Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:00:13 (2022668): wrapper (7.7.26015): starting
23:00:13 (2022668): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 23:00:13] Arguments: --nthreads 4
[2026-05-04 23:00:13] Threads: 4
[2026-05-04 23:00:13] Checking for CVMFS
[2026-05-04 23:00:13] No cvmfs_config command found, will try listing directly
[2026-05-04 23:00:13] CVMFS is ok
[2026-05-04 23:00:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 23:00:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 23:00:13] Further information can be found at the LHC@home message board.
[2026-05-04 23:00:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 23:00:13] Checking for apptainer binary...
[2026-05-04 23:00:13] which: no apptainer in ((null))
[2026-05-04 23:00:13] apptainer is not installed, using version from CVMFS
[2026-05-04 23:00:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 23:00:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-04 23:00:13] apptainer works
[2026-05-04 23:00:13] Set ATHENA_PROC_NUMBER=4
[2026-05-04 23:00:13] Set ATHENA_CORE_NUMBER=4
[2026-05-04 23:00:13] Starting ATLAS job with PandaID=7120016489
[2026-05-04 23:00:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 01:58:00]  *** The last 200 lines of the pilot log: ***
[2026-05-05 01:58:00] 2026-05-04 23:57:04,784 | INFO     | chi2: 1.3865985530345795
[2026-05-05 01:58:00] 2026-05-04 23:57:04,789 | INFO     | sum of square deviations: 1470248962.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,790 | INFO     | sum of deviations: 25502470598.5
[2026-05-05 01:58:00] 2026-05-04 23:57:04,790 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,790 | INFO     | mean y: 2314759.636904762
[2026-05-05 01:58:00] 2026-05-04 23:57:04,791 | INFO     | intersect: 2314759.636904762
[2026-05-05 01:58:00] 2026-05-04 23:57:04,791 | INFO     | chi2: 1.3875351622587637
[2026-05-05 01:58:00] 2026-05-04 23:57:04,791 | INFO     | current chi2=1.3875351622587637 (change=-0.06754725238494476 %)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,791 | INFO     | right removable region: 167
[2026-05-05 01:58:00] 2026-05-04 23:57:04,791 | INFO     | sum of square deviations: 1470248962.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,792 | INFO     | sum of deviations: 3127405675.5
[2026-05-05 01:58:00] 2026-05-04 23:57:04,792 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,792 | INFO     | mean y: 2341919.9821428573
[2026-05-05 01:58:00] 2026-05-04 23:57:04,793 | INFO     | intersect: 2341919.9821428573
[2026-05-05 01:58:00] 2026-05-04 23:57:04,793 | INFO     | chi2: 0.0055263626865763
[2026-05-05 01:58:00] 2026-05-04 23:57:04,793 | INFO     | current chi2=0.0055263626865763 (change=99.60144465213224 %)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,793 | INFO     | sum of square deviations: 1342841922.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,798 | INFO     | sum of deviations: 2328564407.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,798 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,798 | INFO     | mean y: 2342851.644171779
[2026-05-05 01:58:00] 2026-05-04 23:57:04,799 | INFO     | intersect: 2342851.644171779
[2026-05-05 01:58:00] 2026-05-04 23:57:04,799 | INFO     | chi2: 0.0018946574782343346
[2026-05-05 01:58:00] 2026-05-04 23:57:04,799 | INFO     | current chi2=0.0018946574782343346 (change=65.71601276122333 %)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,799 | INFO     | sum of square deviations: 1223016419.5
[2026-05-05 01:58:00] 2026-05-04 23:57:04,800 | INFO     | sum of deviations: 2900004080.5
[2026-05-05 01:58:00] 2026-05-04 23:57:04,800 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,800 | INFO     | mean y: 2342122.575949367
[2026-05-05 01:58:00] 2026-05-04 23:57:04,801 | INFO     | intersect: 2342122.575949367
[2026-05-05 01:58:00] 2026-05-04 23:57:04,801 | INFO     | chi2: 0.0008556513122177389
[2026-05-05 01:58:00] 2026-05-04 23:57:04,801 | INFO     | current chi2=0.0008556513122177389 (change=54.83873354168819 %)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,801 | INFO     | sum of square deviations: 1110539892.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,802 | INFO     | sum of deviations: 2813808427.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,802 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,802 | INFO     | mean y: 2342251.156862745
[2026-05-05 01:58:00] 2026-05-04 23:57:04,802 | INFO     | intersect: 2342251.156862745
[2026-05-05 01:58:00] 2026-05-04 23:57:04,803 | INFO     | chi2: 0.00030631898546625784
[2026-05-05 01:58:00] 2026-05-04 23:57:04,803 | INFO     | current chi2=0.00030631898546625784 (change=64.20048902019234 %)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,803 | INFO     | sum of square deviations: 1005179777.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,804 | INFO     | sum of deviations: 2386859392.5000005
[2026-05-05 01:58:00] 2026-05-04 23:57:04,804 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,804 | INFO     | mean y: 2342869.2905405406
[2026-05-05 01:58:00] 2026-05-04 23:57:04,804 | INFO     | intersect: 2342869.2905405406
[2026-05-05 01:58:00] 2026-05-04 23:57:04,804 | INFO     | chi2: 0.0002570008285784957
[2026-05-05 01:58:00] 2026-05-04 23:57:04,805 | INFO     | current chi2=0.0002570008285784957 (change=16.100261239992488 %)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,805 | INFO     | left removable region: 25
[2026-05-05 01:58:00] 2026-05-04 23:57:04,805 | INFO     | sum of square deviations: 887813855.5
[2026-05-05 01:58:00] 2026-05-04 23:57:04,806 | INFO     | sum of deviations: 2074143350.0000002
[2026-05-05 01:58:00] 2026-05-04 23:57:04,806 | INFO     | mean x (centered): 0.0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,806 | INFO     | mean y: 2342381.4507042253
[2026-05-05 01:58:00] 2026-05-04 23:57:04,806 | INFO     | intersect: 2342381.4507042253
[2026-05-05 01:58:00] 2026-05-04 23:57:04,806 | INFO     | chi2: 0.00025496783834452383
[2026-05-05 01:58:00] 2026-05-04 23:57:04,806 | INFO     | current memory leak: 2.34 B/s (using 142 data points, chi2=0.00)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,807 | INFO     | could have reported an average CPU frequency of 2682 MHz (9 samples)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,807 | INFO     | ..............................
[2026-05-05 01:58:00] 2026-05-04 23:57:04,807 | INFO     | . Timing measurements:
[2026-05-05 01:58:00] 2026-05-04 23:57:04,807 | INFO     | . get job = 0 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,807 | INFO     | . initial setup = 8 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,807 | INFO     | . payload setup = 15 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,808 | INFO     | . stage-in = 0 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,808 | INFO     | . payload execution = 10552 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,808 | INFO     | . stage-out = 0 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,808 | INFO     | . log creation = 0 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,808 | INFO     | ..............................
[2026-05-05 01:58:00] 2026-05-04 23:57:04,996 | INFO     | 
[2026-05-05 01:58:00] 2026-05-04 23:57:04,996 | INFO     | job summary report
[2026-05-05 01:58:00] 2026-05-04 23:57:04,996 | INFO     | --------------------------------------------------
[2026-05-05 01:58:00] 2026-05-04 23:57:04,996 | INFO     | PanDA job id: 7120016489
[2026-05-05 01:58:00] 2026-05-04 23:57:04,996 | INFO     | task id: 49718416
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | errors: (none)
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | pilot state: finished 
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | transexitcode: 0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | exeerrorcode: 0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | exeerrordiag: 
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | exitcode: 0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | exitmsg: OK
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | cpuconsumptiontime: 39459 s
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | nevents: 400
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | neventsw: 0
[2026-05-05 01:58:00] 2026-05-04 23:57:04,997 | INFO     | pid: 2032286
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | pgrp: 2032286
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | corecount: 4
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | event service: False
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | sizes: {0: 2270590, 1: 2272248, 11: 2272248, 10572: 2301628, 10574: 2310650, 10576: 2310706, 10577: 2311092}
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | --------------------------------------------------
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | 
[2026-05-05 01:58:00] 2026-05-04 23:57:04,998 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-05-05 01:58:00] 2026-05-04 23:57:05,062 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,062 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,062 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,062 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | job 7120016489 has completed (purged errors)
[2026-05-05 01:58:00] 2026-05-04 23:57:05,064 | INFO     | overall cleanup function is called
[2026-05-05 01:58:00] 2026-05-04 23:57:05,094 | INFO     | number of running child processes to parent process 2032286: 1
[2026-05-05 01:58:00] 2026-05-04 23:57:05,095 | INFO     | maximum number of monitored processes: 6
[2026-05-05 01:58:00] 2026-05-04 23:57:05,095 | INFO     | aborting job monitoring since job object (job id=7120016489) has expired
[2026-05-05 01:58:00] 2026-05-04 23:57:06,078 | INFO     | --- collectZombieJob: --- 10, [2032286]
[2026-05-05 01:58:00] 2026-05-04 23:57:06,078 | INFO     | zombie collector waiting for pid 2032286
[2026-05-05 01:58:00] 2026-05-04 23:57:06,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 01:58:00] 2026-05-04 23:57:06,079 | INFO     | collected zombie processes
[2026-05-05 01:58:00] 2026-05-04 23:57:06,079 | INFO     | will attempt to kill all subprocesses of pid=2032286
[2026-05-05 01:58:00] 2026-05-04 23:57:06,780 | INFO     | process IDs to be killed: [2032286] (in reverse order)
[2026-05-05 01:58:00] 2026-05-04 23:57:07,149 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 01:58:00] 2026-05-04 23:57:07,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 01:58:00] 2026-05-04 23:57:07,184 | INFO     | did not find any defunct processes belonging to 2032286
[2026-05-05 01:58:00] 2026-05-04 23:57:07,221 | INFO     | did not find any defunct processes belonging to 2032286
[2026-05-05 01:58:00] 2026-05-04 23:57:07,221 | INFO     | Ready for new job
[2026-05-05 01:58:00] 2026-05-04 23:57:07,223 | INFO     | ***************************************
[2026-05-05 01:58:00] 2026-05-04 23:57:07,223 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 01:58:00] 2026-05-04 23:57:07,223 | INFO     | ***************************************
[2026-05-05 01:58:00] 2026-05-04 23:57:07,223 | INFO     | 
[2026-05-05 01:58:00] 2026-05-04 23:57:07,230 | INFO     | architecture information:
[2026-05-05 01:58:00] 2026-05-04 23:57:07,234 | INFO     | executing command: cat /etc/os-release
[2026-05-05 01:58:00] 2026-05-04 23:57:07,271 | INFO     | cat /etc/os-release:
[2026-05-05 01:58:00] NAME="CentOS Linux"
[2026-05-05 01:58:00] VERSION="7 (Core)"
[2026-05-05 01:58:00] ID="centos"
[2026-05-05 01:58:00] ID_LIKE="rhel fedora"
[2026-05-05 01:58:00] VERSION_ID="7"
[2026-05-05 01:58:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 01:58:00] ANSI_COLOR="0;31"
[2026-05-05 01:58:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 01:58:00] HOME_URL="https://www.centos.org/"
[2026-05-05 01:58:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 01:58:00] 
[2026-05-05 01:58:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 01:58:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 01:58:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 01:58:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 01:58:00] 
[2026-05-05 01:58:00] 2026-05-04 23:57:07,271 | INFO     | ***************************************
[2026-05-05 01:58:00] 2026-05-04 23:57:07,774 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-05-05 01:58:00] 2026-05-04 23:57:07,806 | INFO     | sufficient remaining disk space (259743809536 B)
[2026-05-05 01:58:00] 2026-05-04 23:57:07,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 01:58:00] 2026-05-04 23:57:07,807 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 01:58:00] 2026-05-04 23:57:07,807 | INFO     | update_server=False
[2026-05-05 01:58:00] 2026-05-04 23:57:07,807 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 01:58:00] 2026-05-04 23:57:07,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 01:58:00] 2026-05-04 23:57:07,877 | INFO     | all data control threads have been joined
[2026-05-05 01:58:00] 2026-05-04 23:57:07,965 | INFO     | all payload control threads have been joined
[2026-05-05 01:58:00] 2026-05-04 23:57:08,522 | INFO     | all job control threads have been joined
[2026-05-05 01:58:00] 2026-05-04 23:57:08,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:58:00] 2026-05-04 23:57:08,604 | INFO     | aborting loop
[2026-05-05 01:58:00] 2026-05-04 23:57:08,811 | INFO     | [job] retrieve thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:08,882 | INFO     | [data] control thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:08,970 | INFO     | [payload] control thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,169 | INFO     | [payload] failed_post thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,310 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,325 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,473 | INFO     | [payload] validate_post thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,527 | INFO     | [job] control thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,586 | INFO     | [data] copytool_in thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 01:58:00] 2026-05-04 23:57:09,604 | INFO     | [job] validate thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,608 | INFO     | [job] job monitor thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:09,812 | INFO     | [data] copytool_out thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:10,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:58:00] 2026-05-04 23:57:10,072 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:11,010 | INFO     | [job] queue monitor thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:13,595 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 01:58:00] 2026-05-04 23:57:39,000 | INFO     | PID=2026879 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 01:58:00] 2026-05-04 23:57:39,000 | INFO     | .. there are 25 such processes running
[2026-05-05 01:58:00] 2026-05-04 23:57:39,002 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 01:58:00] 2026-05-04 23:57:39,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 01:58:00] 2026-05-04 23:57:39,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 01:58:00] 2026-05-04 23:57:54,148 | INFO     | [monitor] cgroup control has ended
[2026-05-05 01:58:00] 2026-05-04 23:57:55,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23327360980800)>', '<ExcThread(monitor, started 23327128442624)>']
[2026-05-05 01:58:00] 2026-05-04 23:57:56,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 01:58:00] 2026-05-04 23:57:56,088 | INFO     | [monitor] control thread has ended
[2026-05-05 01:58:00] 2026-05-04 23:58:00,278 | INFO     | all workflow threads have been joined
[2026-05-05 01:58:00] 2026-05-04 23:58:00,279 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 01:58:00] 2026-05-04 23:58:00,279 | INFO     | traces error code: 0
[2026-05-05 01:58:00] 2026-05-04 23:58:00,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 01:58:00] 2026-05-04 23:58:00,415 [wrapper] ==== pilot stdout END ====
[2026-05-05 01:58:00] 2026-05-04 23:58:00,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 01:58:00] 2026-05-04 23:58:00,453 [wrapper] pilotpid: 2026879
[2026-05-05 01:58:00] 2026-05-04 23:58:00,458 [wrapper] Pilot exit status: 0
[2026-05-05 01:58:00] 2026-05-04 23:58:00,508 [wrapper] pandaids: 7120016489
[2026-05-05 01:58:00] 2026-05-04 23:58:00,728 [wrapper] cleanup supervisor_pilot 2482301 2026880
[2026-05-05 01:58:00] 2026-05-04 23:58:00,733 [wrapper] Test setup, not cleaning
[2026-05-05 01:58:00] 2026-05-04 23:58:00,737 [wrapper] apfmon messages muted
[2026-05-05 01:58:00] 2026-05-04 23:58:00,741 [wrapper] ==== wrapper stdout END ====
[2026-05-05 01:58:00] 2026-05-04 23:58:00,745 [wrapper] ==== wrapper stderr END ====
[2026-05-05 01:58:00]  *** Error codes and diagnostics ***
[2026-05-05 01:58:00]     "exeErrorCode": 0,
[2026-05-05 01:58:00]     "pilotErrorCode": 0,
[2026-05-05 01:58:00]  *** Listing of results directory ***
[2026-05-05 01:58:00] total 632296
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc    683926 May  1 12:19 pilot3.tar.gz
[2026-05-05 01:58:00] -rwx------. 1 boinc boinc     36322 May  1 12:20 runpilot2-wrapper.sh
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc      5631 May  1 12:20 queuedata.json
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc       100 May  4 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 01:58:00] -rwxr-xr-x. 1 boinc boinc      7986 May  4 23:00 run_atlas
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc       105 May  4 23:00 job.xml
[2026-05-05 01:58:00] -rw-r--r--. 2 boinc boinc 442575709 May  4 23:00 EVNT.46373187._000092.pool.root.1
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc      6542 May  4 23:00 init_data.xml
[2026-05-05 01:58:00] -rw-r--r--. 2 boinc boinc     15667 May  4 23:00 start_atlas.sh
[2026-05-05 01:58:00] drwxrwx--x. 2 boinc boinc      4096 May  4 23:00 shared
[2026-05-05 01:58:00] -rw-r--r--. 2 boinc boinc    697431 May  4 23:00 input.tar.gz
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc         0 May  4 23:00 boinc_lockfile
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc      2596 May  4 23:00 pandaJob.out
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc   1002597 May  4 23:00 agis_schedconf.cvmfs.json
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc   1505918 May  4 23:00 agis_ddmendpoints.agis.ALL.json
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc       443 May  4 23:00 workernode_map.json
[2026-05-05 01:58:00] drwx------. 5 boinc boinc      4096 May  4 23:00 pilot3
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc 198129684 May  5 01:56 HITS.49718416._015742.pool.root.1
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc       488 May  5 01:56 boinc_task_state.xml
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc      1027 May  5 01:56 memory_monitor_summary.json
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc    328262 May  5 01:57 log.49718416._015742.job.log.tgz.1
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc      6370 May  5 01:57 heartbeat_new.json
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc      6261 May  5 01:57 heartbeat.json
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc        27 May  5 01:57 wrapper_checkpoint.txt
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc      8192 May  5 01:57 boinc_mmap_file
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc        95 May  5 01:57 pilot_heartbeat.json
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc      4835 May  5 01:58 pilotlog.txt
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc    987747 May  5 01:58 log.49718416._015742.job.log.1
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc       357 May  5 01:58 output.list
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc       410 May  5 01:58 runtime_log
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc   1331200 May  5 01:58 result.tar.gz
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc      8845 May  5 01:58 runtime_log.err
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc       665 May  5 01:58 7e64564f8d25.diag
[2026-05-05 01:58:00] -rw-r--r--. 1 boinc boinc     20660 May  5 01:58 stderr.txt
[2026-05-05 01:58:00] HITS file was successfully produced:
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc 198129684 May  5 01:56 shared/HITS.pool.root.1
[2026-05-05 01:58:00]  *** Contents of shared directory: ***
[2026-05-05 01:58:00] total 627700
[2026-05-05 01:58:00] -rw-r--r--. 2 boinc boinc 442575709 May  4 23:00 ATLAS.root_0
[2026-05-05 01:58:00] -rw-r--r--. 2 boinc boinc     15667 May  4 23:00 start_atlas.sh
[2026-05-05 01:58:00] -rw-r--r--. 2 boinc boinc    697431 May  4 23:00 input.tar.gz
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc 198129684 May  5 01:56 HITS.pool.root.1
[2026-05-05 01:58:00] -rw-------. 1 boinc boinc   1331200 May  5 01:58 result.tar.gz
01:58:02 (2022668): run_atlas exited; CPU time 40082.261110
01:58:02 (2022668): called boinc_finish(0)

</stderr_txt>
]]>

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