Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-01 16:04:03 (2588): vboxwrapper version 26210
2026-05-01 16:04:03 (2588): BOINC client version: 8.2.9
2026-05-01 16:04:03 (2588): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-05-01 16:04:03 (2588): Detected: Sandbox Configuration Enabled
2026-05-01 16:04:03 (2588): Successfully copied 'init_data.xml' to the shared directory.
2026-05-01 16:04:03 (2588): Create VM. (boinc_792ef2b7382ea841, slot#1)
2026-05-01 16:04:03 (2588): Setting Memory Size for VM. (4800MB)
2026-05-01 16:04:03 (2588): Setting CPU Count for VM. (8)
2026-05-01 16:04:03 (2588): Setting Chipset Options for VM.
2026-05-01 16:04:03 (2588): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-01 16:04:03 (2588): Setting Boot Options for VM.
2026-05-01 16:04:03 (2588): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-01 16:04:04 (2588): Enabling VM Network Access.
2026-05-01 16:04:04 (2588): Disabling USB Support for VM.
2026-05-01 16:04:04 (2588): Disabling COM Port Support for VM.
2026-05-01 16:04:04 (2588): Disabling Audio Support for VM.
2026-05-01 16:04:04 (2588): Disabling Clipboard Support for VM.
2026-05-01 16:04:04 (2588): Disabling Drag and Drop Support for VM.
2026-05-01 16:04:04 (2588): Adding storage controller(s) to VM.
2026-05-01 16:04:04 (2588): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-01 16:04:04 (2588): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-01 16:04:04 (2588): forwarding host port 52194 to guest port 80
2026-05-01 16:04:04 (2588): Enabling remote desktop for VM.
2026-05-01 16:04:04 (2588): Required extension pack not installed, remote desktop not enabled.
2026-05-01 16:04:04 (2588): Enabling shared directory for VM.
2026-05-01 16:04:04 (2588): Starting VM using VBoxManage interface. (boinc_792ef2b7382ea841, slot#1)
2026-05-01 16:04:08 (2588): Successfully started VM. (PID = '2645')
2026-05-01 16:04:08 (2588): Reporting VM Process ID to BOINC.
2026-05-01 16:04:08 (2588): Guest Log: BIOS: VirtualBox 7.1.10
2026-05-01 16:04:08 (2588): Guest Log: CPUID EDX: 0x178bfbff
2026-05-01 16:04:08 (2588): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-01 16:04:08 (2588): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-01 16:04:09 (2588): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-01 16:04:09 (2588): Detected: Web Application Enabled (http://localhost:52194)
2026-05-01 16:04:09 (2588): Preference change detected
2026-05-01 16:04:09 (2588): Setting CPU throttle for VM. (5%)
2026-05-01 16:04:09 (2588): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-01 16:04:10 (2588): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-01 16:04:10 (2588): Guest Log: BIOS: Booting from Hard Disk...
2026-05-01 16:04:15 (2588): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-01 16:04:15 (2588): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-01 16:04:15 (2588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-01 16:05:31 (2588): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-01 16:05:31 (2588): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-01 16:07:42 (2588): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.000178 main     Log opened 2026-05-01T14:07:39.703600000Z
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.002646 main     OS Product: Linux
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.002897 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.002952 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.003013 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.003015 main     Process ID: 1402
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.003015 main     Package type: LINUX_64BITS_GENERIC
2026-05-01 16:07:42 (2588): Guest Log: 00:00:00.102724 main     5.2.32 r132073 started. Verbose level = 0
2026-05-01 16:07:44 (2588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-01 16:07:44 (2588): Guest Log: [INFO] Mounting shared directory
2026-05-01 16:07:46 (2588): Guest Log: [INFO] Checking for init_data.xml
2026-05-01 16:08:35 (2588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-01 16:08:36 (2588): Guest Log: [INFO] Detected branch: prod
2026-05-01 16:08:38 (2588): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-01 16:08:38 (2588): Guest Log: Copying input files
2026-05-01 16:09:28 (2588): Guest Log: Copied input files into RunAtlas.
2026-05-01 16:09:29 (2588): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-01 16:09:30 (2588): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-01 16:09:30 (2588): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-01 16:09:30 (2588): Guest Log: Further information can be found at the LHC@home message board.
2026-05-01 16:09:56 (2588): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-01 16:10:02 (2588): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-01 16:10:02 (2588): Guest Log: 2.6.3.0 1696 1 30140 159097 3 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-01 16:10:18 (2588): Guest Log: copied the webapp to /var/www
2026-05-01 16:10:19 (2588): Guest Log: ATHENA_PROC_NUMBER=8
2026-05-01 16:10:19 (2588): Guest Log: ATHENA_CORE_NUMBER=8
2026-05-01 16:10:21 (2588): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-01 16:10:23 (2588): Guest Log:  *** Starting ATLAS job. (PandaID=7120349382 taskID=49263200) ***
2026-05-01 17:43:49 (2588): Status Report: Elapsed Time: '6000.000000'
2026-05-01 17:43:49 (2588): Status Report: CPU Time: '2274.650000'
2026-05-01 19:23:33 (2588): Status Report: Elapsed Time: '12000.000000'
2026-05-01 19:23:33 (2588): Status Report: CPU Time: '15704.810000'
2026-05-01 21:03:19 (2588): Status Report: Elapsed Time: '18000.000000'
2026-05-01 21:03:19 (2588): Status Report: CPU Time: '34226.460000'
2026-05-01 21:46:42 (2588): Guest Log:  *** Job finished ***
2026-05-01 21:46:42 (2588): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:44:57,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:03,392 | INFO     | [monitor] cgroup control has ended
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:03,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502229428032)>', '<ExcThread(monitor, started 140501491623680)>']
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:04,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:04,756 | INFO     | [monitor] control thread has ended
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:08,817 | INFO     | all workflow threads have been joined
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:08,817 | INFO     | end of generic workflow (traces error code: 0)
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:08,817 | INFO     | traces error code: 0
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:08,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:09,911 [wrapper] supervise_pilot (15 min periods counter: 22)
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:11,372 [wrapper] ==== pilot stdout END ====
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:12,741 [wrapper] ==== wrapper stdout RESUME ====
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:13,054 [wrapper] pilotpid: 6370
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:13,572 [wrapper] Pilot exit status: 0
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:15,031 [wrapper] pandaids: 7120349382
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:16,991 [wrapper] cleanup supervisor_pilot 31892 6371
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:17,400 [wrapper] Test setup, not cleaning
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:17,605 [wrapper] apfmon messages muted
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:17,912 [wrapper] ==== wrapper stdout END ====
2026-05-01 21:46:42 (2588): Guest Log: 2026-05-01 19:45:18,438 [wrapper] ==== wrapper stderr END ====
2026-05-01 21:46:42 (2588): Guest Log:  *** Error codes and diagnostics ***
2026-05-01 21:46:42 (2588): Guest Log:     "exeErrorCode": 0,
2026-05-01 21:46:42 (2588): Guest Log:     "pilotErrorCode": 0,
2026-05-01 21:46:42 (2588): Guest Log:  *** Listing of results directory ***
2026-05-01 21:46:43 (2588): Guest Log: total 200716
2026-05-01 21:46:43 (2588): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May  1 11:26 pilot3.tar.gz
2026-05-01 21:46:43 (2588): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May  1 11:32 queuedata.json
2026-05-01 21:46:43 (2588): Guest Log: -rwx------. 1 atlas atlas     36322 May  1 11:32 runpilot2-wrapper.sh
2026-05-01 21:46:43 (2588): Guest Log: -rw-r-----. 1 atlas atlas     15667 May  1 14:08 start_atlas.sh
2026-05-01 21:46:43 (2588): Guest Log: -rw-r-----. 1 atlas atlas    697431 May  1 14:08 input.tar.gz
2026-05-01 21:46:43 (2588): Guest Log: -rw-r--r--. 1 atlas atlas      9990 May  1 14:08 init_data.xml
2026-05-01 21:46:43 (2588): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  1 14:09 EVNT.49263198._001005.pool.root.1 -> /data/./ATLAS.root_0
2026-05-01 21:46:43 (2588): Guest Log: -rw-r--r--. 1 atlas atlas      2574 May  1 14:10 pandaJob.out
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas       411 May  1 14:30 workernode_map.json
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas   1003083 May  1 14:30 agis_schedconf.cvmfs.json
2026-05-01 21:46:43 (2588): Guest Log: drwx------. 5 atlas atlas      4096 May  1 14:30 pilot3
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas 197787708 May  1 19:39 HITS.49263200._080304.pool.root.1
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas      1046 May  1 19:43 memory_monitor_summary.json
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas   1508687 May  1 19:43 agis_ddmendpoints.agis.ALL.json
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas    411807 May  1 19:43 log.49263200._080304.job.log.tgz.1
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas      6370 May  1 19:44 heartbeat_new.json
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas      6261 May  1 19:44 heartbeat.json
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas        96 May  1 19:44 pilot_heartbeat.json
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas      4805 May  1 19:45 pilotlog.txt
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas   1428389 May  1 19:45 log.49263200._080304.job.log.1
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas       357 May  1 19:45 output.list
2026-05-01 21:46:43 (2588): Guest Log: -rw-r--r--. 1 atlas atlas       410 May  1 19:45 runtime_log
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas   1853440 May  1 19:45 result.tar.gz
2026-05-01 21:46:43 (2588): Guest Log: -rw-r--r--. 1 atlas atlas      8437 May  1 19:45 runtime_log.err
2026-05-01 21:46:43 (2588): Guest Log: -rw-------. 1 atlas atlas       683 May  1 19:45 8f4acc006312.diag
2026-05-01 21:46:43 (2588): Guest Log: Looking for outputfile HITS.49263200._080304.pool.root.1
2026-05-01 21:46:43 (2588): Guest Log: HITS file was successfully produced
2026-05-01 21:46:44 (2588): Guest Log: -rw-------. 1 atlas atlas 197787708 May  1 19:39 /home/atlas/RunAtlas/HITS.49263200._080304.pool.root.1
2026-05-01 21:46:48 (2588): Guest Log: Successfully finished the ATLAS job!
2026-05-01 21:46:48 (2588): Guest Log: Copying the results back to the shared directory!
2026-05-01 21:46:51 (2588): Guest Log:  *** Contents of shared directory: ***
2026-05-01 21:46:52 (2588): Guest Log: total 222584
2026-05-01 21:46:52 (2588): Guest Log: -rw-rw----. 1 root root 225337878 May  1 14:04 ATLAS.root_0
2026-05-01 21:46:52 (2588): Guest Log: -rw-rw-r--. 1 root root      9990 May  1 14:04 init_data.xml
2026-05-01 21:46:52 (2588): Guest Log: -rw-rw----. 1 root root    697431 May  1 14:04 input.tar.gz
2026-05-01 21:46:52 (2588): Guest Log: -rw-r--r--. 1 root root   1853440 May  1  2026 result.tar.gz
2026-05-01 21:46:52 (2588): Guest Log: -rw-rw----. 1 root root     15667 May  1 14:04 start_atlas.sh
2026-05-01 21:46:53 (2588): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-01 21:46:54 (2588): VM Completion File Detected.
2026-05-01 21:46:54 (2588): Powering off VM.
2026-05-01 21:46:55 (2588): Successfully stopped VM.
2026-05-01 21:46:55 (2588): Deregistering VM. (boinc_792ef2b7382ea841, slot#1)
2026-05-01 21:46:55 (2588): Removing network bandwidth throttle group from VM.
2026-05-01 21:46:55 (2588): Removing VM from VirtualBox.
2026-05-01 21:47:00 (2588): called boinc_finish(0)

</stderr_txt>
]]>

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