Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:49:34 (2738381): wrapper (7.7.26015): starting
04:49:34 (2738381): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 04:49:34] Arguments: --nthreads 4
[2026-05-04 04:49:34] Threads: 4
[2026-05-04 04:49:34] Checking for CVMFS
[2026-05-04 04:49:34] No cvmfs_config command found, will try listing directly
[2026-05-04 04:49:34] CVMFS is ok
[2026-05-04 04:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 04:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 04:49:34] Further information can be found at the LHC@home message board.
[2026-05-04 04:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 04:49:34] Checking for apptainer binary...
[2026-05-04 04:49:34] which: no apptainer in ((null))
[2026-05-04 04:49:34] apptainer is not installed, using version from CVMFS
[2026-05-04 04:49:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 04:49:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-04 04:49:34] apptainer works
[2026-05-04 04:49:34] Set ATHENA_PROC_NUMBER=4
[2026-05-04 04:49:34] Set ATHENA_CORE_NUMBER=4
[2026-05-04 04:49:34] Starting ATLAS job with PandaID=7119931613
[2026-05-04 04:49:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:09:05 (2924529): wrapper (7.7.26015): starting
05:09:05 (2924529): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 05:09:05] Arguments: --nthreads 4
[2026-05-04 05:09:05] Threads: 4
[2026-05-04 05:09:05] This job has been restarted, cleaning up previous attempt
[2026-05-04 05:09:05] Checking for CVMFS
[2026-05-04 05:09:05] No cvmfs_config command found, will try listing directly
[2026-05-04 05:09:05] CVMFS is ok
[2026-05-04 05:09:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 05:09:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 05:09:05] Further information can be found at the LHC@home message board.
[2026-05-04 05:09:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 05:09:05] Checking for apptainer binary...
[2026-05-04 05:09:05] which: no apptainer in ((null))
[2026-05-04 05:09:05] apptainer is not installed, using version from CVMFS
[2026-05-04 05:09:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 05:09:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-04 05:09:05] apptainer works
[2026-05-04 05:09:05] Set ATHENA_PROC_NUMBER=4
[2026-05-04 05:09:05] Set ATHENA_CORE_NUMBER=4
[2026-05-04 05:09:05] Starting ATLAS job with PandaID=7119931613
[2026-05-04 05:09:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 08:12:01]  *** The last 200 lines of the pilot log: ***
[2026-05-04 08:12:01] 2026-05-04 06:11:27,109 | INFO     | log transfer has been attempted: DONE
[2026-05-04 08:12:01] 2026-05-04 06:11:27,109 | INFO     | job 7119931613 has finished - writing final server update
[2026-05-04 08:12:01] 2026-05-04 06:11:27,109 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2886549/.job.ad'
[2026-05-04 08:12:01] 2026-05-04 06:11:27,110 | INFO     | total number of processed events: 400 (read)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,134 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7119931613/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,135 | INFO     | extracted standard info from prmon json
[2026-05-04 08:12:01] 2026-05-04 06:11:27,135 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 08:12:01] 2026-05-04 06:11:27,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 08:12:01] 2026-05-04 06:11:27,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 08:12:01] 2026-05-04 06:11:27,139 | INFO     | fitting pss+swap vs Time
[2026-05-04 08:12:01] 2026-05-04 06:11:27,139 | INFO     | sum of square deviations: 1778377530.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,140 | INFO     | sum of deviations: 17831015774.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,140 | INFO     | mean x (centered): 0.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,141 | INFO     | mean y: 2294917.195530726
[2026-05-04 08:12:01] 2026-05-04 06:11:27,141 | INFO     | intersect: 2294917.195530726
[2026-05-04 08:12:01] 2026-05-04 06:11:27,141 | INFO     | chi2: 2.2262134116259413
[2026-05-04 08:12:01] 2026-05-04 06:11:27,141 | INFO     | sum of square deviations: 1633472487.5
[2026-05-04 08:12:01] 2026-05-04 06:11:27,142 | INFO     | sum of deviations: 28738672702.000004
[2026-05-04 08:12:01] 2026-05-04 06:11:27,143 | INFO     | mean x (centered): 0.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,143 | INFO     | mean y: 2306118.827586207
[2026-05-04 08:12:01] 2026-05-04 06:11:27,143 | INFO     | intersect: 2306118.827586207
[2026-05-04 08:12:01] 2026-05-04 06:11:27,143 | INFO     | chi2: 1.3614419747400925
[2026-05-04 08:12:01] 2026-05-04 06:11:27,143 | INFO     | current chi2=1.3614419747400925 (change=38.84494776510455 %)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,144 | INFO     | sum of square deviations: 1496660620.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | sum of deviations: 27773907743.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | mean x (centered): 0.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | mean y: 2305043.094674556
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | intersect: 2305043.094674556
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | chi2: 1.3619624173381195
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | current chi2=1.3619624173381195 (change=-0.038227306611897785 %)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,145 | INFO     | right removable region: 168
[2026-05-04 08:12:01] 2026-05-04 06:11:27,146 | INFO     | sum of square deviations: 1633472487.5
[2026-05-04 08:12:01] 2026-05-04 06:11:27,147 | INFO     | sum of deviations: -5479057972.499999
[2026-05-04 08:12:01] 2026-05-04 06:11:27,147 | INFO     | mean x (centered): 0.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,147 | INFO     | mean y: 2319109.1896551726
[2026-05-04 08:12:01] 2026-05-04 06:11:27,147 | INFO     | intersect: 2319109.1896551726
[2026-05-04 08:12:01] 2026-05-04 06:11:27,147 | INFO     | chi2: 0.8902163359429214
[2026-05-04 08:12:01] 2026-05-04 06:11:27,147 | INFO     | current chi2=0.8902163359429214 (change=60.01208458749059 %)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,148 | INFO     | sum of square deviations: 1496660620.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | sum of deviations: -6362239305.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | mean x (centered): 0.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | mean y: 2320091.2189349113
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | intersect: 2320091.2189349113
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | chi2: 0.889800051544413
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | current chi2=0.889800051544413 (change=0.04676216125234902 %)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,149 | INFO     | left removable region: 10
[2026-05-04 08:12:01] 2026-05-04 06:11:27,150 | INFO     | sum of square deviations: 1223016419.5
[2026-05-04 08:12:01] 2026-05-04 06:11:27,151 | INFO     | sum of deviations: 4308008367.999999
[2026-05-04 08:12:01] 2026-05-04 06:11:27,151 | INFO     | mean x (centered): 0.0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,151 | INFO     | mean y: 2332374.2025316455
[2026-05-04 08:12:01] 2026-05-04 06:11:27,151 | INFO     | intersect: 2332374.2025316455
[2026-05-04 08:12:01] 2026-05-04 06:11:27,151 | INFO     | chi2: 0.000823851614402413
[2026-05-04 08:12:01] 2026-05-04 06:11:27,151 | INFO     | current memory leak: 3.52 B/s (using 158 data points, chi2=0.00)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | could have reported an average CPU frequency of 2712 MHz (10 samples)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | ..............................
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | . Timing measurements:
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | . get job = 0 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | . initial setup = 1 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | . payload setup = 13 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | . stage-in = 0 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,152 | INFO     | . payload execution = 10894 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,153 | INFO     | . stage-out = 1 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,153 | INFO     | . log creation = 0 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,153 | INFO     | ..............................
[2026-05-04 08:12:01] 2026-05-04 06:11:27,745 | INFO     | 
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | job summary report
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | --------------------------------------------------
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | PanDA job id: 7119931613
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | task id: 49263191
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | errors: (none)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | pilot state: finished 
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | transexitcode: 0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | exeerrorcode: 0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,746 | INFO     | exeerrordiag: 
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | exitcode: 0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | exitmsg: OK
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | cpuconsumptiontime: 40881 s
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | nevents: 400
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | neventsw: 0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | pid: 2931689
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | pgrp: 2931689
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | corecount: 4
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | event service: False
[2026-05-04 08:12:01] 2026-05-04 06:11:27,747 | INFO     | sizes: {0: 2275489, 1: 2277119, 11: 2277147, 10911: 2306728, 10912: 2306727, 10914: 2315803, 10915: 2316181}
[2026-05-04 08:12:01] 2026-05-04 06:11:27,748 | INFO     | --------------------------------------------------
[2026-05-04 08:12:01] 2026-05-04 06:11:27,748 | INFO     | 
[2026-05-04 08:12:01] 2026-05-04 06:11:27,748 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-05-04 08:12:01] 2026-05-04 06:11:27,780 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,782 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 08:12:01] 2026-05-04 06:11:27,783 | INFO     | job 7119931613 has completed (purged errors)
[2026-05-04 08:12:01] 2026-05-04 06:11:27,783 | INFO     | overall cleanup function is called
[2026-05-04 08:12:01] 2026-05-04 06:11:28,792 | INFO     | --- collectZombieJob: --- 10, [2931689]
[2026-05-04 08:12:01] 2026-05-04 06:11:28,793 | INFO     | zombie collector waiting for pid 2931689
[2026-05-04 08:12:01] 2026-05-04 06:11:28,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 08:12:01] 2026-05-04 06:11:28,793 | INFO     | collected zombie processes
[2026-05-04 08:12:01] 2026-05-04 06:11:28,793 | INFO     | will attempt to kill all subprocesses of pid=2931689
[2026-05-04 08:12:01] 2026-05-04 06:11:29,362 | INFO     | process IDs to be killed: [2931689] (in reverse order)
[2026-05-04 08:12:01] 2026-05-04 06:11:29,686 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 08:12:01] 2026-05-04 06:11:29,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 08:12:01] 2026-05-04 06:11:29,715 | INFO     | did not find any defunct processes belonging to 2931689
[2026-05-04 08:12:01] 2026-05-04 06:11:29,740 | INFO     | did not find any defunct processes belonging to 2931689
[2026-05-04 08:12:01] 2026-05-04 06:11:29,740 | INFO     | Ready for new job
[2026-05-04 08:12:01] 2026-05-04 06:11:29,742 | INFO     | ***************************************
[2026-05-04 08:12:01] 2026-05-04 06:11:29,742 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 08:12:01] 2026-05-04 06:11:29,742 | INFO     | ***************************************
[2026-05-04 08:12:01] 2026-05-04 06:11:29,743 | INFO     | 
[2026-05-04 08:12:01] 2026-05-04 06:11:29,752 | INFO     | architecture information:
[2026-05-04 08:12:01] 2026-05-04 06:11:29,752 | INFO     | executing command: cat /etc/os-release
[2026-05-04 08:12:01] 2026-05-04 06:11:29,779 | INFO     | cat /etc/os-release:
[2026-05-04 08:12:01] NAME="CentOS Linux"
[2026-05-04 08:12:01] VERSION="7 (Core)"
[2026-05-04 08:12:01] ID="centos"
[2026-05-04 08:12:01] ID_LIKE="rhel fedora"
[2026-05-04 08:12:01] VERSION_ID="7"
[2026-05-04 08:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 08:12:01] ANSI_COLOR="0;31"
[2026-05-04 08:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 08:12:01] HOME_URL="https://www.centos.org/"
[2026-05-04 08:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 08:12:01] 
[2026-05-04 08:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 08:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 08:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 08:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 08:12:01] 
[2026-05-04 08:12:01] 2026-05-04 06:11:29,780 | INFO     | ***************************************
[2026-05-04 08:12:01] 2026-05-04 06:11:30,283 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-05-04 08:12:01] 2026-05-04 06:11:30,308 | INFO     | sufficient remaining disk space (239787311104 B)
[2026-05-04 08:12:01] 2026-05-04 06:11:30,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 08:12:01] 2026-05-04 06:11:30,309 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 08:12:01] 2026-05-04 06:11:30,309 | INFO     | update_server=False
[2026-05-04 08:12:01] 2026-05-04 06:11:30,309 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 08:12:01] 2026-05-04 06:11:30,457 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-04 08:12:01] 2026-05-04 06:11:30,458 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-04 08:12:01] 2026-05-04 06:11:30,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 08:12:01] 2026-05-04 06:11:30,458 | INFO     | will abort loop
[2026-05-04 08:12:01] 2026-05-04 06:11:30,564 | INFO     | all data control threads have been joined
[2026-05-04 08:12:01] 2026-05-04 06:11:30,954 | INFO     | all job control threads have been joined
[2026-05-04 08:12:01] 2026-05-04 06:11:31,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 08:12:01] 2026-05-04 06:11:31,312 | INFO     | [job] retrieve thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,332 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,462 | INFO     | [job] job monitor thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,570 | INFO     | [data] control thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,638 | INFO     | all payload control threads have been joined
[2026-05-04 08:12:01] 2026-05-04 06:11:31,735 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,778 | INFO     | [payload] failed_post thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,848 | INFO     | [job] validate thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:31,959 | INFO     | [job] control thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:32,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 08:12:01] 2026-05-04 06:11:32,449 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:32,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:32,643 | INFO     | [payload] control thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:32,653 | INFO     | [data] copytool_in thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:32,800 | INFO     | [payload] validate_post thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:32,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 08:12:01] 2026-05-04 06:11:33,261 | INFO     | [job] queue monitor thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:33,282 | INFO     | [data] copytool_out thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:36,942 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 08:12:01] 2026-05-04 06:11:38,255 | INFO     | [monitor] cgroup control has ended
[2026-05-04 08:12:01] 2026-05-04 06:11:38,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22451954939712)>', '<ExcThread(monitor, started 22451654199040)>']
[2026-05-04 08:12:01] 2026-05-04 06:11:43,642 | INFO     | all workflow threads have been joined
[2026-05-04 08:12:01] 2026-05-04 06:11:43,643 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 08:12:01] 2026-05-04 06:11:43,643 | INFO     | traces error code: 0
[2026-05-04 08:12:01] 2026-05-04 06:11:43,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 08:12:01] 2026-05-04 06:12:01,175 | INFO     | PID=2928771 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 08:12:01] 2026-05-04 06:12:01,176 | INFO     | .. there are 26 such processes running
[2026-05-04 08:12:01] 2026-05-04 06:12:01,176 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 08:12:01] 2026-05-04 06:12:01,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 08:12:01] 2026-05-04 06:12:01,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 08:12:01] 2026-05-04 06:12:01,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 08:12:01] 2026-05-04 06:12:01,176 | INFO     | [monitor] control thread has ended
[2026-05-04 08:12:01] 2026-05-04 06:12:01,322 [wrapper] ==== pilot stdout END ====
[2026-05-04 08:12:01] 2026-05-04 06:12:01,326 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 08:12:01] 2026-05-04 06:12:01,330 [wrapper] pilotpid: 2928771
[2026-05-04 08:12:01] 2026-05-04 06:12:01,334 [wrapper] Pilot exit status: 0
[2026-05-04 08:12:01] 2026-05-04 06:12:01,351 [wrapper] pandaids: 7119931613 7119931613
[2026-05-04 08:12:01] 2026-05-04 06:12:01,531 [wrapper] cleanup supervisor_pilot 3345326 2928772
[2026-05-04 08:12:01] 2026-05-04 06:12:01,535 [wrapper] Test setup, not cleaning
[2026-05-04 08:12:01] 2026-05-04 06:12:01,539 [wrapper] apfmon messages muted
[2026-05-04 08:12:01] 2026-05-04 06:12:01,543 [wrapper] ==== wrapper stdout END ====
[2026-05-04 08:12:01] 2026-05-04 06:12:01,547 [wrapper] ==== wrapper stderr END ====
[2026-05-04 08:12:01]  *** Error codes and diagnostics ***
[2026-05-04 08:12:01]     "exeErrorCode": 0,
[2026-05-04 08:12:01]     "pilotErrorCode": 0,
[2026-05-04 08:12:01]  *** Listing of results directory ***
[2026-05-04 08:12:01] total 644208
[2026-05-04 08:12:01] drwx------. 5 boinc boinc      4096 Apr 22 11:13 pilot3
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc    683926 May  1 08:48 pilot3.tar.gz
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc      5631 May  1 08:48 queuedata.json
[2026-05-04 08:12:01] -rwx------. 1 boinc boinc     36322 May  1 08:48 runpilot2-wrapper.sh
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc       100 May  4 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 08:12:01] -rwxr-xr-x. 1 boinc boinc      7986 May  4 04:49 run_atlas
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc       105 May  4 04:49 job.xml
[2026-05-04 08:12:01] -rw-r--r--. 3 boinc boinc 223972015 May  4 04:49 EVNT.49263189._001882.pool.root.1
[2026-05-04 08:12:01] -rw-r--r--. 3 boinc boinc 223972015 May  4 04:49 ATLAS.root_0
[2026-05-04 08:12:01] -rw-r--r--. 2 boinc boinc     15667 May  4 04:49 start_atlas.sh
[2026-05-04 08:12:01] drwxrwx--x. 2 boinc boinc      4096 May  4 04:49 shared
[2026-05-04 08:12:01] -rw-r--r--. 2 boinc boinc    697426 May  4 04:49 input.tar.gz
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc         0 May  4 04:49 boinc_lockfile
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc      6544 May  4 05:09 init_data.xml
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc      2576 May  4 05:09 pandaJob.out
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc   1003025 May  4 05:09 agis_schedconf.cvmfs.json
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc       440 May  4 05:09 workernode_map.json
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc 204922577 May  4 08:10 HITS.49263191._085983.pool.root.1
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc       488 May  4 08:10 boinc_task_state.xml
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc        96 May  4 08:11 pilot_heartbeat.json
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc      1029 May  4 08:11 memory_monitor_summary.json
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc   1508687 May  4 08:11 agis_ddmendpoints.agis.ALL.json
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc    315812 May  4 08:11 log.49263191._085983.job.log.tgz.1
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc      6374 May  4 08:11 heartbeat_new.json
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc      6265 May  4 08:11 heartbeat.json
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc        28 May  4 08:12 wrapper_checkpoint.txt
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc      8192 May  4 08:12 boinc_mmap_file
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc       823 May  4 08:12 pilotlog.txt
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc   1013720 May  4 08:12 log.49263191._085983.job.log.1
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc       357 May  4 08:12 output.list
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc       410 May  4 08:12 runtime_log
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc   1351680 May  4 08:12 result.tar.gz
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc      8905 May  4 08:12 runtime_log.err
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc       790 May  4 08:12 4cbdc264066e.diag
[2026-05-04 08:12:01] -rw-r--r--. 1 boinc boinc     22740 May  4 08:12 stderr.txt
[2026-05-04 08:12:01] HITS file was successfully produced:
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc 204922577 May  4 08:10 shared/HITS.pool.root.1
[2026-05-04 08:12:01]  *** Contents of shared directory: ***
[2026-05-04 08:12:01] total 420872
[2026-05-04 08:12:01] -rw-r--r--. 3 boinc boinc 223972015 May  4 04:49 ATLAS.root_0
[2026-05-04 08:12:01] -rw-r--r--. 2 boinc boinc     15667 May  4 04:49 start_atlas.sh
[2026-05-04 08:12:01] -rw-r--r--. 2 boinc boinc    697426 May  4 04:49 input.tar.gz
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc 204922577 May  4 08:10 HITS.pool.root.1
[2026-05-04 08:12:01] -rw-------. 1 boinc boinc   1351680 May  4 08:12 result.tar.gz
08:12:03 (2924529): run_atlas exited; CPU time 41517.034342
08:12:03 (2924529): called boinc_finish(0)

</stderr_txt>
]]>

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