErrorCode": 0,
[2026-05-02 07:59:02]  *** Listing of results directory ***
[2026-05-02 07:59:02] total 631720
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc    683926 May  1 14:40 pilot3.tar.gz
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc      5631 May  1 14:45 queuedata.json
[2026-05-02 07:59:02] -rwx------. 1 boinc boinc     36322 May  1 14:45 runpilot2-wrapper.sh
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc       100 May  2 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 07:59:02] -rwxr-xr-x. 1 boinc boinc      7986 May  2 03:19 run_atlas
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc       105 May  2 03:19 job.xml
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc      6308 May  2 03:19 init_data.xml
[2026-05-02 07:59:02] -rw-r--r--. 2 boinc boinc 444234662 May  2 03:19 EVNT.46373187._000136.pool.root.1
[2026-05-02 07:59:02] -rw-r--r--. 2 boinc boinc     15667 May  2 03:19 start_atlas.sh
[2026-05-02 07:59:02] drwxrwx--x. 2 boinc boinc        68 May  2 03:19 shared
[2026-05-02 07:59:02] -rw-r--r--. 2 boinc boinc    697431 May  2 03:19 input.tar.gz
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc         0 May  2 03:19 boinc_lockfile
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc      2595 May  2 03:19 pandaJob.out
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc       415 May  2 03:26 workernode_map.json
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc   1002984 May  2 03:26 agis_schedconf.cvmfs.json
[2026-05-02 07:59:02] drwx------. 5 boinc boinc      4096 May  2 03:26 pilot3
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc 194651054 May  2 07:56 HITS.49718416._017926.pool.root.1
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc       490 May  2 07:56 boinc_task_state.xml
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc        95 May  2 07:57 pilot_heartbeat.json
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc      1023 May  2 07:58 memory_monitor_summary.json
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc   1508687 May  2 07:58 agis_ddmendpoints.agis.ALL.json
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc    420727 May  2 07:58 log.49718416._017926.job.log.tgz.1
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc      6335 May  2 07:58 heartbeat_new.json
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc      6226 May  2 07:58 heartbeat.json
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc      8192 May  2 07:58 boinc_mmap_file
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc        28 May  2 07:58 wrapper_checkpoint.txt
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc      5069 May  2 07:58 pilotlog.txt
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc   1515004 May  2 07:58 log.49718416._017926.job.log.1
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc       357 May  2 07:59 output.list
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc       410 May  2 07:59 runtime_log
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc   1955840 May  2 07:59 result.tar.gz
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc      8455 May  2 07:59 runtime_log.err
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc       655 May  2 07:59 a069f85bc5e4.diag
[2026-05-02 07:59:02] -rw-r--r--. 1 boinc boinc     20489 May  2 07:59 stderr.txt
[2026-05-02 07:59:02] HITS file was successfully produced:
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc 194651054 May  2 07:56 shared/HITS.pool.root.1
[2026-05-02 07:59:02]  *** Contents of shared directory: ***
[2026-05-02 07:59:02] total 626528
[2026-05-02 07:59:02] -rw-r--r--. 2 boinc boinc 444234662 May  2 03:19 ATLAS.root_0
[2026-05-02 07:59:02] -rw-r--r--. 2 boinc boinc     15667 May  2 03:19 start_atlas.sh
[2026-05-02 07:59:02] -rw-r--r--. 2 boinc boinc    697431 May  2 03:19 input.tar.gz
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc 194651054 May  2 07:56 HITS.pool.root.1
[2026-05-02 07:59:02] -rw-------. 1 boinc boinc   1955840 May  2 07:59 result.tar.gz
07:59:03 (4293): run_atlas exited; CPU time 60125.741572
07:59:03 (4293): called boinc_finish(0)

</stderr_txt>
]]>

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