Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:12 (2790900): wrapper (7.7.26015): starting
02:04:12 (2790900): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 02:04:12] Arguments: --nthreads 4
[2026-05-03 02:04:12] Threads: 4
[2026-05-03 02:04:12] Checking for CVMFS
[2026-05-03 02:04:12] No cvmfs_config command found, will try listing directly
[2026-05-03 02:04:12] CVMFS is ok
[2026-05-03 02:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 02:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 02:04:12] Further information can be found at the LHC@home message board.
[2026-05-03 02:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 02:04:12] Checking for apptainer binary...
[2026-05-03 02:04:12] which: no apptainer in ((null))
[2026-05-03 02:04:12] apptainer is not installed, using version from CVMFS
[2026-05-03 02:04:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 02:04:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/17/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-05-03 02:04:12] apptainer works
[2026-05-03 02:04:12] Set ATHENA_PROC_NUMBER=4
[2026-05-03 02:04:12] Set ATHENA_CORE_NUMBER=4
[2026-05-03 02:04:12] Starting ATLAS job with PandaID=7124431004
[2026-05-03 02:04:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:00:29 (3150448): wrapper (7.7.26015): starting
06:00:29 (3150448): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 06:00:29] Arguments: --nthreads 4
[2026-05-03 06:00:29] Threads: 4
[2026-05-03 06:00:29] This job has been restarted, cleaning up previous attempt
[2026-05-03 06:00:29] Checking for CVMFS
[2026-05-03 06:00:29] No cvmfs_config command found, will try listing directly
[2026-05-03 06:00:29] CVMFS is ok
[2026-05-03 06:00:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 06:00:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 06:00:29] Further information can be found at the LHC@home message board.
[2026-05-03 06:00:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 06:00:29] Checking for apptainer binary...
[2026-05-03 06:00:29] which: no apptainer in ((null))
[2026-05-03 06:00:29] apptainer is not installed, using version from CVMFS
[2026-05-03 06:00:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 06:00:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/17/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-05-03 06:00:29] apptainer works
[2026-05-03 06:00:29] Set ATHENA_PROC_NUMBER=4
[2026-05-03 06:00:29] Set ATHENA_CORE_NUMBER=4
[2026-05-03 06:00:29] Starting ATLAS job with PandaID=7124431004
[2026-05-03 06:00:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 09:35:08]  *** The last 200 lines of the pilot log: ***
[2026-05-03 09:35:08] 2026-05-03 07:34:34,941 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 09:35:08] 2026-05-03 07:34:34,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 09:35:08] 2026-05-03 07:34:34,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 09:35:08] 2026-05-03 07:34:34,946 | INFO     | fitting pss+swap vs Time
[2026-05-03 09:35:08] 2026-05-03 07:34:34,946 | INFO     | sum of square deviations: 2871616632.5
[2026-05-03 09:35:08] 2026-05-03 07:34:34,947 | INFO     | sum of deviations: 30848827889.999996
[2026-05-03 09:35:08] 2026-05-03 07:34:34,947 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,948 | INFO     | mean y: 2327749.580952381
[2026-05-03 09:35:08] 2026-05-03 07:34:34,948 | INFO     | intersect: 2327749.580952381
[2026-05-03 09:35:08] 2026-05-03 07:34:34,948 | INFO     | chi2: 1.3171127313610802
[2026-05-03 09:35:08] 2026-05-03 07:34:34,948 | INFO     | sum of square deviations: 2671343110.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,949 | INFO     | sum of deviations: 30003117180.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,950 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,950 | INFO     | mean y: 2327105.507317073
[2026-05-03 09:35:08] 2026-05-03 07:34:34,950 | INFO     | intersect: 2327105.507317073
[2026-05-03 09:35:08] 2026-05-03 07:34:34,950 | INFO     | chi2: 1.3176282278489113
[2026-05-03 09:35:08] 2026-05-03 07:34:34,950 | INFO     | current chi2=1.3176282278489113 (change=-0.03913837255968275 %)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,950 | INFO     | right removable region: 204
[2026-05-03 09:35:08] 2026-05-03 07:34:34,951 | INFO     | sum of square deviations: 2671343110.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,952 | INFO     | sum of deviations: 4537714726.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,952 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,952 | INFO     | mean y: 2347525.775609756
[2026-05-03 09:35:08] 2026-05-03 07:34:34,952 | INFO     | intersect: 2347525.775609756
[2026-05-03 09:35:08] 2026-05-03 07:34:34,952 | INFO     | chi2: 0.008824240061677237
[2026-05-03 09:35:08] 2026-05-03 07:34:34,952 | INFO     | current chi2=0.008824240061677237 (change=99.33003152641624 %)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,953 | INFO     | sum of square deviations: 2480604650.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,954 | INFO     | sum of deviations: 5547917395.5
[2026-05-03 09:35:08] 2026-05-03 07:34:34,954 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,954 | INFO     | mean y: 2346730.825
[2026-05-03 09:35:08] 2026-05-03 07:34:34,954 | INFO     | intersect: 2346730.825
[2026-05-03 09:35:08] 2026-05-03 07:34:34,954 | INFO     | chi2: 0.0009664701050788107
[2026-05-03 09:35:08] 2026-05-03 07:34:34,955 | INFO     | current chi2=0.0009664701050788107 (change=89.04755425596261 %)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,955 | INFO     | sum of square deviations: 2299168690.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,956 | INFO     | sum of deviations: 4703814065.999997
[2026-05-03 09:35:08] 2026-05-03 07:34:34,956 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,956 | INFO     | mean y: 2347437.9076923076
[2026-05-03 09:35:08] 2026-05-03 07:34:34,956 | INFO     | intersect: 2347437.9076923076
[2026-05-03 09:35:08] 2026-05-03 07:34:34,957 | INFO     | chi2: 0.000711898946755254
[2026-05-03 09:35:08] 2026-05-03 07:34:34,957 | INFO     | current chi2=0.000711898946755254 (change=26.34030343885263 %)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,957 | INFO     | sum of square deviations: 2126802667.5
[2026-05-03 09:35:08] 2026-05-03 07:34:34,958 | INFO     | sum of deviations: 4011176389.9999995
[2026-05-03 09:35:08] 2026-05-03 07:34:34,958 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,958 | INFO     | mean y: 2348050.789473684
[2026-05-03 09:35:08] 2026-05-03 07:34:34,958 | INFO     | intersect: 2348050.789473684
[2026-05-03 09:35:08] 2026-05-03 07:34:34,959 | INFO     | chi2: 0.0005624413128230102
[2026-05-03 09:35:08] 2026-05-03 07:34:34,959 | INFO     | current chi2=0.0005624413128230102 (change=20.99422040353521 %)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,959 | INFO     | left removable region: 20
[2026-05-03 09:35:08] 2026-05-03 07:34:34,959 | INFO     | sum of square deviations: 1931608310.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,960 | INFO     | sum of deviations: 3799819686.0000024
[2026-05-03 09:35:08] 2026-05-03 07:34:34,960 | INFO     | mean x (centered): 0.0
[2026-05-03 09:35:08] 2026-05-03 07:34:34,960 | INFO     | mean y: 2347852.6195652173
[2026-05-03 09:35:08] 2026-05-03 07:34:34,960 | INFO     | intersect: 2347852.6195652173
[2026-05-03 09:35:08] 2026-05-03 07:34:34,961 | INFO     | chi2: 0.0005372660540380273
[2026-05-03 09:35:08] 2026-05-03 07:34:34,961 | INFO     | current memory leak: 1.97 B/s (using 184 data points, chi2=0.00)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,961 | INFO     | could have reported an average CPU frequency of 2527 MHz (11 samples)
[2026-05-03 09:35:08] 2026-05-03 07:34:34,961 | INFO     | ..............................
[2026-05-03 09:35:08] 2026-05-03 07:34:34,961 | INFO     | . Timing measurements:
[2026-05-03 09:35:08] 2026-05-03 07:34:34,961 | INFO     | . get job = 0 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | . initial setup = 1 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | . payload setup = 14 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | . stage-in = 0 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | . payload execution = 12799 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | . stage-out = 0 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | . log creation = 0 s
[2026-05-03 09:35:08] 2026-05-03 07:34:34,962 | INFO     | ..............................
[2026-05-03 09:35:08] 2026-05-03 07:34:35,058 | INFO     | 
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | job summary report
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | --------------------------------------------------
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | PanDA job id: 7124431004
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | task id: 50016906
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | errors: (none)
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | pilot state: finished 
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | transexitcode: 0
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | exeerrorcode: 0
[2026-05-03 09:35:08] 2026-05-03 07:34:35,059 | INFO     | exeerrordiag: 
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | exitcode: 0
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | exitmsg: OK
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | cpuconsumptiontime: 47301 s
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | nevents: 400
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | neventsw: 0
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | pid: 3156995
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | pgrp: 3156995
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | corecount: 4
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | event service: False
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | sizes: {0: 2277020, 11: 2277020, 12817: 2306961, 12818: 2315983, 12819: 2316039, 12821: 2316233}
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | --------------------------------------------------
[2026-05-03 09:35:08] 2026-05-03 07:34:35,060 | INFO     | 
[2026-05-03 09:35:08] 2026-05-03 07:34:35,061 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/17
[2026-05-03 09:35:08] 2026-05-03 07:34:35,080 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 09:35:08] 2026-05-03 07:34:35,083 | INFO     | job 7124431004 has completed (purged errors)
[2026-05-03 09:35:08] 2026-05-03 07:34:35,083 | INFO     | overall cleanup function is called
[2026-05-03 09:35:08] 2026-05-03 07:34:36,090 | INFO     | --- collectZombieJob: --- 10, [3156995]
[2026-05-03 09:35:08] 2026-05-03 07:34:36,090 | INFO     | zombie collector waiting for pid 3156995
[2026-05-03 09:35:08] 2026-05-03 07:34:36,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 09:35:08] 2026-05-03 07:34:36,090 | INFO     | collected zombie processes
[2026-05-03 09:35:08] 2026-05-03 07:34:36,090 | INFO     | will attempt to kill all subprocesses of pid=3156995
[2026-05-03 09:35:08] 2026-05-03 07:34:36,405 | INFO     | process IDs to be killed: [3156995] (in reverse order)
[2026-05-03 09:35:08] 2026-05-03 07:34:36,527 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 09:35:08] 2026-05-03 07:34:36,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 09:35:08] 2026-05-03 07:34:36,541 | INFO     | did not find any defunct processes belonging to 3156995
[2026-05-03 09:35:08] 2026-05-03 07:34:36,555 | INFO     | did not find any defunct processes belonging to 3156995
[2026-05-03 09:35:08] 2026-05-03 07:34:36,556 | INFO     | Ready for new job
[2026-05-03 09:35:08] 2026-05-03 07:34:36,557 | INFO     | ***************************************
[2026-05-03 09:35:08] 2026-05-03 07:34:36,557 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 09:35:08] 2026-05-03 07:34:36,557 | INFO     | ***************************************
[2026-05-03 09:35:08] 2026-05-03 07:34:36,558 | INFO     | 
[2026-05-03 09:35:08] 2026-05-03 07:34:36,561 | INFO     | architecture information:
[2026-05-03 09:35:08] 2026-05-03 07:34:36,562 | INFO     | executing command: cat /etc/os-release
[2026-05-03 09:35:08] 2026-05-03 07:34:36,575 | INFO     | cat /etc/os-release:
[2026-05-03 09:35:08] NAME="CentOS Linux"
[2026-05-03 09:35:08] VERSION="7 (Core)"
[2026-05-03 09:35:08] ID="centos"
[2026-05-03 09:35:08] ID_LIKE="rhel fedora"
[2026-05-03 09:35:08] VERSION_ID="7"
[2026-05-03 09:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 09:35:08] ANSI_COLOR="0;31"
[2026-05-03 09:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 09:35:08] HOME_URL="https://www.centos.org/"
[2026-05-03 09:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 09:35:08] 
[2026-05-03 09:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 09:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 09:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 09:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 09:35:08] 
[2026-05-03 09:35:08] 2026-05-03 07:34:36,575 | INFO     | ***************************************
[2026-05-03 09:35:08] 2026-05-03 07:34:37,077 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/17
[2026-05-03 09:35:08] 2026-05-03 07:34:37,092 | INFO     | sufficient remaining disk space (51517587456 B)
[2026-05-03 09:35:08] 2026-05-03 07:34:37,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 09:35:08] 2026-05-03 07:34:37,093 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 09:35:08] 2026-05-03 07:34:37,093 | INFO     | update_server=False
[2026-05-03 09:35:08] 2026-05-03 07:34:37,093 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 09:35:08] 2026-05-03 07:34:37,138 | INFO     | all job control threads have been joined
[2026-05-03 09:35:08] 2026-05-03 07:34:37,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 09:35:08] 2026-05-03 07:34:37,552 | INFO     | aborting loop
[2026-05-03 09:35:08] 2026-05-03 07:34:38,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 09:35:08] 2026-05-03 07:34:38,035 | INFO     | all data control threads have been joined
[2026-05-03 09:35:08] 2026-05-03 07:34:38,099 | INFO     | [job] retrieve thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,142 | INFO     | [job] control thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,289 | INFO     | [payload] failed_post thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,305 | INFO     | all payload control threads have been joined
[2026-05-03 09:35:08] 2026-05-03 07:34:38,414 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,557 | INFO     | [job] job monitor thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,834 | INFO     | [payload] validate_post thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,918 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:38,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 09:35:08] 2026-05-03 07:34:39,041 | INFO     | [data] control thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:39,263 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:39,284 | INFO     | [job] validate thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:39,310 | INFO     | [payload] control thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:39,520 | INFO     | [data] copytool_in thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:40,016 | INFO     | [data] copytool_out thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:40,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 09:35:08] 2026-05-03 07:34:41,073 | INFO     | [job] queue monitor thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:42,996 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:34:47,382 | INFO     | job.realtimelogging is not enabled
[2026-05-03 09:35:08] 2026-05-03 07:34:48,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 09:35:08] 2026-05-03 07:35:03,630 | INFO     | [monitor] cgroup control has ended
[2026-05-03 09:35:08] 2026-05-03 07:35:03,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22791949707072)>', '<ExcThread(monitor, started 22791642404608)>']
[2026-05-03 09:35:08] 2026-05-03 07:35:07,407 | INFO     | PID=3154235 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 09:35:08] 2026-05-03 07:35:07,407 | INFO     | .. there are 13 such processes running
[2026-05-03 09:35:08] 2026-05-03 07:35:07,408 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 09:35:08] 2026-05-03 07:35:07,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 09:35:08] 2026-05-03 07:35:07,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 09:35:08] 2026-05-03 07:35:07,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 09:35:08] 2026-05-03 07:35:07,409 | INFO     | [monitor] control thread has ended
[2026-05-03 09:35:08] 2026-05-03 07:35:08,668 | INFO     | all workflow threads have been joined
[2026-05-03 09:35:08] 2026-05-03 07:35:08,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 09:35:08] 2026-05-03 07:35:08,668 | INFO     | traces error code: 0
[2026-05-03 09:35:08] 2026-05-03 07:35:08,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 09:35:08] 2026-05-03 07:35:08,793 [wrapper] ==== pilot stdout END ====
[2026-05-03 09:35:08] 2026-05-03 07:35:08,795 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 09:35:08] 2026-05-03 07:35:08,798 [wrapper] pilotpid: 3154235
[2026-05-03 09:35:08] 2026-05-03 07:35:08,800 [wrapper] Pilot exit status: 0
[2026-05-03 09:35:08] 2026-05-03 07:35:08,811 [wrapper] pandaids: 7124431004 7124431004
[2026-05-03 09:35:08] 2026-05-03 07:35:08,885 [wrapper] cleanup supervisor_pilot 3423260 3154236
[2026-05-03 09:35:08] 2026-05-03 07:35:08,888 [wrapper] Test setup, not cleaning
[2026-05-03 09:35:08] 2026-05-03 07:35:08,891 [wrapper] apfmon messages muted
[2026-05-03 09:35:08] 2026-05-03 07:35:08,893 [wrapper] ==== wrapper stdout END ====
[2026-05-03 09:35:08] 2026-05-03 07:35:08,896 [wrapper] ==== wrapper stderr END ====
[2026-05-03 09:35:08]  *** Error codes and diagnostics ***
[2026-05-03 09:35:08]     "exeErrorCode": 0,
[2026-05-03 09:35:08]     "pilotErrorCode": 0,
[2026-05-03 09:35:08]  *** Listing of results directory ***
[2026-05-03 09:35:08] total 787300
[2026-05-03 09:35:08] drwx------. 5 boinc boinc      4096 Apr 22 11:13 pilot3
[2026-05-03 09:35:08] -rwx------. 1 boinc boinc     36322 May  1 10:43 runpilot2-wrapper.sh
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc      5631 May  1 10:43 queuedata.json
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc    683926 May  1 10:43 pilot3.tar.gz
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc       100 May  3 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 09:35:08] -rwxr-xr-x. 1 boinc boinc      7986 May  3 01:12 run_atlas
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc       105 May  3 01:12 job.xml
[2026-05-03 09:35:08] -rw-r--r--. 3 boinc boinc 314518518 May  3 02:04 EVNT.50016902._000001.pool.root.1
[2026-05-03 09:35:08] -rw-r--r--. 3 boinc boinc 314518518 May  3 02:04 ATLAS.root_0
[2026-05-03 09:35:08] -rw-r--r--. 2 boinc boinc     15667 May  3 02:04 start_atlas.sh
[2026-05-03 09:35:08] drwxrwx--x. 2 boinc boinc      4096 May  3 02:04 shared
[2026-05-03 09:35:08] -rw-r--r--. 2 boinc boinc    697398 May  3 02:04 input.tar.gz
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc         0 May  3 02:04 boinc_lockfile
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc      2554 May  3 06:00 pandaJob.out
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc   1002964 May  3 06:00 agis_schedconf.cvmfs.json
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc       452 May  3 06:00 workernode_map.json
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc      6490 May  3 07:13 init_data.xml
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc 169954974 May  3 09:33 HITS.50016906._000762.pool.root.1
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc       489 May  3 09:34 boinc_task_state.xml
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc      1031 May  3 09:34 memory_monitor_summary.json
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc   1508687 May  3 09:34 agis_ddmendpoints.agis.ALL.json
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc    335445 May  3 09:34 log.50016906._000762.job.log.tgz.1
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc      6409 May  3 09:34 heartbeat_new.json
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc      6300 May  3 09:34 heartbeat.json
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc      8192 May  3 09:35 boinc_mmap_file
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc        28 May  3 09:35 wrapper_checkpoint.txt
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc        96 May  3 09:35 pilot_heartbeat.json
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc      4905 May  3 09:35 pilotlog.txt
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc   1197265 May  3 09:35 log.50016906._000762.job.log.1
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc       357 May  3 09:35 output.list
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc       410 May  3 09:35 runtime_log
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc   1546240 May  3 09:35 result.tar.gz
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc      8922 May  3 09:35 runtime_log.err
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc       790 May  3 09:35 67b27a92564f.diag
[2026-05-03 09:35:08] -rw-r--r--. 1 boinc boinc     22486 May  3 09:35 stderr.txt
[2026-05-03 09:35:08] HITS file was successfully produced:
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc 169954974 May  3 09:33 shared/HITS.pool.root.1
[2026-05-03 09:35:08]  *** Contents of shared directory: ***
[2026-05-03 09:35:08] total 475340
[2026-05-03 09:35:08] -rw-r--r--. 3 boinc boinc 314518518 May  3 02:04 ATLAS.root_0
[2026-05-03 09:35:08] -rw-r--r--. 2 boinc boinc     15667 May  3 02:04 start_atlas.sh
[2026-05-03 09:35:08] -rw-r--r--. 2 boinc boinc    697398 May  3 02:04 input.tar.gz
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc 169954974 May  3 09:33 HITS.pool.root.1
[2026-05-03 09:35:08] -rw-------. 1 boinc boinc   1546240 May  3 09:35 result.tar.gz
09:35:10 (3150448): run_atlas exited; CPU time 47791.888250
09:35:10 (3150448): called boinc_finish(0)

</stderr_txt>
]]>

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