Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:35:54 (4166832): wrapper (7.7.26015): starting
12:35:54 (4166832): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 12:35:54] Arguments: --nthreads 4
[2026-05-04 12:35:54] Threads: 4
[2026-05-04 12:35:54] Checking for CVMFS
[2026-05-04 12:35:54] No cvmfs_config command found, will try listing directly
[2026-05-04 12:35:54] CVMFS is ok
[2026-05-04 12:35:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 12:35:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 12:35:54] Further information can be found at the LHC@home message board.
[2026-05-04 12:35:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 12:35:54] Checking for apptainer binary...
[2026-05-04 12:35:54] which: no apptainer in ((null))
[2026-05-04 12:35:54] apptainer is not installed, using version from CVMFS
[2026-05-04 12:35:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 12:35:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-04 12:35:55] apptainer works
[2026-05-04 12:35:55] Set ATHENA_PROC_NUMBER=4
[2026-05-04 12:35:55] Set ATHENA_CORE_NUMBER=4
[2026-05-04 12:35:55] Starting ATLAS job with PandaID=7124205262
[2026-05-04 12:35:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 15:44:51]  *** The last 200 lines of the pilot log: ***
[2026-05-04 15:44:51] 2026-05-04 13:44:00,518 | INFO     | stage-out finished correctly
[2026-05-04 15:44:51] 2026-05-04 13:44:01,354 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 15:44:51] 2026-05-04 13:44:01,459 | INFO     | job 7124205262 has state=finished
[2026-05-04 15:44:51] 2026-05-04 13:44:01,459 | INFO     | preparing for final server update for job 7124205262 in state='finished'
[2026-05-04 15:44:51] 2026-05-04 13:44:01,459 | INFO     | reading metadata from: /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7124205262/jobReport.json
[2026-05-04 15:44:51] 2026-05-04 13:44:01,462 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot84/slots/0/workernode_map.json
[2026-05-04 15:44:51] 2026-05-04 13:44:01,462 | INFO     | this job has now completed (state=finished)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,462 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,462 | INFO     | log transfer has been attempted: DONE
[2026-05-04 15:44:51] 2026-05-04 13:44:01,463 | INFO     | job 7124205262 has finished - writing final server update
[2026-05-04 15:44:51] 2026-05-04 13:44:01,464 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2923404/.job.ad'
[2026-05-04 15:44:51] 2026-05-04 13:44:01,464 | INFO     | total number of processed events: 400 (read)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,490 | INFO     | using path: /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7124205262/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,491 | INFO     | extracted standard info from prmon json
[2026-05-04 15:44:51] 2026-05-04 13:44:01,491 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 15:44:51] 2026-05-04 13:44:01,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 15:44:51] 2026-05-04 13:44:01,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 15:44:51] 2026-05-04 13:44:01,495 | INFO     | fitting pss+swap vs Time
[2026-05-04 15:44:51] 2026-05-04 13:44:01,496 | INFO     | sum of square deviations: 1931608310.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,497 | INFO     | sum of deviations: -10376182563.499998
[2026-05-04 15:44:51] 2026-05-04 13:44:01,497 | INFO     | mean x (centered): 0.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,497 | INFO     | mean y: 2345354.929347826
[2026-05-04 15:44:51] 2026-05-04 13:44:01,497 | INFO     | intersect: 2345354.929347826
[2026-05-04 15:44:51] 2026-05-04 13:44:01,497 | INFO     | chi2: 1.5455200817139707
[2026-05-04 15:44:51] 2026-05-04 13:44:01,498 | INFO     | sum of square deviations: 1778377530.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,499 | INFO     | sum of deviations: -10050098920.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,499 | INFO     | mean x (centered): 0.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,499 | INFO     | mean y: 2345679.5363128493
[2026-05-04 15:44:51] 2026-05-04 13:44:01,499 | INFO     | intersect: 2345679.5363128493
[2026-05-04 15:44:51] 2026-05-04 13:44:01,500 | INFO     | chi2: 1.5439426331584216
[2026-05-04 15:44:51] 2026-05-04 13:44:01,500 | INFO     | current chi2=1.5439426331584216 (change=0.10206587246667859 %)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,500 | INFO     | right removable region: 178
[2026-05-04 15:44:51] 2026-05-04 13:44:01,500 | INFO     | sum of square deviations: 1778377530.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,501 | INFO     | sum of deviations: -30088079383.000004
[2026-05-04 15:44:51] 2026-05-04 13:44:01,501 | INFO     | mean x (centered): 0.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,501 | INFO     | mean y: 2364592.932960894
[2026-05-04 15:44:51] 2026-05-04 13:44:01,501 | INFO     | intersect: 2364592.932960894
[2026-05-04 15:44:51] 2026-05-04 13:44:01,502 | INFO     | chi2: 0.22781349651637753
[2026-05-04 15:44:51] 2026-05-04 13:44:01,502 | INFO     | current chi2=0.22781349651637753 (change=85.25975176823752 %)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,502 | INFO     | sum of square deviations: 1633472487.5
[2026-05-04 15:44:51] 2026-05-04 13:44:01,503 | INFO     | sum of deviations: -22551092104.5
[2026-05-04 15:44:51] 2026-05-04 13:44:01,503 | INFO     | mean x (centered): 0.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,503 | INFO     | mean y: 2356655.2816091953
[2026-05-04 15:44:51] 2026-05-04 13:44:01,503 | INFO     | intersect: 2356655.2816091953
[2026-05-04 15:44:51] 2026-05-04 13:44:01,503 | INFO     | chi2: 0.19696003003996831
[2026-05-04 15:44:51] 2026-05-04 13:44:01,504 | INFO     | current chi2=0.19696003003996831 (change=13.543300527934768 %)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,504 | INFO     | left removable region: 10
[2026-05-04 15:44:51] 2026-05-04 13:44:01,504 | INFO     | sum of square deviations: 1470248962.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,505 | INFO     | sum of deviations: -21821237444.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,505 | INFO     | mean x (centered): 0.0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,505 | INFO     | mean y: 2357473.8928571427
[2026-05-04 15:44:51] 2026-05-04 13:44:01,505 | INFO     | intersect: 2357473.8928571427
[2026-05-04 15:44:51] 2026-05-04 13:44:01,505 | INFO     | chi2: 0.1939060507781654
[2026-05-04 15:44:51] 2026-05-04 13:44:01,506 | INFO     | current memory leak: -14.84 B/s (using 168 data points, chi2=0.19)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,506 | INFO     | could have reported an average CPU frequency of 2700 MHz (10 samples)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | ..............................
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . Timing measurements:
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . get job = 0 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . initial setup = 11 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . payload setup = 18 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . stage-in = 0 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . payload execution = 11219 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . stage-out = 1 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | . log creation = 0 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,507 | INFO     | ..............................
[2026-05-04 15:44:51] 2026-05-04 13:44:01,960 | INFO     | 
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | job summary report
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | --------------------------------------------------
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | PanDA job id: 7124205262
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | task id: 49963754
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | errors: (none)
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | pilot state: finished 
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | transexitcode: 0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | exeerrorcode: 0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | exeerrordiag: 
[2026-05-04 15:44:51] 2026-05-04 13:44:01,961 | INFO     | exitcode: 0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | exitmsg: OK
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | cpuconsumptiontime: 42189 s
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | nevents: 400
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | neventsw: 0
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | pid: 4176689
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | pgrp: 4176689
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | corecount: 4
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | event service: False
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | sizes: {0: 2270391, 1: 2272163, 11: 2272163, 11241: 2302125, 11242: 2302124, 11243: 2311379, 11244: 2311517}
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | --------------------------------------------------
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | 
[2026-05-04 15:44:51] 2026-05-04 13:44:01,962 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/0
[2026-05-04 15:44:51] 2026-05-04 13:44:02,000 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,000 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,000 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,000 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,000 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,002 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 15:44:51] 2026-05-04 13:44:02,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,002 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 15:44:51] 2026-05-04 13:44:02,002 | INFO     | job 7124205262 has completed (purged errors)
[2026-05-04 15:44:51] 2026-05-04 13:44:02,002 | INFO     | overall cleanup function is called
[2026-05-04 15:44:51] 2026-05-04 13:44:03,011 | INFO     | --- collectZombieJob: --- 10, [4176689]
[2026-05-04 15:44:51] 2026-05-04 13:44:03,011 | INFO     | zombie collector waiting for pid 4176689
[2026-05-04 15:44:51] 2026-05-04 13:44:03,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 15:44:51] 2026-05-04 13:44:03,011 | INFO     | collected zombie processes
[2026-05-04 15:44:51] 2026-05-04 13:44:03,011 | INFO     | will attempt to kill all subprocesses of pid=4176689
[2026-05-04 15:44:51] 2026-05-04 13:44:03,615 | INFO     | process IDs to be killed: [4176689] (in reverse order)
[2026-05-04 15:44:51] 2026-05-04 13:44:03,938 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 15:44:51] 2026-05-04 13:44:03,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 15:44:51] 2026-05-04 13:44:03,969 | INFO     | did not find any defunct processes belonging to 4176689
[2026-05-04 15:44:51] 2026-05-04 13:44:03,996 | INFO     | did not find any defunct processes belonging to 4176689
[2026-05-04 15:44:51] 2026-05-04 13:44:03,996 | INFO     | Ready for new job
[2026-05-04 15:44:51] 2026-05-04 13:44:03,998 | INFO     | ***************************************
[2026-05-04 15:44:51] 2026-05-04 13:44:03,998 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 15:44:51] 2026-05-04 13:44:03,998 | INFO     | ***************************************
[2026-05-04 15:44:51] 2026-05-04 13:44:03,999 | INFO     | 
[2026-05-04 15:44:51] 2026-05-04 13:44:04,007 | INFO     | architecture information:
[2026-05-04 15:44:51] 2026-05-04 13:44:04,007 | INFO     | executing command: cat /etc/os-release
[2026-05-04 15:44:51] 2026-05-04 13:44:04,029 | INFO     | cat /etc/os-release:
[2026-05-04 15:44:51] NAME="CentOS Linux"
[2026-05-04 15:44:51] VERSION="7 (Core)"
[2026-05-04 15:44:51] ID="centos"
[2026-05-04 15:44:51] ID_LIKE="rhel fedora"
[2026-05-04 15:44:51] VERSION_ID="7"
[2026-05-04 15:44:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 15:44:51] ANSI_COLOR="0;31"
[2026-05-04 15:44:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 15:44:51] HOME_URL="https://www.centos.org/"
[2026-05-04 15:44:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 15:44:51] 
[2026-05-04 15:44:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 15:44:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 15:44:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 15:44:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 15:44:51] 
[2026-05-04 15:44:51] 2026-05-04 13:44:04,030 | INFO     | ***************************************
[2026-05-04 15:44:51] 2026-05-04 13:44:04,533 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/0
[2026-05-04 15:44:51] 2026-05-04 13:44:04,560 | INFO     | sufficient remaining disk space (244997685248 B)
[2026-05-04 15:44:51] 2026-05-04 13:44:04,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 15:44:51] 2026-05-04 13:44:04,561 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 15:44:51] 2026-05-04 13:44:04,561 | INFO     | update_server=False
[2026-05-04 15:44:51] 2026-05-04 13:44:04,561 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 15:44:51] 2026-05-04 13:44:04,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 15:44:51] 2026-05-04 13:44:04,623 | INFO     | job.realtimelogging is not enabled
[2026-05-04 15:44:51] 2026-05-04 13:44:05,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 15:44:51] 2026-05-04 13:44:05,478 | INFO     | aborting loop
[2026-05-04 15:44:51] 2026-05-04 13:44:05,497 | INFO     | all data control threads have been joined
[2026-05-04 15:44:51] 2026-05-04 13:44:05,566 | INFO     | [job] retrieve thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:05,579 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:05,598 | INFO     | [job] validate thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:05,628 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:05,805 | INFO     | all payload control threads have been joined
[2026-05-04 15:44:51] 2026-05-04 13:44:06,208 | INFO     | all job control threads have been joined
[2026-05-04 15:44:51] 2026-05-04 13:44:06,448 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:06,483 | INFO     | [job] job monitor thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:06,502 | INFO     | [data] control thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:06,566 | INFO     | [data] copytool_out thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:06,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 15:44:51] 2026-05-04 13:44:06,807 | INFO     | [payload] control thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:06,956 | INFO     | [payload] validate_post thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:06,978 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:07,018 | INFO     | [data] copytool_in thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:07,066 | INFO     | [payload] failed_post thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:07,213 | INFO     | [job] control thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:07,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 15:44:51] 2026-05-04 13:44:07,613 | INFO     | [job] queue monitor thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:11,464 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 15:44:51] 2026-05-04 13:44:34,226 | INFO     | PID=4171279 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 15:44:51] 2026-05-04 13:44:34,226 | INFO     | .. there are 22 such processes running
[2026-05-04 15:44:51] 2026-05-04 13:44:34,228 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 15:44:51] 2026-05-04 13:44:34,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 15:44:51] 2026-05-04 13:44:34,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 15:44:51] 2026-05-04 13:44:45,313 | INFO     | [monitor] cgroup control has ended
[2026-05-04 15:44:51] 2026-05-04 13:44:46,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23062690891584)>', '<ExcThread(monitor, started 23062448965376)>']
[2026-05-04 15:44:51] 2026-05-04 13:44:47,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 15:44:51] 2026-05-04 13:44:47,293 | INFO     | [monitor] control thread has ended
[2026-05-04 15:44:51] 2026-05-04 13:44:51,405 | INFO     | all workflow threads have been joined
[2026-05-04 15:44:51] 2026-05-04 13:44:51,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 15:44:51] 2026-05-04 13:44:51,406 | INFO     | traces error code: 0
[2026-05-04 15:44:51] 2026-05-04 13:44:51,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 15:44:51] 2026-05-04 13:44:51,548 [wrapper] ==== pilot stdout END ====
[2026-05-04 15:44:51] 2026-05-04 13:44:51,552 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 15:44:51] 2026-05-04 13:44:51,555 [wrapper] pilotpid: 4171279
[2026-05-04 15:44:51] 2026-05-04 13:44:51,559 [wrapper] Pilot exit status: 0
[2026-05-04 15:44:51] 2026-05-04 13:44:51,576 [wrapper] pandaids: 7124205262
[2026-05-04 15:44:51] 2026-05-04 13:44:51,782 [wrapper] cleanup supervisor_pilot  385743 4171280
[2026-05-04 15:44:51] 2026-05-04 13:44:51,787 [wrapper] Test setup, not cleaning
[2026-05-04 15:44:51] 2026-05-04 13:44:51,790 [wrapper] apfmon messages muted
[2026-05-04 15:44:51] 2026-05-04 13:44:51,794 [wrapper] ==== wrapper stdout END ====
[2026-05-04 15:44:51] 2026-05-04 13:44:51,796 [wrapper] ==== wrapper stderr END ====
[2026-05-04 15:44:51]  *** Error codes and diagnostics ***
[2026-05-04 15:44:51]     "exeErrorCode": 0,
[2026-05-04 15:44:51]     "pilotErrorCode": 0,
[2026-05-04 15:44:51]  *** Listing of results directory ***
[2026-05-04 15:44:51] total 380656
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc    683926 May  1 07:36 pilot3.tar.gz
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc      5631 May  1 07:39 queuedata.json
[2026-05-04 15:44:51] -rwx------. 1 boinc boinc     36322 May  1 07:40 runpilot2-wrapper.sh
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc       100 May  4 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 15:44:51] -rwxr-xr-x. 1 boinc boinc      7986 May  4 12:35 run_atlas
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc       105 May  4 12:35 job.xml
[2026-05-04 15:44:51] -rw-r--r--. 2 boinc boinc 201232929 May  4 12:35 EVNT.49963752._000011.pool.root.1
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc      6541 May  4 12:35 init_data.xml
[2026-05-04 15:44:51] -rw-r--r--. 2 boinc boinc     15667 May  4 12:35 start_atlas.sh
[2026-05-04 15:44:51] drwxrwx--x. 2 boinc boinc      4096 May  4 12:35 shared
[2026-05-04 15:44:51] -rw-r--r--. 2 boinc boinc    697385 May  4 12:35 input.tar.gz
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc         0 May  4 12:35 boinc_lockfile
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc      2496 May  4 12:35 pandaJob.out
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc   1002664 May  4 12:36 agis_schedconf.cvmfs.json
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc       443 May  4 12:36 workernode_map.json
[2026-05-04 15:44:51] drwx------. 5 boinc boinc      4096 May  4 12:36 pilot3
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc 181751498 May  4 15:43 HITS.49963754._000260.pool.root.1
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc       487 May  4 15:43 boinc_task_state.xml
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc      1044 May  4 15:43 memory_monitor_summary.json
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc   1505918 May  4 15:43 agis_ddmendpoints.agis.ALL.json
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc    296164 May  4 15:44 log.49963754._000260.job.log.tgz.1
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc      6369 May  4 15:44 heartbeat_new.json
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc      6260 May  4 15:44 heartbeat.json
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc        95 May  4 15:44 pilot_heartbeat.json
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc      8192 May  4 15:44 boinc_mmap_file
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc        27 May  4 15:44 wrapper_checkpoint.txt
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc      4905 May  4 15:44 pilotlog.txt
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc   1042604 May  4 15:44 log.49963754._000260.job.log.1
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc       357 May  4 15:44 output.list
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc       410 May  4 15:44 runtime_log
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc   1351680 May  4 15:44 result.tar.gz
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc      8828 May  4 15:44 runtime_log.err
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc       665 May  4 15:44 3ce325aa5c5b.diag
[2026-05-04 15:44:51] -rw-r--r--. 1 boinc boinc     21032 May  4 15:44 stderr.txt
[2026-05-04 15:44:51] HITS file was successfully produced:
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc 181751498 May  4 15:43 shared/HITS.pool.root.1
[2026-05-04 15:44:51]  *** Contents of shared directory: ***
[2026-05-04 15:44:51] total 376040
[2026-05-04 15:44:51] -rw-r--r--. 2 boinc boinc 201232929 May  4 12:35 ATLAS.root_0
[2026-05-04 15:44:51] -rw-r--r--. 2 boinc boinc     15667 May  4 12:35 start_atlas.sh
[2026-05-04 15:44:51] -rw-r--r--. 2 boinc boinc    697385 May  4 12:35 input.tar.gz
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc 181751498 May  4 15:43 HITS.pool.root.1
[2026-05-04 15:44:51] -rw-------. 1 boinc boinc   1351680 May  4 15:44 result.tar.gz
15:44:53 (4166832): run_atlas exited; CPU time 42836.707403
15:44:53 (4166832): called boinc_finish(0)

</stderr_txt>
]]>

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