Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:26:55 (451388): wrapper (7.7.26015): starting
11:26:55 (451388): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 11:26:55] Arguments: --nthreads 8
[2026-05-01 11:26:55] Threads: 8
[2026-05-01 11:26:55] Checking for CVMFS
[2026-05-01 11:26:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 11:26:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 11:26:56] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 11:26:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 11:26:56] 2.13.3.0 11767 1532 121924 159100 2 63 28826429 32935937 19649 16776704 0 5859853 99.694 7872697 17697 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-01 11:26:56] CVMFS is ok
[2026-05-01 11:26:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 11:26:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 11:26:56] Further information can be found at the LHC@home message board.
[2026-05-01 11:26:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 11:26:56] Checking for apptainer binary...
[2026-05-01 11:26:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 11:26:56] Running /usr/bin/apptainer --version
[2026-05-01 11:26:56] apptainer version 1.4.5-3.el9
[2026-05-01 11:26:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 11:26:56] c6-6-39-3.aglt2.org
[2026-05-01 11:26:56] apptainer works
[2026-05-01 11:26:56] Set ATHENA_PROC_NUMBER=8
[2026-05-01 11:26:56] Set ATHENA_CORE_NUMBER=8
[2026-05-01 11:26:56] Starting ATLAS job with PandaID=7120464114
[2026-05-01 11:26:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 13:33:52]  *** The last 200 lines of the pilot log: ***
[2026-05-01 13:33:52] 2026-05-01 17:32:57,991 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-01 13:33:52] 2026-05-01 17:32:57,991 | INFO     | this job has now completed (state=finished)
[2026-05-01 13:33:52] 2026-05-01 17:32:57,992 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 13:33:52] 2026-05-01 17:32:57,992 | INFO     | log transfer has been attempted: DONE
[2026-05-01 13:33:52] 2026-05-01 17:32:57,992 | INFO     | job 7120464114 has finished - writing final server update
[2026-05-01 13:33:52] 2026-05-01 17:32:57,992 | INFO     | total number of processed events: 400 (read)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,017 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7120464114/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,018 | INFO     | extracted standard info from prmon json
[2026-05-01 13:33:52] 2026-05-01 17:32:58,018 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 13:33:52] 2026-05-01 17:32:58,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 13:33:52] 2026-05-01 17:32:58,019 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 13:33:52] 2026-05-01 17:32:58,021 | INFO     | fitting pss+swap vs Time
[2026-05-01 13:33:52] 2026-05-01 17:32:58,021 | INFO     | sum of square deviations: 576977408.9268268
[2026-05-01 13:33:52] 2026-05-01 17:32:58,025 | INFO     | sum of deviations: -10593289700.536589
[2026-05-01 13:33:52] 2026-05-01 17:32:58,025 | INFO     | mean x (centered): 0.0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,025 | INFO     | mean y: 2566556.512195122
[2026-05-01 13:33:52] 2026-05-01 17:32:58,025 | INFO     | intersect: 2566556.512195122
[2026-05-01 13:33:52] 2026-05-01 17:32:58,025 | INFO     | chi2: 3.040595773437189
[2026-05-01 13:33:52] 2026-05-01 17:32:58,026 | INFO     | sum of square deviations: 509432871.42372864
[2026-05-01 13:33:52] 2026-05-01 17:32:58,026 | INFO     | sum of deviations: -1207200143.915249
[2026-05-01 13:33:52] 2026-05-01 17:32:58,026 | INFO     | mean x (centered): 0.0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,026 | INFO     | mean y: 2587131.805084746
[2026-05-01 13:33:52] 2026-05-01 17:32:58,026 | INFO     | intersect: 2587131.805084746
[2026-05-01 13:33:52] 2026-05-01 17:32:58,027 | INFO     | chi2: 2.269479022536817
[2026-05-01 13:33:52] 2026-05-01 17:32:58,027 | INFO     | current chi2=2.269479022536817 (change=25.36071245105615 %)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,027 | INFO     | sum of square deviations: 447376808.92035353
[2026-05-01 13:33:52] 2026-05-01 17:32:58,027 | INFO     | sum of deviations: -285330814.0176943
[2026-05-01 13:33:52] 2026-05-01 17:32:58,027 | INFO     | mean x (centered): 0.0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,028 | INFO     | mean y: 2589399.6725663715
[2026-05-01 13:33:52] 2026-05-01 17:32:58,028 | INFO     | intersect: 2589399.6725663715
[2026-05-01 13:33:52] 2026-05-01 17:32:58,028 | INFO     | chi2: 2.2736481824662302
[2026-05-01 13:33:52] 2026-05-01 17:32:58,028 | INFO     | current chi2=2.2736481824662302 (change=-0.1837055944563472 %)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,032 | INFO     | right removable region: 112
[2026-05-01 13:33:52] 2026-05-01 17:32:58,033 | INFO     | sum of square deviations: 509431041.42372864
[2026-05-01 13:33:52] 2026-05-01 17:32:58,033 | INFO     | sum of deviations: -35087952967.81357
[2026-05-01 13:33:52] 2026-05-01 17:32:58,033 | INFO     | mean x (centered): 0.0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,033 | INFO     | mean y: 2621087.2711864407
[2026-05-01 13:33:52] 2026-05-01 17:32:58,034 | INFO     | intersect: 2621087.2711864407
[2026-05-01 13:33:52] 2026-05-01 17:32:58,034 | INFO     | chi2: 1.0220972362873795
[2026-05-01 13:33:52] 2026-05-01 17:32:58,034 | INFO     | current chi2=1.0220972362873795 (change=66.3849681954939 %)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,034 | INFO     | sum of square deviations: 447373148.92035353
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | sum of deviations: -35245239894.185844
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | mean x (centered): 0.0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | mean y: 2621315.0619469024
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | intersect: 2621315.0619469024
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | chi2: 0.9770200512543441
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | current chi2=0.9770200512543441 (change=4.410263860684306 %)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | left removable region: 10
[2026-05-01 13:33:52] 2026-05-01 17:32:58,035 | INFO     | sum of square deviations: 329023175.41176385
[2026-05-01 13:33:52] 2026-05-01 17:32:58,036 | INFO     | sum of deviations: -23465335033.470585
[2026-05-01 13:33:52] 2026-05-01 17:32:58,036 | INFO     | mean x (centered): 0.0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,036 | INFO     | mean y: 2652853.3235294116
[2026-05-01 13:33:52] 2026-05-01 17:32:58,036 | INFO     | intersect: 2652853.3235294116
[2026-05-01 13:33:52] 2026-05-01 17:32:58,036 | INFO     | chi2: 0.13466629967363677
[2026-05-01 13:33:52] 2026-05-01 17:32:58,041 | INFO     | current memory leak: -71.32 B/s (using 102 data points, chi2=0.13)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,041 | INFO     | could have reported an average CPU frequency of 2851 MHz (8 samples)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,041 | INFO     | ..............................
[2026-05-01 13:33:52] 2026-05-01 17:32:58,041 | INFO     | . Timing measurements:
[2026-05-01 13:33:52] 2026-05-01 17:32:58,041 | INFO     | . get job = 0 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | . initial setup = 12 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | . payload setup = 25 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | . stage-in = 0 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | . payload execution = 7487 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | . stage-out = 2 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | . log creation = 0 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,042 | INFO     | ..............................
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | 
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | job summary report
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | --------------------------------------------------
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | PanDA job id: 7120464114
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | task id: 49718416
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | errors: (none)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | pilot state: finished 
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | transexitcode: 0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | exeerrorcode: 0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,189 | INFO     | exeerrordiag: 
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | exitcode: 0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | exitmsg: OK
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | cpuconsumptiontime: 39879 s
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | nevents: 400
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | neventsw: 0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | pid: 460379
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | pgrp: 460379
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | corecount: 8
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | event service: False
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | sizes: {0: 2275700, 1: 2277156, 7517: 2304642, 7521: 2313640, 7522: 2313696, 7525: 2313890}
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | --------------------------------------------------
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | 
[2026-05-01 13:33:52] 2026-05-01 17:32:58,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-01 13:33:52] 2026-05-01 17:32:58,262 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,262 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,262 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,262 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,263 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,264 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 13:33:52] 2026-05-01 17:32:58,264 | INFO     | job 7120464114 has completed (purged errors)
[2026-05-01 13:33:52] 2026-05-01 17:32:58,264 | INFO     | overall cleanup function is called
[2026-05-01 13:33:52] 2026-05-01 17:32:59,279 | INFO     | --- collectZombieJob: --- 10, [460379]
[2026-05-01 13:33:52] 2026-05-01 17:32:59,280 | INFO     | zombie collector waiting for pid 460379
[2026-05-01 13:33:52] 2026-05-01 17:32:59,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 13:33:52] 2026-05-01 17:32:59,280 | INFO     | collected zombie processes
[2026-05-01 13:33:52] 2026-05-01 17:32:59,280 | INFO     | will attempt to kill all subprocesses of pid=460379
[2026-05-01 13:33:52] 2026-05-01 17:33:00,108 | INFO     | process IDs to be killed: [460379] (in reverse order)
[2026-05-01 13:33:52] 2026-05-01 17:33:00,269 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 13:33:52] 2026-05-01 17:33:00,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 13:33:52] 2026-05-01 17:33:00,283 | INFO     | did not find any defunct processes belonging to 460379
[2026-05-01 13:33:52] 2026-05-01 17:33:00,295 | INFO     | did not find any defunct processes belonging to 460379
[2026-05-01 13:33:52] 2026-05-01 17:33:00,295 | INFO     | Ready for new job
[2026-05-01 13:33:52] 2026-05-01 17:33:00,297 | INFO     | ***************************************
[2026-05-01 13:33:52] 2026-05-01 17:33:00,299 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 13:33:52] 2026-05-01 17:33:00,299 | INFO     | ***************************************
[2026-05-01 13:33:52] 2026-05-01 17:33:00,299 | INFO     | 
[2026-05-01 13:33:52] 2026-05-01 17:33:00,302 | INFO     | architecture information:
[2026-05-01 13:33:52] 2026-05-01 17:33:00,302 | INFO     | executing command: cat /etc/os-release
[2026-05-01 13:33:52] 2026-05-01 17:33:00,323 | INFO     | cat /etc/os-release:
[2026-05-01 13:33:52] NAME="CentOS Linux"
[2026-05-01 13:33:52] VERSION="7 (Core)"
[2026-05-01 13:33:52] ID="centos"
[2026-05-01 13:33:52] ID_LIKE="rhel fedora"
[2026-05-01 13:33:52] VERSION_ID="7"
[2026-05-01 13:33:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 13:33:52] ANSI_COLOR="0;31"
[2026-05-01 13:33:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 13:33:52] HOME_URL="https://www.centos.org/"
[2026-05-01 13:33:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 13:33:52] 
[2026-05-01 13:33:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 13:33:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 13:33:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 13:33:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 13:33:52] 
[2026-05-01 13:33:52] 2026-05-01 17:33:00,324 | INFO     | ***************************************
[2026-05-01 13:33:52] 2026-05-01 17:33:00,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-01 13:33:52] 2026-05-01 17:33:00,892 | INFO     | sufficient remaining disk space (72859254784 B)
[2026-05-01 13:33:52] 2026-05-01 17:33:00,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 13:33:52] 2026-05-01 17:33:00,893 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 13:33:52] 2026-05-01 17:33:00,893 | INFO     | update_server=False
[2026-05-01 13:33:52] 2026-05-01 17:33:00,893 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 13:33:52] 2026-05-01 17:33:00,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 13:33:52] 2026-05-01 17:33:00,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 13:33:52] 2026-05-01 17:33:00,895 | INFO     | aborting loop
[2026-05-01 13:33:52] 2026-05-01 17:33:01,056 | INFO     | all job control threads have been joined
[2026-05-01 13:33:52] 2026-05-01 17:33:01,261 | INFO     | all payload control threads have been joined
[2026-05-01 13:33:52] 2026-05-01 17:33:01,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 13:33:52] 2026-05-01 17:33:01,839 | INFO     | all data control threads have been joined
[2026-05-01 13:33:52] 2026-05-01 17:33:01,899 | INFO     | [job] retrieve thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:01,901 | INFO     | [job] job monitor thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:01,914 | INFO     | [data] copytool_in thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,023 | INFO     | [payload] validate_post thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,062 | INFO     | [job] control thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,266 | INFO     | [payload] control thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,290 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,316 | INFO     | [job] validate thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,543 | INFO     | [payload] failed_post thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,776 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,811 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,845 | INFO     | [data] control thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:02,900 | INFO     | [data] copytool_out thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:03,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:03,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 13:33:52] 2026-05-01 17:33:04,210 | INFO     | [job] queue monitor thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:05,293 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 13:33:52] 2026-05-01 17:33:31,169 | INFO     | PID=455168 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 13:33:52] 2026-05-01 17:33:31,169 | INFO     | .. there are 25 such processes running
[2026-05-01 13:33:52] 2026-05-01 17:33:31,169 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 13:33:52] 2026-05-01 17:33:31,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 13:33:52] 2026-05-01 17:33:31,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 13:33:52] 2026-05-01 17:33:44,708 | INFO     | [monitor] cgroup control has ended
[2026-05-01 13:33:52] 2026-05-01 17:33:45,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744676325184)>', '<ExcThread(monitor, started 139744319096576)>']
[2026-05-01 13:33:52] 2026-05-01 17:33:46,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 13:33:52] 2026-05-01 17:33:46,279 | INFO     | [monitor] control thread has ended
[2026-05-01 13:33:52] 2026-05-01 17:33:50,956 | INFO     | all workflow threads have been joined
[2026-05-01 13:33:52] 2026-05-01 17:33:50,957 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 13:33:52] 2026-05-01 17:33:50,957 | INFO     | traces error code: 0
[2026-05-01 13:33:52] 2026-05-01 17:33:50,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 13:33:52] 2026-05-01 17:33:51,408 [wrapper] ==== pilot stdout END ====
[2026-05-01 13:33:52] 2026-05-01 17:33:51,423 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 13:33:52] 2026-05-01 17:33:51,441 [wrapper] pilotpid: 455168
[2026-05-01 13:33:52] 2026-05-01 17:33:51,458 [wrapper] Pilot exit status: 0
[2026-05-01 13:33:52] 2026-05-01 17:33:51,560 [wrapper] pandaids: 7120464114
[2026-05-01 13:33:52] 2026-05-01 17:33:51,680 [wrapper] cleanup supervisor_pilot  797191 455169
[2026-05-01 13:33:52] 2026-05-01 17:33:51,695 [wrapper] Test setup, not cleaning
[2026-05-01 13:33:52] 2026-05-01 17:33:51,727 [wrapper] apfmon messages muted
[2026-05-01 13:33:52] 2026-05-01 17:33:51,750 [wrapper] ==== wrapper stdout END ====
[2026-05-01 13:33:52] 2026-05-01 17:33:51,777 [wrapper] ==== wrapper stderr END ====
[2026-05-01 13:33:52]  *** Error codes and diagnostics ***
[2026-05-01 13:33:52]     "exeErrorCode": 0,
[2026-05-01 13:33:52]     "pilotErrorCode": 0,
[2026-05-01 13:33:52]  *** Listing of results directory ***
[2026-05-01 13:33:52] total 629628
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas    683926 May  1 08:40 pilot3.tar.gz
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas      5631 May  1 08:41 queuedata.json
[2026-05-01 13:33:52] -rwx------. 1 boincer umatlas     36322 May  1 08:41 runpilot2-wrapper.sh
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas       100 May  1 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 13:33:52] -rwxr-xr-x. 1 boincer umatlas      7986 May  1 11:26 run_atlas
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas       105 May  1 11:26 job.xml
[2026-05-01 13:33:52] -rw-r--r--. 2 boincer umatlas 443278288 May  1 11:26 EVNT.46373187._000150.pool.root.1
[2026-05-01 13:33:52] -rw-r--r--. 2 boincer umatlas     15667 May  1 11:26 start_atlas.sh
[2026-05-01 13:33:52] drwxrwx--x. 2 boincer umatlas      4096 May  1 11:26 shared
[2026-05-01 13:33:52] -rw-r--r--. 2 boincer umatlas    697429 May  1 11:26 input.tar.gz
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas         0 May  1 11:26 boinc_lockfile
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas      2596 May  1 11:26 pandaJob.out
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas        57 May  1 11:26 setup.sh.local
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas   1003083 May  1 11:27 agis_schedconf.cvmfs.json
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas   1508687 May  1 11:27 agis_ddmendpoints.agis.ALL.json
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas       440 May  1 11:27 workernode_map.json
[2026-05-01 13:33:52] drwx------. 5 boincer umatlas      4096 May  1 11:27 pilot3
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas      6754 May  1 13:29 init_data.xml
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas 195201078 May  1 13:31 HITS.49718416._018643.pool.root.1
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas       488 May  1 13:31 boinc_task_state.xml
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas        95 May  1 13:32 pilot_heartbeat.json
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas      1041 May  1 13:32 memory_monitor_summary.json
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas    361751 May  1 13:32 log.49718416._018643.job.log.tgz.1
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas      6415 May  1 13:32 heartbeat_new.json
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas      6306 May  1 13:32 heartbeat.json
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas        27 May  1 13:33 wrapper_checkpoint.txt
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas      4822 May  1 13:33 pilotlog.txt
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas    696331 May  1 13:33 log.49718416._018643.job.log.1
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas      8192 May  1 13:33 boinc_mmap_file
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas       357 May  1 13:33 output.list
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas       410 May  1 13:33 runtime_log
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas   1075200 May  1 13:33 result.tar.gz
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas      8969 May  1 13:33 runtime_log.err
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas       653 May  1 13:33 9f8e2c6e4f28.diag
[2026-05-01 13:33:52] -rw-r--r--. 1 boincer umatlas     21026 May  1 13:33 stderr.txt
[2026-05-01 13:33:52] HITS file was successfully produced:
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas 195201078 May  1 13:31 shared/HITS.pool.root.1
[2026-05-01 13:33:52]  *** Contents of shared directory: ***
[2026-05-01 13:33:52] total 625276
[2026-05-01 13:33:52] -rw-r--r--. 2 boincer umatlas 443278288 May  1 11:26 ATLAS.root_0
[2026-05-01 13:33:52] -rw-r--r--. 2 boincer umatlas     15667 May  1 11:26 start_atlas.sh
[2026-05-01 13:33:52] -rw-r--r--. 2 boincer umatlas    697429 May  1 11:26 input.tar.gz
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas 195201078 May  1 13:31 HITS.pool.root.1
[2026-05-01 13:33:52] -rw-------. 1 boincer umatlas   1075200 May  1 13:33 result.tar.gz
13:34:13 (451388): run_atlas exited; CPU time 40094.514645
13:34:13 (451388): called boinc_finish(0)

</stderr_txt>
]]>

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