Stderr output

<core_client_version>8.2.10</core_client_version>
<![CDATA[
<stderr_txt>
13:39:39 (22078): wrapper (7.7.26015): starting
13:39:39 (22078): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 13:39:40] Arguments: --nthreads 8
[2026-05-01 13:39:40] Threads: 8
[2026-05-01 13:39:40] Checking for CVMFS
[2026-05-01 13:39:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 13:39:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 13:39:40] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 13:39:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 13:39:40] 2.11.0.0 11549 23386 62348 159093 0 50 3547051 4096001 0 130560 0 2383249 99.433 1805179 390 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-01 13:39:40] CVMFS is ok
[2026-05-01 13:39:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 13:39:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 13:39:40] Further information can be found at the LHC@home message board.
[2026-05-01 13:39:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 13:39:40] Checking for apptainer binary...
[2026-05-01 13:39:40] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-01 13:39:40] apptainer is not installed, using version from CVMFS
[2026-05-01 13:39:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 13:39:40] WARNING: Environment variable TMPDIR already has value [/tmp/job_11566560/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node197
[2026-05-01 13:39:40] apptainer works
[2026-05-01 13:39:40] Set ATHENA_PROC_NUMBER=8
[2026-05-01 13:39:40] Set ATHENA_CORE_NUMBER=8
[2026-05-01 13:39:40] Starting ATLAS job with PandaID=7122823975
[2026-05-01 13:39:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11566560/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 14:42:00]  *** The last 200 lines of the pilot log: ***
[2026-05-01 14:42:00]  ddmendpoint=NDGF-T1_DATADISK
[2026-05-01 14:42:00]  ddmendpoint_alt=None
[2026-05-01 14:42:00]  direct_access_lan=False
[2026-05-01 14:42:00]  direct_access_wan=False
[2026-05-01 14:42:00]  domain=
[2026-05-01 14:42:00]  filesize=294695
[2026-05-01 14:42:00]  filetype=log
[2026-05-01 14:42:00]  guid=72ddd4c3-9fd2-4c61-81f7-377f5bbe7d9b
[2026-05-01 14:42:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-01 14:42:00]  is_altstaged=None
[2026-05-01 14:42:00]  is_tar=False
[2026-05-01 14:42:00]  lfn=log.50016984._000738.job.log.tgz.1
[2026-05-01 14:42:00]  mtime=0
[2026-05-01 14:42:00]  protocol_id=None
[2026-05-01 14:42:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-01 14:42:00]  replicas=None
[2026-05-01 14:42:00]  scope=mc23_13p6TeV
[2026-05-01 14:42:00]  status=None
[2026-05-01 14:42:00]  status_code=0
[2026-05-01 14:42:00]  storage_token=
[2026-05-01 14:42:00]  surl=/tmp/job_11566560/atlas/pilot/slots/0/PanDA_Pilot-7122823975/log.50016984._000738.job.log.tgz.1
[2026-05-01 14:42:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/98/log.50016984._000738.job.log.tgz.1
[2026-05-01 14:42:00]  workdir=None
[2026-05-01 14:42:00] ]
[2026-05-01 14:42:00] 2026-05-01 12:41:25,637 | INFO     | transferring file log.50016984._000738.job.log.tgz.1 from /tmp/job_11566560/atlas/pilot/slots/0/PanDA_Pilot-7122823975/log.50016984._000738.job.log.tgz.1 to /tmp/j
[2026-05-01 14:42:00] 2026-05-01 12:41:25,637 | INFO     | executing command: /usr/bin/env mv /tmp/job_11566560/atlas/pilot/slots/0/PanDA_Pilot-7122823975/log.50016984._000738.job.log.tgz.1 /tmp/job_11566560/atlas/pilot/sl
[2026-05-01 14:42:00] 2026-05-01 12:41:25,645 | INFO     | adding to output.list: log.50016984._000738.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/98/log.50016984._000738.job.log.tg
[2026-05-01 14:42:00] 2026-05-01 12:41:25,646 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-01 14:42:00] 2026-05-01 12:41:25,646 | INFO     | summary of transferred files:
[2026-05-01 14:42:00] 2026-05-01 12:41:25,646 | INFO     |  -- lfn=log.50016984._000738.job.log.tgz.1, status_code=0, status=transferred
[2026-05-01 14:42:00] 2026-05-01 12:41:25,646 | INFO     | stage-out finished correctly
[2026-05-01 14:42:00] 2026-05-01 12:41:26,302 | INFO     | monitor loop #281: job 0:7122823975 is in state 'finished'
[2026-05-01 14:42:00] 2026-05-01 12:41:26,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 14:42:00] 2026-05-01 12:41:26,739 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 14:42:00] 2026-05-01 12:41:27,660 | INFO     | job 7122823975 has state=finished
[2026-05-01 14:42:00] 2026-05-01 12:41:27,660 | INFO     | preparing for final server update for job 7122823975 in state='finished'
[2026-05-01 14:42:00] 2026-05-01 12:41:27,660 | INFO     | reading metadata from: /tmp/job_11566560/atlas/pilot/slots/0/PanDA_Pilot-7122823975/jobReport.json
[2026-05-01 14:42:00] 2026-05-01 12:41:27,661 | INFO     | added worker_node to metadata from /tmp/job_11566560/atlas/pilot/slots/0/workernode_map.json
[2026-05-01 14:42:00] 2026-05-01 12:41:27,661 | INFO     | this job has now completed (state=finished)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,662 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,662 | INFO     | log transfer has been attempted: DONE
[2026-05-01 14:42:00] 2026-05-01 12:41:27,662 | INFO     | job 7122823975 has finished - writing final server update
[2026-05-01 14:42:00] 2026-05-01 12:41:27,662 | INFO     | total number of processed events: 400 (read)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,679 | INFO     | using path: /tmp/job_11566560/atlas/pilot/slots/0/PanDA_Pilot-7122823975/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,679 | INFO     | extracted standard info from prmon json
[2026-05-01 14:42:00] 2026-05-01 12:41:27,679 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 14:42:00] 2026-05-01 12:41:27,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 14:42:00] 2026-05-01 12:41:27,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 14:42:00] 2026-05-01 12:41:27,680 | INFO     | fitting pss+swap vs Time
[2026-05-01 14:42:00] 2026-05-01 12:41:27,680 | INFO     | sum of square deviations: 48810217.5
[2026-05-01 14:42:00] 2026-05-01 12:41:27,680 | INFO     | sum of deviations: -8394279967.0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,680 | INFO     | mean x (centered): 0.0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,680 | INFO     | mean y: 2826109.037037037
[2026-05-01 14:42:00] 2026-05-01 12:41:27,680 | INFO     | intersect: 2826109.037037037
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | chi2: 0.08547540804681773
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | current memory leak: -171.98 B/s (using 54 data points, chi2=0.09)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | could have reported an average CPU frequency of 2365 MHz (6 samples)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | ..............................
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . Timing measurements:
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . get job = 0 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . initial setup = 3 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . payload setup = 3 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . stage-in = 0 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . payload execution = 3678 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . stage-out = 0 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | . log creation = 0 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,681 | INFO     | ..............................
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | 
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | job summary report
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | --------------------------------------------------
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | PanDA job id: 7122823975
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | task id: 50016984
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | errors: (none)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | pilot state: finished 
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | transexitcode: 0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | exeerrorcode: 0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,865 | INFO     | exeerrordiag: 
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | exitcode: 0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | exitmsg: OK
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | cpuconsumptiontime: 27600 s
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | nevents: 400
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | neventsw: 0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | pid: 32679
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | pgrp: 32679
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | corecount: 8
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | event service: False
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | sizes: {0: 2277213, 10: 2277213, 3685: 2303111, 3686: 2312139, 3687: 2312195, 3688: 2312389}
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | --------------------------------------------------
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | 
[2026-05-01 14:42:00] 2026-05-01 12:41:27,866 | INFO     | executing command: ls -lF /tmp/job_11566560/atlas/pilot/slots/0
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | job 7122823975 has completed (purged errors)
[2026-05-01 14:42:00] 2026-05-01 12:41:27,876 | INFO     | overall cleanup function is called
[2026-05-01 14:42:00] 2026-05-01 12:41:28,882 | INFO     | --- collectZombieJob: --- 10, [32679]
[2026-05-01 14:42:00] 2026-05-01 12:41:28,882 | INFO     | zombie collector waiting for pid 32679
[2026-05-01 14:42:00] 2026-05-01 12:41:28,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 14:42:00] 2026-05-01 12:41:28,882 | INFO     | collected zombie processes
[2026-05-01 14:42:00] 2026-05-01 12:41:28,882 | INFO     | will attempt to kill all subprocesses of pid=32679
[2026-05-01 14:42:00] 2026-05-01 12:41:28,958 | INFO     | process IDs to be killed: [32679] (in reverse order)
[2026-05-01 14:42:00] 2026-05-01 12:41:28,991 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 14:42:00] 2026-05-01 12:41:28,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 14:42:00] 2026-05-01 12:41:28,994 | INFO     | did not find any defunct processes belonging to 32679
[2026-05-01 14:42:00] 2026-05-01 12:41:28,997 | INFO     | did not find any defunct processes belonging to 32679
[2026-05-01 14:42:00] 2026-05-01 12:41:28,997 | INFO     | Ready for new job
[2026-05-01 14:42:00] 2026-05-01 12:41:28,998 | INFO     | ***************************************
[2026-05-01 14:42:00] 2026-05-01 12:41:28,998 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 14:42:00] 2026-05-01 12:41:28,998 | INFO     | ***************************************
[2026-05-01 14:42:00] 2026-05-01 12:41:28,998 | INFO     | 
[2026-05-01 14:42:00] 2026-05-01 12:41:29,011 | INFO     | architecture information:
[2026-05-01 14:42:00] 2026-05-01 12:41:29,012 | INFO     | executing command: cat /etc/os-release
[2026-05-01 14:42:00] 2026-05-01 12:41:29,017 | INFO     | cat /etc/os-release:
[2026-05-01 14:42:00] NAME="CentOS Linux"
[2026-05-01 14:42:00] VERSION="7 (Core)"
[2026-05-01 14:42:00] ID="centos"
[2026-05-01 14:42:00] ID_LIKE="rhel fedora"
[2026-05-01 14:42:00] VERSION_ID="7"
[2026-05-01 14:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 14:42:00] ANSI_COLOR="0;31"
[2026-05-01 14:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 14:42:00] HOME_URL="https://www.centos.org/"
[2026-05-01 14:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 14:42:00] 
[2026-05-01 14:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 14:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 14:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 14:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 14:42:00] 
[2026-05-01 14:42:00] 2026-05-01 12:41:29,017 | INFO     | ***************************************
[2026-05-01 14:42:00] 2026-05-01 12:41:29,520 | INFO     | executing command: df -mP /tmp/job_11566560/atlas/pilot/slots/0
[2026-05-01 14:42:00] 2026-05-01 12:41:29,525 | INFO     | sufficient remaining disk space (224257900544 B)
[2026-05-01 14:42:00] 2026-05-01 12:41:29,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 14:42:00] 2026-05-01 12:41:29,525 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 14:42:00] 2026-05-01 12:41:29,525 | INFO     | update_server=False
[2026-05-01 14:42:00] 2026-05-01 12:41:29,525 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 14:42:00] 2026-05-01 12:41:29,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 14:42:00] 2026-05-01 12:41:29,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 14:42:00] 2026-05-01 12:41:29,547 | INFO     | all data control threads have been joined
[2026-05-01 14:42:00] 2026-05-01 12:41:29,729 | INFO     | all job control threads have been joined
[2026-05-01 14:42:00] 2026-05-01 12:41:29,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 14:42:00] 2026-05-01 12:41:29,810 | INFO     | aborting loop
[2026-05-01 14:42:00] 2026-05-01 12:41:30,531 | INFO     | [job] retrieve thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:30,531 | INFO     | [job] queue monitor thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:30,544 | INFO     | [payload] validate_post thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:30,552 | INFO     | [data] control thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:30,735 | INFO     | [job] control thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:30,800 | INFO     | all payload control threads have been joined
[2026-05-01 14:42:00] 2026-05-01 12:41:30,815 | INFO     | [job] job monitor thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,530 | INFO     | [data] copytool_out thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,611 | INFO     | [payload] failed_post thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,703 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,806 | INFO     | [payload] control thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,870 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,878 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:31,990 | INFO     | [data] copytool_in thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:32,023 | INFO     | [job] validate thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:32,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 14:42:00] 2026-05-01 12:41:36,798 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 14:42:00] 2026-05-01 12:41:53,668 | INFO     | [monitor] cgroup control has ended
[2026-05-01 14:42:00] 2026-05-01 12:41:55,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063362816)>']
[2026-05-01 14:42:00] 2026-05-01 12:41:59,989 | INFO     | PID=26820 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 14:42:00] 2026-05-01 12:41:59,990 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 14:42:00] 2026-05-01 12:41:59,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 14:42:00] 2026-05-01 12:41:59,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 14:42:00] 2026-05-01 12:41:59,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 14:42:00] 2026-05-01 12:41:59,990 | INFO     | [monitor] control thread has ended
[2026-05-01 14:42:00] 2026-05-01 12:42:00,038 | INFO     | all workflow threads have been joined
[2026-05-01 14:42:00] 2026-05-01 12:42:00,038 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 14:42:00] 2026-05-01 12:42:00,038 | INFO     | traces error code: 0
[2026-05-01 14:42:00] 2026-05-01 12:42:00,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 14:42:00] 2026-05-01 12:42:00,091 [wrapper] ==== pilot stdout END ====
[2026-05-01 14:42:00] 2026-05-01 12:42:00,093 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 14:42:00] 2026-05-01 12:42:00,094 [wrapper] pilotpid: 26820
[2026-05-01 14:42:00] 2026-05-01 12:42:00,095 [wrapper] Pilot exit status: 0
[2026-05-01 14:42:00] 2026-05-01 12:42:00,099 [wrapper] pandaids: 7122823975
[2026-05-01 14:42:00] 2026-05-01 12:42:00,121 [wrapper] cleanup supervisor_pilot 19290 26821
[2026-05-01 14:42:00] 2026-05-01 12:42:00,122 [wrapper] Test setup, not cleaning
[2026-05-01 14:42:00] 2026-05-01 12:42:00,123 [wrapper] apfmon messages muted
[2026-05-01 14:42:00] 2026-05-01 12:42:00,124 [wrapper] ==== wrapper stdout END ====
[2026-05-01 14:42:00] 2026-05-01 12:42:00,125 [wrapper] ==== wrapper stderr END ====
[2026-05-01 14:42:00]  *** Error codes and diagnostics ***
[2026-05-01 14:42:00]     "exeErrorCode": 0,
[2026-05-01 14:42:00]     "pilotErrorCode": 0,
[2026-05-01 14:42:00]  *** Listing of results directory ***
[2026-05-01 14:42:00] total 500584
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      5631 Apr 30 17:53 queuedata.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user    683926 Apr 30 17:53 pilot3.tar.gz
[2026-05-01 14:42:00] -rwx------ 1 mf493845 unix-user     36322 Apr 30 17:53 runpilot2-wrapper.sh
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user       100 May  1 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 14:42:00] -rwxr-xr-x 1 mf493845 unix-user      7986 May  1 12:16 run_atlas
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user       105 May  1 12:16 job.xml
[2026-05-01 14:42:00] -rw-r--r-- 2 mf493845 unix-user     15667 May  1 13:39 start_atlas.sh
[2026-05-01 14:42:00] drwxrwx--x 2 mf493845 unix-user       100 May  1 13:39 shared
[2026-05-01 14:42:00] -rw-r--r-- 2 mf493845 unix-user    697391 May  1 13:39 input.tar.gz
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      6307 May  1 13:39 init_data.xml
[2026-05-01 14:42:00] -rw-r--r-- 2 mf493845 unix-user 326373687 May  1 13:39 EVNT.50016980._000030.pool.root.1
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user         0 May  1 13:39 boinc_setup_complete
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      8192 May  1 13:39 boinc_mmap_file
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user         0 May  1 13:39 boinc_lockfile
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      2527 May  1 13:39 pandaJob.out
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user   1003015 May  1 13:39 agis_schedconf.cvmfs.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user   1508687 May  1 13:39 agis_ddmendpoints.agis.ALL.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user       420 May  1 13:39 workernode_map.json
[2026-05-01 14:42:00] drwx------ 5 mf493845 unix-user       520 May  1 13:39 pilot3
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user 180756496 May  1 14:41 HITS.50016984._000738.pool.root.1
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      1020 May  1 14:41 memory_monitor_summary.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user    294695 May  1 14:41 log.50016984._000738.job.log.tgz.1
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      6335 May  1 14:41 heartbeat_new.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      6225 May  1 14:41 heartbeat.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user        95 May  1 14:41 pilot_heartbeat.json
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      4759 May  1 14:42 pilotlog.txt
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user    383195 May  1 14:42 log.50016984._000738.job.log.1
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user       357 May  1 14:42 output.list
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user       410 May  1 14:42 runtime_log
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user    696320 May  1 14:42 result.tar.gz
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user      8842 May  1 14:42 runtime_log.err
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user       644 May  1 14:42 7b119b769cbb.diag
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user     21285 May  1 14:42 stderr.txt
[2026-05-01 14:42:00] HITS file was successfully produced:
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user 180756496 May  1 14:41 shared/HITS.pool.root.1
[2026-05-01 14:42:00]  *** Contents of shared directory: ***
[2026-05-01 14:42:00] total 496632
[2026-05-01 14:42:00] -rw-r--r-- 2 mf493845 unix-user     15667 May  1 13:39 start_atlas.sh
[2026-05-01 14:42:00] -rw-r--r-- 2 mf493845 unix-user    697391 May  1 13:39 input.tar.gz
[2026-05-01 14:42:00] -rw-r--r-- 2 mf493845 unix-user 326373687 May  1 13:39 ATLAS.root_0
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user 180756496 May  1 14:41 HITS.pool.root.1
[2026-05-01 14:42:00] -rw------- 1 mf493845 unix-user    696320 May  1 14:42 result.tar.gz
14:42:01 (22078): run_atlas exited; CPU time 27642.770162
14:42:01 (22078): called boinc_finish(0)

</stderr_txt>
]]>

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