Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:16:07 (1017809): wrapper (7.7.26015): starting
02:16:07 (1017809): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 02:16:07] Arguments: --nthreads 4
[2026-05-04 02:16:07] Threads: 4
[2026-05-04 02:16:07] Checking for CVMFS
[2026-05-04 02:16:07] No cvmfs_config command found, will try listing directly
[2026-05-04 02:16:07] CVMFS is ok
[2026-05-04 02:16:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 02:16:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 02:16:07] Further information can be found at the LHC@home message board.
[2026-05-04 02:16:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 02:16:07] Checking for apptainer binary...
[2026-05-04 02:16:07] which: no apptainer in ((null))
[2026-05-04 02:16:07] apptainer is not installed, using version from CVMFS
[2026-05-04 02:16:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 02:16:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-04 02:16:07] apptainer works
[2026-05-04 02:16:07] Set ATHENA_PROC_NUMBER=4
[2026-05-04 02:16:07] Set ATHENA_CORE_NUMBER=4
[2026-05-04 02:16:07] Starting ATLAS job with PandaID=7124771778
[2026-05-04 02:16:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 06:40:06]  *** The last 200 lines of the pilot log: ***
[2026-05-04 06:40:06] 2026-05-04 04:39:09,755 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot112/slots/1/workernode_map.json
[2026-05-04 06:40:06] 2026-05-04 04:39:09,755 | INFO     | this job has now completed (state=finished)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,755 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,755 | INFO     | log transfer has been attempted: DONE
[2026-05-04 06:40:06] 2026-05-04 04:39:09,756 | INFO     | job 7124771778 has finished - writing final server update
[2026-05-04 06:40:06] 2026-05-04 04:39:09,756 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_816081/.job.ad'
[2026-05-04 06:40:06] 2026-05-04 04:39:09,756 | INFO     | total number of processed events: 400 (read)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,783 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7124771778/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,783 | INFO     | extracted standard info from prmon json
[2026-05-04 06:40:06] 2026-05-04 04:39:09,783 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 06:40:06] 2026-05-04 04:39:09,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 06:40:06] 2026-05-04 04:39:09,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 06:40:06] 2026-05-04 04:39:09,789 | INFO     | fitting pss+swap vs Time
[2026-05-04 06:40:06] 2026-05-04 04:39:09,789 | INFO     | sum of square deviations: 5325139844.5
[2026-05-04 06:40:06] 2026-05-04 04:39:09,791 | INFO     | sum of deviations: 36314291829.5
[2026-05-04 06:40:06] 2026-05-04 04:39:09,791 | INFO     | mean x (centered): 0.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,791 | INFO     | mean y: 2339650.4534883723
[2026-05-04 06:40:06] 2026-05-04 04:39:09,791 | INFO     | intersect: 2339650.4534883723
[2026-05-04 06:40:06] 2026-05-04 04:39:09,792 | INFO     | chi2: 1.440883880937783
[2026-05-04 06:40:06] 2026-05-04 04:39:09,792 | INFO     | sum of square deviations: 5021496942.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,794 | INFO     | sum of deviations: 35290461882.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,795 | INFO     | mean x (centered): 0.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,795 | INFO     | mean y: 2339136.1818181816
[2026-05-04 06:40:06] 2026-05-04 04:39:09,795 | INFO     | intersect: 2339136.1818181816
[2026-05-04 06:40:06] 2026-05-04 04:39:09,795 | INFO     | chi2: 1.4414683935883827
[2026-05-04 06:40:06] 2026-05-04 04:39:09,796 | INFO     | current chi2=1.4414683935883827 (change=-0.040566256471634844 %)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,796 | INFO     | right removable region: 252
[2026-05-04 06:40:06] 2026-05-04 04:39:09,796 | INFO     | sum of square deviations: 5021496942.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,798 | INFO     | sum of deviations: -922416501.9999986
[2026-05-04 06:40:06] 2026-05-04 04:39:09,798 | INFO     | mean x (centered): 0.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,798 | INFO     | mean y: 2358188.0513833994
[2026-05-04 06:40:06] 2026-05-04 04:39:09,798 | INFO     | intersect: 2358188.0513833994
[2026-05-04 06:40:06] 2026-05-04 04:39:09,799 | INFO     | chi2: 0.005682706372348728
[2026-05-04 06:40:06] 2026-05-04 04:39:09,799 | INFO     | current chi2=0.005682706372348728 (change=99.60560969225013 %)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,799 | INFO     | sum of square deviations: 4729621702.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,801 | INFO     | sum of deviations: -252292309.50000015
[2026-05-04 06:40:06] 2026-05-04 04:39:09,801 | INFO     | mean x (centered): 0.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,801 | INFO     | mean y: 2357834.3024193547
[2026-05-04 06:40:06] 2026-05-04 04:39:09,801 | INFO     | intersect: 2357834.3024193547
[2026-05-04 06:40:06] 2026-05-04 04:39:09,802 | INFO     | chi2: 0.0051899999679979715
[2026-05-04 06:40:06] 2026-05-04 04:39:09,802 | INFO     | current chi2=0.0051899999679979715 (change=8.670277365520745 %)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,802 | INFO     | left removable region: 10
[2026-05-04 06:40:06] 2026-05-04 04:39:09,802 | INFO     | sum of square deviations: 4394577280.5
[2026-05-04 06:40:06] 2026-05-04 04:39:09,804 | INFO     | sum of deviations: -607928226.5000007
[2026-05-04 06:40:06] 2026-05-04 04:39:09,804 | INFO     | mean x (centered): 0.0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,804 | INFO     | mean y: 2357640.012396694
[2026-05-04 06:40:06] 2026-05-04 04:39:09,804 | INFO     | intersect: 2357640.012396694
[2026-05-04 06:40:06] 2026-05-04 04:39:09,805 | INFO     | chi2: 0.005108934705070122
[2026-05-04 06:40:06] 2026-05-04 04:39:09,805 | INFO     | current memory leak: -0.14 B/s (using 242 data points, chi2=0.01)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,805 | INFO     | could have reported an average CPU frequency of 2692 MHz (12 samples)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,805 | INFO     | ..............................
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . Timing measurements:
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . get job = 0 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . initial setup = 9 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . payload setup = 16 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . stage-in = 0 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . payload execution = 15723 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . stage-out = 1 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | . log creation = 0 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,806 | INFO     | ..............................
[2026-05-04 06:40:06] 2026-05-04 04:39:09,873 | INFO     | 
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | job summary report
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | --------------------------------------------------
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | PanDA job id: 7124771778
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | task id: 49863851
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | errors: (none)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 06:40:06] 2026-05-04 04:39:09,874 | INFO     | pilot state: finished 
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | transexitcode: 0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | exeerrorcode: 0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | exeerrordiag: 
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | exitcode: 0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | exitmsg: OK
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | cpuconsumptiontime: 59800 s
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | nevents: 400
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | neventsw: 0
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | pid: 1027126
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | pgrp: 1027126
[2026-05-04 06:40:06] 2026-05-04 04:39:09,875 | INFO     | corecount: 4
[2026-05-04 06:40:06] 2026-05-04 04:39:09,876 | INFO     | event service: False
[2026-05-04 06:40:06] 2026-05-04 04:39:09,876 | INFO     | sizes: {0: 2275292, 1: 2277177, 12: 2277177, 15743: 2309354, 15745: 2318570}
[2026-05-04 06:40:06] 2026-05-04 04:39:09,876 | INFO     | --------------------------------------------------
[2026-05-04 06:40:06] 2026-05-04 04:39:09,876 | INFO     | 
[2026-05-04 06:40:06] 2026-05-04 04:39:09,876 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-05-04 06:40:06] 2026-05-04 04:39:09,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | job 7124771778 has completed (purged errors)
[2026-05-04 06:40:06] 2026-05-04 04:39:09,902 | INFO     | overall cleanup function is called
[2026-05-04 06:40:06] 2026-05-04 04:39:10,910 | INFO     | --- collectZombieJob: --- 10, [1027126]
[2026-05-04 06:40:06] 2026-05-04 04:39:10,911 | INFO     | zombie collector waiting for pid 1027126
[2026-05-04 06:40:06] 2026-05-04 04:39:10,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 06:40:06] 2026-05-04 04:39:10,911 | INFO     | collected zombie processes
[2026-05-04 06:40:06] 2026-05-04 04:39:10,911 | INFO     | will attempt to kill all subprocesses of pid=1027126
[2026-05-04 06:40:06] 2026-05-04 04:39:11,612 | INFO     | process IDs to be killed: [1027126] (in reverse order)
[2026-05-04 06:40:06] 2026-05-04 04:39:11,945 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 06:40:06] 2026-05-04 04:39:11,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 06:40:06] 2026-05-04 04:39:11,977 | INFO     | did not find any defunct processes belonging to 1027126
[2026-05-04 06:40:06] 2026-05-04 04:39:12,003 | INFO     | did not find any defunct processes belonging to 1027126
[2026-05-04 06:40:06] 2026-05-04 04:39:12,003 | INFO     | Ready for new job
[2026-05-04 06:40:06] 2026-05-04 04:39:12,005 | INFO     | ***************************************
[2026-05-04 06:40:06] 2026-05-04 04:39:12,006 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 06:40:06] 2026-05-04 04:39:12,006 | INFO     | ***************************************
[2026-05-04 06:40:06] 2026-05-04 04:39:12,006 | INFO     | 
[2026-05-04 06:40:06] 2026-05-04 04:39:12,014 | INFO     | architecture information:
[2026-05-04 06:40:06] 2026-05-04 04:39:12,015 | INFO     | executing command: cat /etc/os-release
[2026-05-04 06:40:06] 2026-05-04 04:39:12,037 | INFO     | cat /etc/os-release:
[2026-05-04 06:40:06] NAME="CentOS Linux"
[2026-05-04 06:40:06] VERSION="7 (Core)"
[2026-05-04 06:40:06] ID="centos"
[2026-05-04 06:40:06] ID_LIKE="rhel fedora"
[2026-05-04 06:40:06] VERSION_ID="7"
[2026-05-04 06:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 06:40:06] ANSI_COLOR="0;31"
[2026-05-04 06:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 06:40:06] HOME_URL="https://www.centos.org/"
[2026-05-04 06:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 06:40:06] 
[2026-05-04 06:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 06:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 06:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 06:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 06:40:06] 
[2026-05-04 06:40:06] 2026-05-04 04:39:12,038 | INFO     | ***************************************
[2026-05-04 06:40:06] 2026-05-04 04:39:12,540 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-05-04 06:40:06] 2026-05-04 04:39:12,563 | INFO     | sufficient remaining disk space (225550794752 B)
[2026-05-04 06:40:06] 2026-05-04 04:39:12,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 06:40:06] 2026-05-04 04:39:12,564 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 06:40:06] 2026-05-04 04:39:12,564 | INFO     | update_server=False
[2026-05-04 06:40:06] 2026-05-04 04:39:12,564 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 06:40:06] 2026-05-04 04:39:12,636 | INFO     | all data control threads have been joined
[2026-05-04 06:40:06] 2026-05-04 04:39:12,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 06:40:06] 2026-05-04 04:39:12,875 | INFO     | all job control threads have been joined
[2026-05-04 06:40:06] 2026-05-04 04:39:13,569 | INFO     | [job] retrieve thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:13,642 | INFO     | [data] control thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:13,802 | INFO     | [job] validate thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:13,844 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:13,880 | INFO     | [job] control thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:13,984 | INFO     | all payload control threads have been joined
[2026-05-04 06:40:06] 2026-05-04 04:39:14,069 | INFO     | [payload] failed_post thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:14,163 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:14,362 | INFO     | [payload] validate_post thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:14,655 | INFO     | [data] copytool_in thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:14,662 | INFO     | [data] copytool_out thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:14,772 | WARNING  | process 1027126 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 06:40:06] 2026-05-04 04:39:14,805 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:14,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 06:40:06] 2026-05-04 04:39:14,990 | INFO     | [payload] control thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:15,356 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 06:40:06] 2026-05-04 04:39:15,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 06:40:06] 2026-05-04 04:39:15,889 | INFO     | [job] queue monitor thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:16,046 | INFO     | number of running child processes to parent process 1027126: 1
[2026-05-04 06:40:06] 2026-05-04 04:39:16,046 | INFO     | maximum number of monitored processes: 6
[2026-05-04 06:40:06] 2026-05-04 04:39:16,046 | INFO     | aborting job monitoring since job object (job id=7124771778) has expired
[2026-05-04 06:40:06] 2026-05-04 04:39:16,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 06:40:06] 2026-05-04 04:39:16,046 | INFO     | will abort loop
[2026-05-04 06:40:06] 2026-05-04 04:39:17,052 | INFO     | [job] job monitor thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:19,773 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:22,844 | INFO     | job.realtimelogging is not enabled
[2026-05-04 06:40:06] 2026-05-04 04:39:23,849 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 06:40:06] 2026-05-04 04:39:43,599 | INFO     | PID=1021893 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-04 06:40:06] 2026-05-04 04:39:43,599 | INFO     | .. there are 25 such processes running
[2026-05-04 06:40:06] 2026-05-04 04:39:43,601 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 06:40:06] 2026-05-04 04:39:43,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 06:40:06] 2026-05-04 04:39:43,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 06:40:06] 2026-05-04 04:39:59,115 | INFO     | [monitor] cgroup control has ended
[2026-05-04 06:40:06] 2026-05-04 04:40:01,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23127938402112)>', '<ExcThread(monitor, started 23127620790016)>']
[2026-05-04 06:40:06] 2026-05-04 04:40:01,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 06:40:06] 2026-05-04 04:40:01,691 | INFO     | [monitor] control thread has ended
[2026-05-04 06:40:06] 2026-05-04 04:40:06,176 | INFO     | all workflow threads have been joined
[2026-05-04 06:40:06] 2026-05-04 04:40:06,176 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 06:40:06] 2026-05-04 04:40:06,176 | INFO     | traces error code: 0
[2026-05-04 06:40:06] 2026-05-04 04:40:06,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 06:40:06] 2026-05-04 04:40:06,395 [wrapper] ==== pilot stdout END ====
[2026-05-04 06:40:06] 2026-05-04 04:40:06,400 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 06:40:06] 2026-05-04 04:40:06,403 [wrapper] pilotpid: 1021893
[2026-05-04 06:40:06] 2026-05-04 04:40:06,408 [wrapper] Pilot exit status: 0
[2026-05-04 06:40:06] 2026-05-04 04:40:06,426 [wrapper] pandaids: 7124771778
[2026-05-04 06:40:06] 2026-05-04 04:40:06,633 [wrapper] cleanup supervisor_pilot 1704732 1021894
[2026-05-04 06:40:06] 2026-05-04 04:40:06,637 [wrapper] Test setup, not cleaning
[2026-05-04 06:40:06] 2026-05-04 04:40:06,642 [wrapper] apfmon messages muted
[2026-05-04 06:40:06] 2026-05-04 04:40:06,645 [wrapper] ==== wrapper stdout END ====
[2026-05-04 06:40:06] 2026-05-04 04:40:06,649 [wrapper] ==== wrapper stderr END ====
[2026-05-04 06:40:06]  *** Error codes and diagnostics ***
[2026-05-04 06:40:06]     "exeErrorCode": 0,
[2026-05-04 06:40:06]     "pilotErrorCode": 0,
[2026-05-04 06:40:06]  *** Listing of results directory ***
[2026-05-04 06:40:06] total 473620
[2026-05-04 06:40:06] -rwx------. 1 boinc boinc     36322 May  1 14:40 runpilot2-wrapper.sh
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc      5631 May  1 14:40 queuedata.json
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc    683926 May  1 14:40 pilot3.tar.gz
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc       100 May  4 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 06:40:06] -rwxr-xr-x. 1 boinc boinc      7986 May  4 02:16 run_atlas
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc       105 May  4 02:16 job.xml
[2026-05-04 06:40:06] -rw-r--r--. 2 boinc boinc 257865796 May  4 02:16 EVNT.49863848._000203.pool.root.1
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc      6541 May  4 02:16 init_data.xml
[2026-05-04 06:40:06] -rw-r--r--. 2 boinc boinc     15667 May  4 02:16 start_atlas.sh
[2026-05-04 06:40:06] drwxrwx--x. 2 boinc boinc      4096 May  4 02:16 shared
[2026-05-04 06:40:06] -rw-r--r--. 2 boinc boinc    697436 May  4 02:16 input.tar.gz
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc         0 May  4 02:16 boinc_lockfile
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc      2652 May  4 02:16 pandaJob.out
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc   1003017 May  4 02:16 agis_schedconf.cvmfs.json
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc       441 May  4 02:16 workernode_map.json
[2026-05-04 06:40:06] drwx------. 5 boinc boinc      4096 May  4 02:16 pilot3
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc 219366728 May  4 06:38 HITS.49863851._006085.pool.root.1
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc       489 May  4 06:38 boinc_task_state.xml
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc      1029 May  4 06:39 memory_monitor_summary.json
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc   1508687 May  4 06:39 agis_ddmendpoints.agis.ALL.json
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc    363716 May  4 06:39 log.49863851._006085.job.log.tgz.1
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc      6378 May  4 06:39 heartbeat_new.json
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc      6269 May  4 06:39 heartbeat.json
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc      8192 May  4 06:39 boinc_mmap_file
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc        28 May  4 06:39 wrapper_checkpoint.txt
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc        95 May  4 06:39 pilot_heartbeat.json
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc      5440 May  4 06:40 pilotlog.txt
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc   1446359 May  4 06:40 log.49863851._006085.job.log.1
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc       357 May  4 06:40 output.list
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc       410 May  4 06:40 runtime_log
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc   1822720 May  4 06:40 result.tar.gz
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc      8845 May  4 06:40 runtime_log.err
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc       666 May  4 06:40 9f2a05199a62.diag
[2026-05-04 06:40:06] -rw-r--r--. 1 boinc boinc     21056 May  4 06:40 stderr.txt
[2026-05-04 06:40:06] HITS file was successfully produced:
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc 219366728 May  4 06:38 shared/HITS.pool.root.1
[2026-05-04 06:40:06]  *** Contents of shared directory: ***
[2026-05-04 06:40:06] total 468540
[2026-05-04 06:40:06] -rw-r--r--. 2 boinc boinc 257865796 May  4 02:16 ATLAS.root_0
[2026-05-04 06:40:06] -rw-r--r--. 2 boinc boinc     15667 May  4 02:16 start_atlas.sh
[2026-05-04 06:40:06] -rw-r--r--. 2 boinc boinc    697436 May  4 02:16 input.tar.gz
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc 219366728 May  4 06:38 HITS.pool.root.1
[2026-05-04 06:40:06] -rw-------. 1 boinc boinc   1822720 May  4 06:40 result.tar.gz
06:40:08 (1017809): run_atlas exited; CPU time 60730.871698
06:40:08 (1017809): called boinc_finish(0)

</stderr_txt>
]]>

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