Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:17 (1302469): wrapper (7.7.26015): starting
16:13:17 (1302469): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 16:13:17] Arguments: --nthreads 4
[2026-05-04 16:13:17] Threads: 4
[2026-05-04 16:13:17] Checking for CVMFS
[2026-05-04 16:13:17] No cvmfs_config command found, will try listing directly
[2026-05-04 16:13:17] CVMFS is ok
[2026-05-04 16:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 16:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 16:13:17] Further information can be found at the LHC@home message board.
[2026-05-04 16:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 16:13:17] Checking for apptainer binary...
[2026-05-04 16:13:17] which: no apptainer in ((null))
[2026-05-04 16:13:17] apptainer is not installed, using version from CVMFS
[2026-05-04 16:13:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 16:13:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-05-04 16:13:17] apptainer works
[2026-05-04 16:13:17] Set ATHENA_PROC_NUMBER=4
[2026-05-04 16:13:17] Set ATHENA_CORE_NUMBER=4
[2026-05-04 16:13:17] Starting ATLAS job with PandaID=7119958247
[2026-05-04 16:13:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 19:21:17]  *** The last 200 lines of the pilot log: ***
[2026-05-04 19:21:17] 2026-05-04 17:18:27,659 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,659 | INFO     | log transfer has been attempted: DONE
[2026-05-04 19:21:17] 2026-05-04 17:18:27,659 | INFO     | job 7119958247 has finished - writing final server update
[2026-05-04 19:21:17] 2026-05-04 17:18:27,659 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4033058/.job.ad'
[2026-05-04 19:21:17] 2026-05-04 17:18:27,659 | INFO     | total number of processed events: 400 (read)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,688 | INFO     | using path: /var/lib/boinc/var/slot104/slots/0/PanDA_Pilot-7119958247/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,689 | INFO     | extracted standard info from prmon json
[2026-05-04 19:21:17] 2026-05-04 17:18:27,689 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 19:21:17] 2026-05-04 17:18:27,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 19:21:17] 2026-05-04 17:18:27,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 19:21:17] 2026-05-04 17:18:27,693 | INFO     | fitting pss+swap vs Time
[2026-05-04 19:21:17] 2026-05-04 17:18:27,693 | INFO     | sum of square deviations: 1838657730.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,694 | INFO     | sum of deviations: 27784976497.999996
[2026-05-04 19:21:17] 2026-05-04 17:18:27,694 | INFO     | mean x (centered): 0.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,694 | INFO     | mean y: 2333195.1546961325
[2026-05-04 19:21:17] 2026-05-04 17:18:27,694 | INFO     | intersect: 2333195.1546961325
[2026-05-04 19:21:17] 2026-05-04 17:18:27,695 | INFO     | chi2: 1.4830853554675942
[2026-05-04 19:21:17] 2026-05-04 17:18:27,695 | INFO     | sum of square deviations: 1690450300.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,696 | INFO     | sum of deviations: 26927026077.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,696 | INFO     | mean x (centered): 0.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,696 | INFO     | mean y: 2332312.125
[2026-05-04 19:21:17] 2026-05-04 17:18:27,696 | INFO     | intersect: 2332312.125
[2026-05-04 19:21:17] 2026-05-04 17:18:27,697 | INFO     | chi2: 1.4839803402545402
[2026-05-04 19:21:17] 2026-05-04 17:18:27,697 | INFO     | current chi2=1.4839803402545402 (change=-0.060346141484470754 %)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,697 | INFO     | right removable region: 175
[2026-05-04 19:21:17] 2026-05-04 17:18:27,697 | INFO     | sum of square deviations: 1690450300.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,698 | INFO     | sum of deviations: 1527912536.5000005
[2026-05-04 19:21:17] 2026-05-04 17:18:27,698 | INFO     | mean x (centered): 0.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,699 | INFO     | mean y: 2359872.6079545454
[2026-05-04 19:21:17] 2026-05-04 17:18:27,699 | INFO     | intersect: 2359872.6079545454
[2026-05-04 19:21:17] 2026-05-04 17:18:27,699 | INFO     | chi2: 0.004729476634600332
[2026-05-04 19:21:17] 2026-05-04 17:18:27,699 | INFO     | current chi2=0.004729476634600332 (change=99.68110556704207 %)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,699 | INFO     | sum of square deviations: 1550429070.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,700 | INFO     | sum of deviations: 438350452.9999999
[2026-05-04 19:21:17] 2026-05-04 17:18:27,701 | INFO     | mean x (centered): 0.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,701 | INFO     | mean y: 2361037.0994152045
[2026-05-04 19:21:17] 2026-05-04 17:18:27,701 | INFO     | intersect: 2361037.0994152045
[2026-05-04 19:21:17] 2026-05-04 17:18:27,701 | INFO     | chi2: 0.00035830722016181617
[2026-05-04 19:21:17] 2026-05-04 17:18:27,701 | INFO     | current chi2=0.00035830722016181617 (change=92.42395622508249 %)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,701 | INFO     | sum of square deviations: 1418361477.5
[2026-05-04 19:21:17] 2026-05-04 17:18:27,702 | INFO     | sum of deviations: 601415714.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | mean x (centered): 0.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | mean y: 2360849.373493976
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | intersect: 2360849.373493976
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | chi2: 0.00029148184266364373
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | current chi2=0.00029148184266364373 (change=18.65030167909908 %)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | left removable region: 15
[2026-05-04 19:21:17] 2026-05-04 17:18:27,703 | INFO     | sum of square deviations: 1270051720.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,704 | INFO     | sum of deviations: 493272229.99999994
[2026-05-04 19:21:17] 2026-05-04 17:18:27,705 | INFO     | mean x (centered): 0.0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,705 | INFO     | mean y: 2360715.7125
[2026-05-04 19:21:17] 2026-05-04 17:18:27,705 | INFO     | intersect: 2360715.7125
[2026-05-04 19:21:17] 2026-05-04 17:18:27,705 | INFO     | chi2: 0.00028857133399442413
[2026-05-04 19:21:17] 2026-05-04 17:18:27,706 | INFO     | current memory leak: 0.39 B/s (using 160 data points, chi2=0.00)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,706 | INFO     | could have reported an average CPU frequency of 2696 MHz (10 samples)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | ..............................
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . Timing measurements:
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . get job = 0 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . initial setup = 8 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . payload setup = 16 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . stage-in = 0 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . payload execution = 11048 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . stage-out = 1 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | . log creation = 0 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,707 | INFO     | ..............................
[2026-05-04 19:21:17] 2026-05-04 17:18:27,807 | INFO     | 
[2026-05-04 19:21:17] 2026-05-04 17:18:27,807 | INFO     | job summary report
[2026-05-04 19:21:17] 2026-05-04 17:18:27,807 | INFO     | --------------------------------------------------
[2026-05-04 19:21:17] 2026-05-04 17:18:27,807 | INFO     | PanDA job id: 7119958247
[2026-05-04 19:21:17] 2026-05-04 17:18:27,807 | INFO     | task id: 49718416
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | errors: (none)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | pilot state: finished 
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | transexitcode: 0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | exeerrorcode: 0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | exeerrordiag: 
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | exitcode: 0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | exitmsg: OK
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | cpuconsumptiontime: 39461 s
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | nevents: 400
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | neventsw: 0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,808 | INFO     | pid: 1311859
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | pgrp: 1311859
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | corecount: 4
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | event service: False
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | sizes: {0: 2270361, 1: 2272246, 12: 2272246, 11069: 2301869, 11070: 2310947, 11074: 2311085}
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | --------------------------------------------------
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | 
[2026-05-04 19:21:17] 2026-05-04 17:18:27,809 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/0
[2026-05-04 19:21:17] 2026-05-04 17:18:27,848 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 19:21:17] 2026-05-04 17:18:27,851 | INFO     | job 7119958247 has completed (purged errors)
[2026-05-04 19:21:17] 2026-05-04 17:18:27,851 | INFO     | overall cleanup function is called
[2026-05-04 19:21:17] 2026-05-04 17:18:28,860 | INFO     | --- collectZombieJob: --- 10, [1311859]
[2026-05-04 19:21:17] 2026-05-04 17:18:28,860 | INFO     | zombie collector waiting for pid 1311859
[2026-05-04 19:21:17] 2026-05-04 17:18:28,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 19:21:17] 2026-05-04 17:18:28,860 | INFO     | collected zombie processes
[2026-05-04 19:21:17] 2026-05-04 17:18:28,860 | INFO     | will attempt to kill all subprocesses of pid=1311859
[2026-05-04 19:21:17] 2026-05-04 17:18:29,624 | INFO     | process IDs to be killed: [1311859] (in reverse order)
[2026-05-04 19:21:17] 2026-05-04 17:18:30,008 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 19:21:17] 2026-05-04 17:18:30,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 19:21:17] 2026-05-04 17:18:30,045 | INFO     | did not find any defunct processes belonging to 1311859
[2026-05-04 19:21:17] 2026-05-04 17:18:30,074 | INFO     | did not find any defunct processes belonging to 1311859
[2026-05-04 19:21:17] 2026-05-04 17:18:30,074 | INFO     | Ready for new job
[2026-05-04 19:21:17] 2026-05-04 17:18:30,076 | INFO     | ***************************************
[2026-05-04 19:21:17] 2026-05-04 17:18:30,076 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 19:21:17] 2026-05-04 17:18:30,077 | INFO     | ***************************************
[2026-05-04 19:21:17] 2026-05-04 17:18:30,077 | INFO     | 
[2026-05-04 19:21:17] 2026-05-04 17:18:30,085 | INFO     | architecture information:
[2026-05-04 19:21:17] 2026-05-04 17:18:30,086 | INFO     | executing command: cat /etc/os-release
[2026-05-04 19:21:17] 2026-05-04 17:18:30,116 | INFO     | cat /etc/os-release:
[2026-05-04 19:21:17] NAME="CentOS Linux"
[2026-05-04 19:21:17] VERSION="7 (Core)"
[2026-05-04 19:21:17] ID="centos"
[2026-05-04 19:21:17] ID_LIKE="rhel fedora"
[2026-05-04 19:21:17] VERSION_ID="7"
[2026-05-04 19:21:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 19:21:17] ANSI_COLOR="0;31"
[2026-05-04 19:21:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 19:21:17] HOME_URL="https://www.centos.org/"
[2026-05-04 19:21:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 19:21:17] 
[2026-05-04 19:21:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 19:21:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 19:21:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 19:21:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 19:21:17] 
[2026-05-04 19:21:17] 2026-05-04 17:18:30,117 | INFO     | ***************************************
[2026-05-04 19:21:17] 2026-05-04 17:18:30,619 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/0
[2026-05-04 19:21:17] 2026-05-04 17:18:30,652 | INFO     | sufficient remaining disk space (241053990912 B)
[2026-05-04 19:21:17] 2026-05-04 17:18:30,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 19:21:17] 2026-05-04 17:18:30,652 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 19:21:17] 2026-05-04 17:18:30,652 | INFO     | update_server=False
[2026-05-04 19:21:17] 2026-05-04 17:18:30,652 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 19:21:17] 2026-05-04 17:18:30,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 19:21:17] 2026-05-04 17:18:30,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 19:21:17] 2026-05-04 17:18:30,653 | INFO     | aborting loop
[2026-05-04 19:21:17] 2026-05-04 17:18:30,924 | INFO     | all job control threads have been joined
[2026-05-04 19:21:17] 2026-05-04 17:18:31,657 | INFO     | [job] retrieve thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:31,658 | INFO     | [job] job monitor thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:31,661 | INFO     | all data control threads have been joined
[2026-05-04 19:21:17] 2026-05-04 17:18:31,823 | INFO     | all payload control threads have been joined
[2026-05-04 19:21:17] 2026-05-04 17:18:31,929 | INFO     | [job] control thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:32,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 19:21:17] 2026-05-04 17:18:32,307 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:32,312 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:32,517 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:32,597 | INFO     | [payload] failed_post thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:32,666 | INFO     | [data] control thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:32,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 19:21:17] 2026-05-04 17:18:32,828 | INFO     | [payload] control thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:33,076 | INFO     | [data] copytool_in thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:33,125 | INFO     | [job] validate thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:33,244 | INFO     | [payload] validate_post thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:33,821 | INFO     | [job] queue monitor thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:34,114 | INFO     | [data] copytool_out thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:34,658 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:18:41,551 | INFO     | job.realtimelogging is not enabled
[2026-05-04 19:21:17] 2026-05-04 17:18:42,556 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 19:21:17] 2026-05-04 17:19:00,492 | INFO     | [monitor] cgroup control has ended
[2026-05-04 19:21:17] 2026-05-04 17:19:00,508 | INFO     | PID=1306547 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 19:21:17] 2026-05-04 17:19:00,509 | INFO     | .. there are 23 such processes running
[2026-05-04 19:21:17] 2026-05-04 17:19:00,510 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 19:21:17] 2026-05-04 17:19:00,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 19:21:17] 2026-05-04 17:19:00,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 19:21:17] 2026-05-04 17:19:01,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23029767411520)>', '<ExcThread(monitor, started 23029460772608)>']
[2026-05-04 19:21:17] 2026-05-04 17:19:01,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 19:21:17] 2026-05-04 17:19:01,515 | INFO     | [monitor] control thread has ended
[2026-05-04 19:21:17] 2026-05-04 17:19:06,099 | INFO     | all workflow threads have been joined
[2026-05-04 19:21:17] 2026-05-04 17:19:06,099 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 19:21:17] 2026-05-04 17:19:06,099 | INFO     | traces error code: 0
[2026-05-04 19:21:17] 2026-05-04 17:19:06,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 19:21:17] 2026-05-04 17:19:06,314 [wrapper] ==== pilot stdout END ====
[2026-05-04 19:21:17] 2026-05-04 17:19:06,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 19:21:17] 2026-05-04 17:19:06,321 [wrapper] pilotpid: 1306547
[2026-05-04 19:21:17] 2026-05-04 17:19:06,324 [wrapper] Pilot exit status: 0
[2026-05-04 19:21:17] 2026-05-04 17:19:06,374 [wrapper] pandaids: 7119958247
[2026-05-04 19:21:17] 2026-05-04 17:19:06,613 [wrapper] cleanup supervisor_pilot 1961175 1306548
[2026-05-04 19:21:17] 2026-05-04 17:19:06,617 [wrapper] Test setup, not cleaning
[2026-05-04 19:21:17] 2026-05-04 17:19:06,622 [wrapper] apfmon messages muted
[2026-05-04 19:21:17] 2026-05-04 17:19:06,625 [wrapper] ==== wrapper stdout END ====
[2026-05-04 19:21:17] 2026-05-04 17:19:06,629 [wrapper] ==== wrapper stderr END ====
[2026-05-04 19:21:17]  *** Error codes and diagnostics ***
[2026-05-04 19:21:17]     "exeErrorCode": 0,
[2026-05-04 19:21:17]     "pilotErrorCode": 0,
[2026-05-04 19:21:17]  *** Listing of results directory ***
[2026-05-04 19:21:17] total 624100
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc    683926 May  1 09:25 pilot3.tar.gz
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc      5631 May  1 09:25 queuedata.json
[2026-05-04 19:21:17] -rwx------. 1 boinc boinc     36322 May  1 09:25 runpilot2-wrapper.sh
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc       100 May  4 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 19:21:17] -rwxr-xr-x. 1 boinc boinc      7986 May  4 16:13 run_atlas
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc       105 May  4 16:13 job.xml
[2026-05-04 19:21:17] -rw-r--r--. 2 boinc boinc 440763978 May  4 16:13 EVNT.46373187._000047.pool.root.1
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc      6542 May  4 16:13 init_data.xml
[2026-05-04 19:21:17] drwxrwx--x. 2 boinc boinc      4096 May  4 16:13 shared
[2026-05-04 19:21:17] -rw-r--r--. 2 boinc boinc    697429 May  4 16:13 input.tar.gz
[2026-05-04 19:21:17] -rw-r--r--. 2 boinc boinc     15667 May  4 16:13 start_atlas.sh
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc         0 May  4 16:13 boinc_lockfile
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc      2595 May  4 16:13 pandaJob.out
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc   1002539 May  4 16:13 agis_schedconf.cvmfs.json
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc       440 May  4 16:13 workernode_map.json
[2026-05-04 19:21:17] drwx------. 5 boinc boinc      4096 May  4 16:13 pilot3
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc 191492048 May  4 19:17 HITS.49718416._013494.pool.root.1
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc       488 May  4 19:17 boinc_task_state.xml
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc        95 May  4 19:18 pilot_heartbeat.json
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc      1027 May  4 19:18 memory_monitor_summary.json
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc   1505918 May  4 19:18 agis_ddmendpoints.agis.ALL.json
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc    332489 May  4 19:18 log.49718416._013494.job.log.tgz.1
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc      6371 May  4 19:18 heartbeat_new.json
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc      6262 May  4 19:18 heartbeat.json
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc      4906 May  4 19:19 pilotlog.txt
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc   1009967 May  4 19:19 log.49718416._013494.job.log.1
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc       357 May  4 19:19 output.list
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc       410 May  4 19:19 runtime_log
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc   1361920 May  4 19:19 result.tar.gz
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc      8845 May  4 19:19 runtime_log.err
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc       662 May  4 19:19 5571f59b8f60.diag
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc      8192 May  4 19:21 boinc_mmap_file
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc        27 May  4 19:21 wrapper_checkpoint.txt
[2026-05-04 19:21:17] -rw-r--r--. 1 boinc boinc     20816 May  4 19:21 stderr.txt
[2026-05-04 19:21:17] HITS file was successfully produced:
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc 191492048 May  4 19:17 shared/HITS.pool.root.1
[2026-05-04 19:21:17]  *** Contents of shared directory: ***
[2026-05-04 19:21:17] total 619480
[2026-05-04 19:21:17] -rw-r--r--. 2 boinc boinc 440763978 May  4 16:13 ATLAS.root_0
[2026-05-04 19:21:17] -rw-r--r--. 2 boinc boinc    697429 May  4 16:13 input.tar.gz
[2026-05-04 19:21:17] -rw-r--r--. 2 boinc boinc     15667 May  4 16:13 start_atlas.sh
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc 191492048 May  4 19:17 HITS.pool.root.1
[2026-05-04 19:21:17] -rw-------. 1 boinc boinc   1361920 May  4 19:19 result.tar.gz
19:21:19 (1302469): run_atlas exited; CPU time 40101.425986
19:21:19 (1302469): called boinc_finish(0)

</stderr_txt>
]]>

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